RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 NEDD4P46934 1319 aa16.64■□□□□ 0.25
EIF3F-201ENST00000309828 PSME4Q14997 1843 aa16.63■□□□□ 0.25
EIF3F-201ENST00000309828 B4E1Z4 1266 aa16.63■□□□□ 0.25
EIF3F-201ENST00000309828 PFKFB2O60825 505 aa16.63■□□□□ 0.25
EIF3F-201ENST00000309828 PDIA4P13667 645 aaKnown RBP16.63■□□□□ 0.25
EIF3F-201ENST00000309828 IARSP41252 1262 aaKnown RBP16.63■□□□□ 0.25
EIF3F-201ENST00000309828 RHBDL3P58872 404 aa16.63■□□□□ 0.25
EIF3F-201ENST00000309828 RAB3GAP1Q15042 981 aa16.63■□□□□ 0.25
EIF3F-201ENST00000309828 TEX11Q8IYF3 940 aa16.63■□□□□ 0.25
EIF3F-201ENST00000309828 ESR2Q92731 530 aa16.63■□□□□ 0.25
EIF3F-201ENST00000309828 GTF3C6Q969F1 213 aa16.63■□□□□ 0.25
EIF3F-201ENST00000309828 LARP6Q9BRS8 491 aaKnown RBP16.63■□□□□ 0.25
EIF3F-201ENST00000309828 PPP1R1BQ9UD71 204 aaPredicted RBP16.63■□□□□ 0.25
EIF3F-201ENST00000309828 SMC3Q9UQE7 1217 aa16.63■□□□□ 0.25
EIF3F-201ENST00000309828 LTBP3Q9NS15 1303 aa16.63■□□□□ 0.25
EIF3F-201ENST00000309828 ROBO3Q96MS0 1386 aa16.63■□□□□ 0.25
EIF3F-201ENST00000309828 ORC4O43929 436 aa16.62■□□□□ 0.25
EIF3F-201ENST00000309828 SART3Q15020 963 aaKnown RBP16.62■□□□□ 0.25
EIF3F-201ENST00000309828 C12orf60Q5U649 245 aa16.62■□□□□ 0.25
EIF3F-201ENST00000309828 CYB5R4Q7L1T6 521 aa16.62■□□□□ 0.25
EIF3F-201ENST00000309828 CCDC83Q8IWF9 413 aa16.62■□□□□ 0.25
EIF3F-201ENST00000309828 NIM1KQ8IY84 436 aa16.62■□□□□ 0.25
EIF3F-201ENST00000309828 ZDHHC15Q96MV8 337 aa16.62■□□□□ 0.25
EIF3F-201ENST00000309828 LRRC2Q9BYS8 371 aa16.62■□□□□ 0.25
EIF3F-201ENST00000309828 TAOK3Q9H2K8 898 aa16.62■□□□□ 0.25
EIF3F-201ENST00000309828 MCM9Q9NXL9 1143 aa16.62■□□□□ 0.25
EIF3F-201ENST00000309828 ANGEL1Q9UNK9 670 aaKnown RBP16.62■□□□□ 0.25
EIF3F-201ENST00000309828 NAV1Q8NEY1 1877 aa16.62■□□□□ 0.25
EIF3F-201ENST00000309828 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 SCN9AQ15858 1988 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 YDJCA8MPS7 323 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 F8W031 263 aaPredicted RBP16.61■□□□□ 0.25
EIF3F-201ENST00000309828 SH2B2O14492 632 aaPredicted RBP16.61■□□□□ 0.25
EIF3F-201ENST00000309828 KDM4AO75164 1064 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 LIFRP42702 1097 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 CRKP46108 304 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 PDE4BQ07343 736 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 APOBRQ0VD83 1088 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 CHST3Q7LGC8 479 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 KLHL34Q8N239 644 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 TGFBRAP1Q8WUH2 860 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 LLPHQ9BRT6 129 aaKnown RBP16.61■□□□□ 0.25
EIF3F-201ENST00000309828 MXD3Q9BW11 206 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 KCNQ5Q9NR82 932 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 ZNF277Q9NRM2 450 aaPredicted RBP16.61■□□□□ 0.25
EIF3F-201ENST00000309828 SERPINA10Q9UK55 444 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 ZNRF3Q9ULT6 936 aa16.61■□□□□ 0.25
EIF3F-201ENST00000309828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.61■□□□□ 0.25
EIF3F-201ENST00000309828 DDX60LQ5H9U9 1706 aaKnown RBP16.6■□□□□ 0.25
EIF3F-201ENST00000309828 ST3GAL1Q11201 340 aa16.6■□□□□ 0.25
EIF3F-201ENST00000309828 SGMS1Q86VZ5 419 aa16.6■□□□□ 0.25
EIF3F-201ENST00000309828 TMTC2Q8N394 836 aa16.6■□□□□ 0.25
EIF3F-201ENST00000309828 NECAB1Q8N987 351 aa16.6■□□□□ 0.25
EIF3F-201ENST00000309828 ZNF287Q9HBT7 754 aa16.6■□□□□ 0.25
EIF3F-201ENST00000309828 TOMM22Q9NS69 142 aa16.6■□□□□ 0.25
EIF3F-201ENST00000309828 ZSWIM5Q9P217 1185 aa16.6■□□□□ 0.25
EIF3F-201ENST00000309828 TACC3Q9Y6A5 838 aa16.6■□□□□ 0.25
EIF3F-201ENST00000309828 FLT1P17948 1338 aa16.6■□□□□ 0.25
EIF3F-201ENST00000309828 BAZ2AQ9UIF9 1905 aaKnown RBP16.6■□□□□ 0.25
EIF3F-201ENST00000309828 FOCADQ5VW36 1801 aa16.59■□□□□ 0.25
EIF3F-201ENST00000309828 ERICH2A1L162 156 aa16.59■□□□□ 0.25
EIF3F-201ENST00000309828 VIL1P09327 827 aaKnown RBP16.59■□□□□ 0.25
EIF3F-201ENST00000309828 USP17L8P0C7I0 530 aa16.59■□□□□ 0.25
EIF3F-201ENST00000309828 PDIA3P30101 505 aaKnown RBP16.59■□□□□ 0.25
EIF3F-201ENST00000309828 MMP14P50281 582 aa16.59■□□□□ 0.25
EIF3F-201ENST00000309828 TMEM67Q5HYA8 995 aa16.59■□□□□ 0.25
EIF3F-201ENST00000309828 RRP12Q5JTH9 1297 aaKnown RBP16.59■□□□□ 0.25
EIF3F-201ENST00000309828 RSBN1LQ6PCB5 846 aaPredicted RBP16.59■□□□□ 0.25
EIF3F-201ENST00000309828 KIAA0825Q8IV33 1275 aa16.59■□□□□ 0.25
EIF3F-201ENST00000309828 IGDCC4Q8TDY8 1250 aa16.59■□□□□ 0.25
EIF3F-201ENST00000309828 USP40Q9NVE5 1235 aa16.59■□□□□ 0.25
EIF3F-201ENST00000309828 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
EIF3F-201ENST00000309828 ARFGEF1Q9Y6D6 1849 aa16.59■□□□□ 0.25
EIF3F-201ENST00000309828 CDK5RAP2Q96SN8 1893 aa16.59■□□□□ 0.25
EIF3F-201ENST00000309828 CYP2D7A0A087X1C5 515 aa16.58■□□□□ 0.24
EIF3F-201ENST00000309828 KLF18A0A0U1RQI7 1052 aa16.58■□□□□ 0.24
EIF3F-201ENST00000309828 IFIT3O14879 490 aaKnown RBP16.58■□□□□ 0.24
EIF3F-201ENST00000309828 DHX16O60231 1041 aaKnown RBP16.58■□□□□ 0.24
EIF3F-201ENST00000309828 NPM3O75607 178 aaKnown RBP16.58■□□□□ 0.24
EIF3F-201ENST00000309828 POLR3DP05423 398 aaPredicted RBP16.58■□□□□ 0.24
EIF3F-201ENST00000309828 SCNN1DP51172 638 aa16.58■□□□□ 0.24
EIF3F-201ENST00000309828 RCAN1P53805 252 aa16.58■□□□□ 0.24
EIF3F-201ENST00000309828 APOBEC3HQ6NTF7 200 aaKnown RBP16.58■□□□□ 0.24
EIF3F-201ENST00000309828 MAPKAPK5Q8IW41 473 aa16.58■□□□□ 0.24
EIF3F-201ENST00000309828 JDP2Q8WYK2 163 aa16.58■□□□□ 0.24
EIF3F-201ENST00000309828 UBAC1Q9BSL1 405 aa16.58■□□□□ 0.24
EIF3F-201ENST00000309828 INCENPQ9NQS7 918 aa16.58■□□□□ 0.24
EIF3F-201ENST00000309828 TAOK2Q9UL54 1235 aa16.58■□□□□ 0.24
EIF3F-201ENST00000309828 COL4A5P29400 1685 aa16.57■□□□□ 0.24
EIF3F-201ENST00000309828 NFKBIEO00221 500 aa16.57■□□□□ 0.24
EIF3F-201ENST00000309828 CYP2D6P10635 497 aa16.57■□□□□ 0.24
EIF3F-201ENST00000309828 PDCP20941 246 aa16.57■□□□□ 0.24
EIF3F-201ENST00000309828 GJB2P29033 226 aa16.57■□□□□ 0.24
EIF3F-201ENST00000309828 HMGN5P82970 282 aaKnown RBP16.57■□□□□ 0.24
EIF3F-201ENST00000309828 SCRN1Q12765 414 aa16.57■□□□□ 0.24
EIF3F-201ENST00000309828 STK3Q13188 491 aa16.57■□□□□ 0.24
EIF3F-201ENST00000309828 CDC42EP5Q6NZY7 148 aa16.57■□□□□ 0.24
EIF3F-201ENST00000309828 CLEC17AQ6ZS10 378 aa16.57■□□□□ 0.24
EIF3F-201ENST00000309828 IQCA1Q86XH1 822 aa16.57■□□□□ 0.24
EIF3F-201ENST00000309828 AGBL3Q8NEM8 1001 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms