RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SLC9C1Q4G0N8 1177 aa14.74□□□□□ -0.05
SNED1-201ENST00000310397 APPBP2Q92624 585 aa14.74□□□□□ -0.05
SNED1-201ENST00000310397 NUCKS1Q9H1E3 243 aaKnown RBP14.74□□□□□ -0.05
SNED1-201ENST00000310397 MED4Q9NPJ6 270 aa14.74□□□□□ -0.05
SNED1-201ENST00000310397 PPFIBP2Q8ND30 876 aa14.74□□□□□ -0.05
SNED1-201ENST00000310397 VIMP08670 466 aaKnown RBP14.74□□□□□ -0.05
SNED1-201ENST00000310397 KBTBD3Q8NAB2 608 aa14.74□□□□□ -0.05
SNED1-201ENST00000310397 STMN2Q93045 179 aa14.74□□□□□ -0.05
SNED1-201ENST00000310397 NAP1L4Q99733 375 aaKnown RBP14.74□□□□□ -0.05
SNED1-201ENST00000310397 KCNK9Q9NPC2 374 aa14.74□□□□□ -0.05
SNED1-201ENST00000310397 CCDC25Q86WR0 208 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 SECISBP2LQ93073 1101 aaKnown RBP14.73□□□□□ -0.05
SNED1-201ENST00000310397 C6orf229H3BNL8 230 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.73□□□□□ -0.05
SNED1-201ENST00000310397 WWC3Q9ULE0 1092 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 FRMD4BQ9Y2L6 1034 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 MRVI1Q9Y6F6 885 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 FAM13AO94988 1023 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 CCDC110Q8TBZ0 833 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 PLCB1Q9NQ66 1216 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 TNNI3KQ59H18 835 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 FCHSD1Q86WN1 690 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 ZCRB1Q8TBF4 217 aaKnown RBP14.73□□□□□ -0.05
SNED1-201ENST00000310397 FPGT-TNNI3KV9GXZ4 949 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 XPO4Q9C0E2 1151 aaKnown RBP14.73□□□□□ -0.05
SNED1-201ENST00000310397 PTPRTO14522 1441 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 NR1I2O75469 434 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 CSGALNACT2Q8N6G5 542 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 GPT2Q8TD30 523 aa14.73□□□□□ -0.05
SNED1-201ENST00000310397 GBP1P32455 592 aa14.72□□□□□ -0.05
SNED1-201ENST00000310397 CCDC160A6NGH7 325 aa14.72□□□□□ -0.05
SNED1-201ENST00000310397 MTMR3Q13615 1198 aa14.72□□□□□ -0.05
SNED1-201ENST00000310397 EPB41P11171 864 aaKnown RBP14.72□□□□□ -0.05
SNED1-201ENST00000310397 CDC25BP30305 580 aa14.72□□□□□ -0.05
SNED1-201ENST00000310397 LMNTD2Q8IXW0 634 aa14.72□□□□□ -0.05
SNED1-201ENST00000310397 CACNA2D3Q8IZS8 1091 aa14.72□□□□□ -0.05
SNED1-201ENST00000310397 UBL4BQ8N7F7 174 aa14.72□□□□□ -0.05
SNED1-201ENST00000310397 CFAP57Q96MR6 1250 aa14.72□□□□□ -0.05
SNED1-201ENST00000310397 SAR1BQ9Y6B6 198 aa14.72□□□□□ -0.05
SNED1-201ENST00000310397 TRAF5O00463 557 aa14.72□□□□□ -0.05
SNED1-201ENST00000310397 FAM227BQ96M60 508 aa14.72□□□□□ -0.05
SNED1-201ENST00000310397 ETF1P62495 437 aaKnown RBP14.72□□□□□ -0.05
SNED1-201ENST00000310397 WHAMMP3Q1A5X7 153 aa14.72□□□□□ -0.05
SNED1-201ENST00000310397 MTX1Q13505 466 aa14.71□□□□□ -0.05
SNED1-201ENST00000310397 NFATC2IPQ8NCF5 419 aa14.71□□□□□ -0.05
SNED1-201ENST00000310397 SEC62Q99442 399 aaKnown RBP14.71□□□□□ -0.05
SNED1-201ENST00000310397 NUTM2BA6NNL0 878 aaPredicted RBP14.71□□□□□ -0.05
SNED1-201ENST00000310397 NUTM2EB1AL46 878 aaPredicted RBP14.71□□□□□ -0.05
SNED1-201ENST00000310397 IL13P35225 146 aa14.71□□□□□ -0.05
SNED1-201ENST00000310397 SLC39A6Q13433 755 aa14.71□□□□□ -0.05
SNED1-201ENST00000310397 SF3B2Q13435 895 aaKnown RBP14.71□□□□□ -0.05
SNED1-201ENST00000310397 UTP14CQ5TAP6 766 aaKnown RBP14.71□□□□□ -0.05
SNED1-201ENST00000310397 CADPS2Q86UW7 1296 aa14.71□□□□□ -0.05
SNED1-201ENST00000310397 MSANTD4Q8NCY6 345 aa14.71□□□□□ -0.05
SNED1-201ENST00000310397 EYA1Q99502 592 aa14.71□□□□□ -0.05
SNED1-201ENST00000310397 SMIM23A6NLE4 172 aa14.71□□□□□ -0.06
SNED1-201ENST00000310397 RXRAP19793 462 aa14.71□□□□□ -0.06
SNED1-201ENST00000310397 CABS1Q96KC9 395 aa14.71□□□□□ -0.06
SNED1-201ENST00000310397 WDR7Q9Y4E6 1490 aa14.71□□□□□ -0.06
SNED1-201ENST00000310397 SBNO1A3KN83 1393 aa14.71□□□□□ -0.06
SNED1-201ENST00000310397 DMTNQ08495 405 aa14.71□□□□□ -0.06
SNED1-201ENST00000310397 BUB1BO60566 1050 aaPredicted RBP14.7□□□□□ -0.06
SNED1-201ENST00000310397 EEF2P13639 858 aaKnown RBP14.7□□□□□ -0.06
SNED1-201ENST00000310397 PLCB3Q01970 1234 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 ME3Q16798 604 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 FAM173BQ6P4H8 233 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 SYCE1Q8N0S2 351 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 METTL22Q9BUU2 404 aaPredicted RBP14.7□□□□□ -0.06
SNED1-201ENST00000310397 SBNO2Q9Y2G9 1366 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 ARHGEF5Q12774 1597 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 PNMA6EA0A0J9YXQ4 647 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 PSDA5PKW4 1024 aaPredicted RBP14.7□□□□□ -0.06
SNED1-201ENST00000310397 G2E3Q7L622 706 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 DSCC1Q9BVC3 393 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 CLASP1Q7Z460 1538 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 ATP8B1O43520 1251 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 PPP2R5EQ16537 467 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 KIFAP3Q92845 792 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 ZNF274Q96GC6 653 aaPredicted RBP14.7□□□□□ -0.06
SNED1-201ENST00000310397 MPHOSPH6Q99547 160 aaKnown RBP14.7□□□□□ -0.06
SNED1-201ENST00000310397 TXNDC16Q9P2K2 825 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 TMEM110-MUSTN1A8MSY1 372 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 PDE4DQ08499 809 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 RAPGEF1Q13905 1077 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 TRIM58Q8NG06 486 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 DCAF5Q96JK2 942 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 NCOA5Q9HCD5 579 aaKnown RBP14.7□□□□□ -0.06
SNED1-201ENST00000310397 MCM9Q9NXL9 1143 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 GOLGA5Q8TBA6 731 aa14.7□□□□□ -0.06
SNED1-201ENST00000310397 ZNF174Q15697 407 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 GLT8D2Q9H1C3 349 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 STK24Q9Y6E0 443 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 ERCC6LQ2NKX8 1250 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 CCDC14Q49A88 953 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 NBPF6Q5VWK0 638 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 FYB2Q5VWT5 728 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 NBPF5PQ86XG9 351 aaPredicted RBP14.69□□□□□ -0.06
SNED1-201ENST00000310397 TRIML1Q8N9V2 468 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 NBPF4Q96M43 638 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms