RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.25□□□□□ -0.45
HNF4A-201ENST00000316099 ANKRD2Q9GZV1 360 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 LMO7Q8WWI1 1683 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 MAGEB6P1A0A0J9YX57 407 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 PRC1O43663 620 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 ERFEQ4G0M1 354 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 IPO4Q8TEX9 1081 aaKnown RBP12.25□□□□□ -0.45
HNF4A-201ENST00000316099 MRPS27Q92552 414 aaKnown RBP12.25□□□□□ -0.45
HNF4A-201ENST00000316099 RNF41Q9H4P4 317 aaPredicted RBP12.25□□□□□ -0.45
HNF4A-201ENST00000316099 MBD4O95243 580 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 PDE8BO95263 885 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 IBSPP21815 317 aaPredicted RBP12.24□□□□□ -0.45
HNF4A-201ENST00000316099 TTC31Q49AM3 519 aaPredicted RBP12.24□□□□□ -0.45
HNF4A-201ENST00000316099 ANTXR1Q9H6X2 564 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 TUBBP07437 444 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 POTEJP0CG39 1038 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 ADCK5Q3MIX3 580 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 ZNF532Q9HCE3 1301 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 IRX3P78415 501 aaPredicted RBP12.24□□□□□ -0.45
HNF4A-201ENST00000316099 HLTFQ14527 1009 aaKnown RBP eCLIP12.24□□□□□ -0.453e-7■□□□□ 8.9
HNF4A-201ENST00000316099 ZNF622Q969S3 477 aaKnown RBP eCLIP12.24□□□□□ -0.45
HNF4A-201ENST00000316099 NBPF11Q86T75 865 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 MICU3Q86XE3 530 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 CCDC82Q8N4S0 544 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 KAZALD1Q96I82 304 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 DNAJC25Q9H1X3 360 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 ARMT1Q9H993 441 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 DACT1Q9NYF0 836 aa12.24□□□□□ -0.45
HNF4A-201ENST00000316099 GABPB1Q06547 395 aaPredicted RBP12.23□□□□□ -0.45
HNF4A-201ENST00000316099 MAP4K1Q92918 833 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 JADE2Q9NQC1 790 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 AFF2P51816 1311 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 SYT1P21579 422 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 SYKP43405 635 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 PHKA1P46020 1223 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 CHRNDQ07001 517 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 TDRD12Q587J7 1177 aaKnown RBP12.23□□□□□ -0.45
HNF4A-201ENST00000316099 RAB34Q9BZG1 259 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 RMND1Q9NWS8 449 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 FAM208AQ9UK61 1670 aaKnown RBP12.23□□□□□ -0.45
HNF4A-201ENST00000316099 POLR3DP05423 398 aaPredicted RBP12.23□□□□□ -0.45
HNF4A-201ENST00000316099 CAPN2P17655 700 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 MTIF2P46199 727 aaKnown RBP12.23□□□□□ -0.45
HNF4A-201ENST00000316099 SPTY2D1Q68D10 685 aaPredicted RBP12.23□□□□□ -0.45
HNF4A-201ENST00000316099 AOPEPQ8N6M6 819 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 ERO1AQ96HE7 468 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 KIF2CQ99661 725 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 LIG1P18858 919 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 METAP2P50579 478 aaKnown RBP eCLIP12.23□□□□□ -0.45
HNF4A-201ENST00000316099 BCAMP50895 628 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 TMEM132AQ24JP5 1023 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 SEPT12Q8IYM1 358 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 MYRIPQ8NFW9 859 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 DSCC1Q9BVC3 393 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 SRP68Q9UHB9 627 aaKnown RBP12.23□□□□□ -0.45
HNF4A-201ENST00000316099 COL15A1P39059 1388 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 PTGS1P23219 599 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 SPECC1Q5M775 1068 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
HNF4A-201ENST00000316099 TM6SF1Q9BZW5 370 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 ORC3Q9UBD5 711 aaPredicted RBP12.22□□□□□ -0.45
HNF4A-201ENST00000316099 NSFL1CQ9UNZ2 370 aaKnown RBP12.22□□□□□ -0.45
HNF4A-201ENST00000316099 CTAGE9A4FU28 777 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 DESP17661 470 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 AMPD3Q01432 767 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 VPS72Q15906 364 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 ZSWIM4Q9H7M6 989 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 DENND2AQ9ULE3 1009 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 IARSP41252 1262 aaKnown RBP12.22□□□□□ -0.45
HNF4A-201ENST00000316099 ZNF445P59923 1031 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 IFI16Q16666 785 aaKnown RBP12.22□□□□□ -0.45
HNF4A-201ENST00000316099 PI16Q6UXB8 463 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 BARGINQ6ZT62 677 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
HNF4A-201ENST00000316099 RASSF4Q9H2L5 321 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 PHRF1Q9P1Y6 1649 aaKnown RBP12.22□□□□□ -0.45
HNF4A-201ENST00000316099 CACNA1FO60840 1977 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 M0R2C6 588 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 CYLC1P35663 651 aaPredicted RBP12.22□□□□□ -0.45
HNF4A-201ENST00000316099 DNM1Q05193 864 aaKnown RBP12.22□□□□□ -0.45
HNF4A-201ENST00000316099 PKP1Q13835 747 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 ZNF287Q9HBT7 754 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 SEC63Q9UGP8 760 aaKnown RBP12.22□□□□□ -0.45
HNF4A-201ENST00000316099 CDHR2Q9BYE9 1310 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 HSPD1P10809 573 aaKnown RBP12.22□□□□□ -0.45
HNF4A-201ENST00000316099 SPAG1Q07617 926 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 TMEM266Q2M3C6 531 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 ATG9AQ7Z3C6 839 aa12.22□□□□□ -0.45
HNF4A-201ENST00000316099 CRNKL1Q9BZJ0 848 aaKnown RBP12.22□□□□□ -0.45
HNF4A-201ENST00000316099 NSRP1Q9H0G5 558 aaKnown RBP12.22□□□□□ -0.45
HNF4A-201ENST00000316099 USP42Q9H9J4 1324 aaKnown RBP12.22□□□□□ -0.45
HNF4A-201ENST00000316099 TRIM37O94972 964 aa12.21□□□□□ -0.45
HNF4A-201ENST00000316099 GNAT2P19087 354 aa12.21□□□□□ -0.45
HNF4A-201ENST00000316099 ZNF804AQ7Z570 1209 aa12.21□□□□□ -0.45
HNF4A-201ENST00000316099 KRT23Q9C075 422 aa12.21□□□□□ -0.45
HNF4A-201ENST00000316099 MKNK2Q9HBH9 465 aa12.21□□□□□ -0.45
HNF4A-201ENST00000316099 ME3Q16798 604 aa12.21□□□□□ -0.45
HNF4A-201ENST00000316099 SLFNL1Q499Z3 407 aa12.21□□□□□ -0.45
HNF4A-201ENST00000316099 WWC2Q6AWC2 1192 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms