RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 APPBP2Q92624 585 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 SEC62Q99442 399 aaKnown RBP10.25□□□□□ -0.77
CTC1-201ENST00000315684 CDC42BPAQ5VT25 1732 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 UBN2Q6ZU65 1347 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 DIXDC1Q155Q3 683 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 KCTD1Q719H9 257 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 FAM135BQ49AJ0 1406 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 CDC42BPGQ6DT37 1551 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 CBFA2T2O43439 604 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 PRAMEF18Q5VWM3 479 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 NLRP10Q86W26 655 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 TBC1D7Q9P0N9 293 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 TTC41PQ6P2S7 1318 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 ECE2O60344 883 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 KRT13P13646 458 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 VWA3AA6NCI4 1184 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 SMTNL1A8MU46 457 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 BBOX1O75936 387 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 CCT6AP40227 531 aaKnown RBP10.24□□□□□ -0.77
CTC1-201ENST00000315684 PDE4DQ08499 809 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 PRPF4BQ13523 1007 aaKnown RBP10.24□□□□□ -0.77
CTC1-201ENST00000315684 GIGYF2Q6Y7W6 1299 aaKnown RBP10.24□□□□□ -0.77
CTC1-201ENST00000315684 TMEM110-MUSTN1A8MSY1 372 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 PER1O15534 1290 aaPredicted RBP10.24□□□□□ -0.77
CTC1-201ENST00000315684 FGFR1OPO95684 399 aaKnown RBP10.24□□□□□ -0.77
CTC1-201ENST00000315684 FAM193AP78312 1265 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 HELLSQ9NRZ9 838 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 RTEL1Q9NZ71 1219 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 SHROOM2Q13796 1616 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 TMEM232C9JQI7 657 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 KRT26Q7Z3Y9 468 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 ZHX1Q9UKY1 873 aaPredicted RBP10.24□□□□□ -0.77
CTC1-201ENST00000315684 ARHGEF6Q15052 776 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 SPECC1Q5M775 1068 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 IL27Q8NEV9 243 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 MYO6Q9UM54 1294 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 FAM196BA6NMK8 535 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 ABL1P00519 1130 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 APOL6Q9BWW8 343 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 CCPG1Q9ULG6 757 aa10.24□□□□□ -0.77
CTC1-201ENST00000315684 SESTD1Q86VW0 696 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 PPARAQ07869 468 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 VPS72Q15906 364 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 TDRD3Q9H7E2 651 aaKnown RBP10.23□□□□□ -0.77
CTC1-201ENST00000315684 ZBTB7BO15156 539 aaPredicted RBP10.23□□□□□ -0.77
CTC1-201ENST00000315684 NOP2P46087 812 aaKnown RBP10.23□□□□□ -0.77
CTC1-201ENST00000315684 SPA17Q15506 151 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 BMP2KLQ5H9B9 411 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 TAX1BP1Q86VP1 789 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 USP17L8P0C7I0 530 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 DTHD1Q6ZMT9 781 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 TAF4BQ92750 862 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 SLC16A2P36021 539 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 IFRD2Q12894 506 aaPredicted RBP10.23□□□□□ -0.77
CTC1-201ENST00000315684 GRAPQ13588 217 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 CEP135Q66GS9 1140 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 PI16Q6UXB8 463 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 GRAPLQ8TC17 118 aaPredicted RBP10.23□□□□□ -0.77
CTC1-201ENST00000315684 IMPG2Q9BZV3 1241 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 SUGCTQ9HAC7 445 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 HEG1Q9ULI3 1381 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 SYKP43405 635 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 DCAF17Q5H9S7 520 aaPredicted RBP10.23□□□□□ -0.77
CTC1-201ENST00000315684 TMX3Q96JJ7 454 aa10.23□□□□□ -0.77
CTC1-201ENST00000315684 RBM28Q9NW13 759 aaKnown RBP10.23□□□□□ -0.77
CTC1-201ENST00000315684 HOXB7P09629 217 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 AK2P54819 239 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 GPS2Q13227 327 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 BIRC3Q13489 604 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 SKIV2LQ15477 1246 aaKnown RBP10.22□□□□□ -0.77
CTC1-201ENST00000315684 SLC27A3Q5K4L6 730 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 NACA2Q9H009 215 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 KDRP35968 1356 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 KRT19P08727 400 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 KCTD2Q14681 263 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 GPIHBP1Q8IV16 184 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 LEMD3Q9Y2U8 911 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 COL15A1P39059 1388 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 PLEKHM2Q8IWE5 1019 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 OTUD5Q96G74 571 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 DCTPP1Q9H773 170 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 BLMP54132 1417 aaPredicted RBP10.22□□□□□ -0.77
CTC1-201ENST00000315684 ATP7BP35670 1465 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 TMCO5BA8MYB1 307 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 POLA2Q14181 598 aa10.22□□□□□ -0.77
CTC1-201ENST00000315684 DHX32Q7L7V1 743 aaKnown RBP10.22□□□□□ -0.77
CTC1-201ENST00000315684 LMAN1P49257 510 aa10.21□□□□□ -0.77
CTC1-201ENST00000315684 TPH2Q8IWU9 490 aa10.21□□□□□ -0.77
CTC1-201ENST00000315684 SCAND2PQ9GZW5 306 aaPredicted RBP10.21□□□□□ -0.77
CTC1-201ENST00000315684 STX17P56962 302 aa10.21□□□□□ -0.77
CTC1-201ENST00000315684 CHURC1Q8WUH1 139 aa10.21□□□□□ -0.77
CTC1-201ENST00000315684 RBM27Q9P2N5 1060 aaKnown RBP10.21□□□□□ -0.77
CTC1-201ENST00000315684 KCNJ14Q9UNX9 436 aa10.21□□□□□ -0.77
CTC1-201ENST00000315684 HDAC1Q13547 482 aaPredicted RBP10.21□□□□□ -0.77
CTC1-201ENST00000315684 NLRX1Q86UT6 975 aa10.21□□□□□ -0.77
CTC1-201ENST00000315684 ZBTB40Q9NUA8 1239 aa10.21□□□□□ -0.77
CTC1-201ENST00000315684 BABAM1Q9NWV8 329 aa10.21□□□□□ -0.77
CTC1-201ENST00000315684 CNPY2Q9Y2B0 182 aa10.21□□□□□ -0.77
CTC1-201ENST00000315684 STK25O00506 426 aa10.21□□□□□ -0.78
CTC1-201ENST00000315684 CHMLP26374 656 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms