RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 RRP12Q5JTH9 1297 aaKnown RBP13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 STRIP1Q5VSL9 837 aa13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 NFXL1Q6ZNB6 911 aa13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 MB21D2Q8IYB1 491 aaPredicted RBP13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 TMTC2Q8N394 836 aa13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 MTA3Q9BTC8 594 aa13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 AGXT2Q9BYV1 514 aa13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 DBNDD1Q9H9R9 158 aa13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 ZNF277Q9NRM2 450 aaPredicted RBP13.4□□□□□ -0.26
CTDSPL-202ENST00000310189 USP17L3A6NCW0 530 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 USP17L4A6NCW7 530 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 B4E1Z4 1266 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 APOBRQ0VD83 1088 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 SBK1Q52WX2 424 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 CPLX2Q6PUV4 134 aaKnown RBP13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 ARHGAP27Q6ZUM4 889 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 USP17L1Q7RTZ2 530 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 TBC1D10CQ8IV04 446 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 TEX11Q8IYF3 940 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 ZNF384Q8TF68 577 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 TEKT1Q969V4 418 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 LLPHQ9BRT6 129 aaKnown RBP13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 UBAC1Q9BSL1 405 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 LRRC2Q9BYS8 371 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 DCP1AQ9NPI6 582 aaPredicted RBP13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 MCM9Q9NXL9 1143 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 ANGEL1Q9UNK9 670 aaKnown RBP13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 TTF2Q9UNY4 1162 aaKnown RBP13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 CHD4Q14839 1912 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 MYH2Q9UKX2 1941 aa13.39□□□□□ -0.27
CTDSPL-202ENST00000310189 GPR75-ASB3A0A0A6YYF3 556 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 DDX11L8A8MPP1 907 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 USP17L12C9JPN9 530 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 USP17L21D6R901 530 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 NFKBIEO00221 500 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 IFIT3O14879 490 aaKnown RBP13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 PFKFB2O60825 505 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 POLR3DP05423 398 aaPredicted RBP13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 GJB2P29033 226 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 HMGN5P82970 282 aaKnown RBP13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 TMEM67Q5HYA8 995 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 CHST3Q7LGC8 479 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 LARGE2Q8N3Y3 721 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 NECAB1Q8N987 351 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 FAM184AQ8NB25 1140 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 GTF3C6Q969F1 213 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 ATP6V1DQ9Y5K8 247 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 LTBP3Q9NS15 1303 aa13.38□□□□□ -0.27
CTDSPL-202ENST00000310189 CPLX1O14810 134 aa13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 KDM4AO75164 1064 aa13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 YBX3P16989 372 aaKnown RBP eCLIP13.37□□□□□ -0.278e-7■□□□□ 8.9
CTDSPL-202ENST00000310189 IARSP41252 1262 aaKnown RBP13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 RASSF7Q02833 373 aa13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 GPR162Q16538 588 aa13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 CCDC178Q5BJE1 867 aa13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 CTR9Q6PD62 1173 aa13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 IQCA1Q86XH1 822 aa13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 SH3RF3Q8TEJ3 882 aaPredicted RBP13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 TNPO1Q92973 898 aaKnown RBP13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 ARFGEF1Q9Y6D6 1849 aa13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 GAKO14976 1311 aa13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 MYO3BQ8WXR4 1341 aa13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 TIAM2Q8IVF5 1701 aa13.37□□□□□ -0.27
CTDSPL-202ENST00000310189 KLF18A0A0U1RQI7 1052 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 F8W031 263 aaPredicted RBP13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 RANBP6O60518 1105 aaKnown RBP13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 LARGE1O95461 756 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 HDLBPQ00341 1268 aaKnown RBP13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 HHIPL2Q6UWX4 724 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 NIM1KQ8IY84 436 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 TGFBRAP1Q8WUH2 860 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 MRIQ9BWK5 157 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 NEDD4P46934 1319 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 GOLGA8BA8MQT2 603 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 CDKL5O76039 1030 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 PDIA3P30101 505 aaKnown RBP13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 LIFRP42702 1097 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 RBM5P52756 815 aaKnown RBP eCLIP13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 EVCP57679 992 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 WTAPQ15007 396 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 LARP1BQ659C4 914 aaKnown RBP13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 STK11IPQ8N1F8 1099 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 NBPF3Q9H094 633 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 MKNK2Q9HBH9 465 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 ZSWIM5Q9P217 1185 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 HDAC9Q9UKV0 1011 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 SLC12A7Q9Y666 1083 aa13.36□□□□□ -0.27
CTDSPL-202ENST00000310189 SH2B2O14492 632 aaPredicted RBP13.35□□□□□ -0.27
CTDSPL-202ENST00000310189 STX6O43752 255 aa13.35□□□□□ -0.27
CTDSPL-202ENST00000310189 MCM4P33991 863 aa13.35□□□□□ -0.27
CTDSPL-202ENST00000310189 GRIK5Q16478 980 aa13.35□□□□□ -0.27
CTDSPL-202ENST00000310189 CYB5R4Q7L1T6 521 aa13.35□□□□□ -0.27
CTDSPL-202ENST00000310189 MAPKAPK5Q8IW41 473 aa13.35□□□□□ -0.27
CTDSPL-202ENST00000310189 ZNF444Q8N0Y2 327 aaPredicted RBP13.35□□□□□ -0.27
CTDSPL-202ENST00000310189 JDP2Q8WYK2 163 aa13.35□□□□□ -0.27
CTDSPL-202ENST00000310189 DAGLAQ9Y4D2 1042 aa13.35□□□□□ -0.27
CTDSPL-202ENST00000310189 FER1L6Q2WGJ9 1857 aa13.34□□□□□ -0.27
CTDSPL-202ENST00000310189 CCDC196A0A1B0GTZ2 297 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms