RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 CDKL5O76039 1030 aa28.09■■■□□ 2.09
RFWD2-201ENST00000308769 NTRK3Q16288 839 aa28.09■■■□□ 2.09
RFWD2-201ENST00000308769 PDLIM2Q96JY6 352 aa28.09■■■□□ 2.09
RFWD2-201ENST00000308769 AATFQ9NY61 560 aaKnown RBP eCLIP28.09■■■□□ 2.09
RFWD2-201ENST00000308769 LAMB1P07942 1786 aa28.09■■■□□ 2.09
RFWD2-201ENST00000308769 ATL3Q6DD88 541 aa28.09■■■□□ 2.09
RFWD2-201ENST00000308769 BRIP1Q9BX63 1249 aa28.09■■■□□ 2.09
RFWD2-201ENST00000308769 KIAA1551Q9HCM1 1747 aa28.08■■■□□ 2.09
RFWD2-201ENST00000308769 RANBP6O60518 1105 aaKnown RBP28.08■■■□□ 2.09
RFWD2-201ENST00000308769 WTAPQ15007 396 aa28.08■■■□□ 2.09
RFWD2-201ENST00000308769 SART3Q15020 963 aaKnown RBP28.08■■■□□ 2.09
RFWD2-201ENST00000308769 AEBP2Q6ZN18 517 aaPredicted RBP28.08■■■□□ 2.09
RFWD2-201ENST00000308769 XDHP47989 1333 aa28.08■■■□□ 2.09
RFWD2-201ENST00000308769 POLR3DP05423 398 aaPredicted RBP28.07■■■□□ 2.08
RFWD2-201ENST00000308769 ST5P78524 1137 aa28.07■■■□□ 2.08
RFWD2-201ENST00000308769 CRY2Q49AN0 593 aa28.07■■■□□ 2.08
RFWD2-201ENST00000308769 CPLX2Q6PUV4 134 aaKnown RBP28.07■■■□□ 2.08
RFWD2-201ENST00000308769 GPR101Q96P66 508 aaPredicted RBP28.07■■■□□ 2.08
RFWD2-201ENST00000308769 ALG1Q9BT22 464 aa28.07■■■□□ 2.08
RFWD2-201ENST00000308769 LEMD3Q9Y2U8 911 aa28.07■■■□□ 2.08
RFWD2-201ENST00000308769 KIF28PB7ZC32 967 aa28.07■■■□□ 2.08
RFWD2-201ENST00000308769 PROM2Q8N271 834 aa28.07■■■□□ 2.08
RFWD2-201ENST00000308769 TAOK2Q9UL54 1235 aa28.07■■■□□ 2.08
RFWD2-201ENST00000308769 DDX19AQ9NUU7 478 aaKnown RBP28.06■■■□□ 2.08
RFWD2-201ENST00000308769 ERICH2A1L162 156 aa28.06■■■□□ 2.08
RFWD2-201ENST00000308769 DDR1Q08345 913 aa28.06■■■□□ 2.08
RFWD2-201ENST00000308769 MAP3K11Q16584 847 aa28.06■■■□□ 2.08
RFWD2-201ENST00000308769 NID2Q14112 1375 aa28.05■■■□□ 2.08
RFWD2-201ENST00000308769 UBE2Q2LH0YL09 131 aa28.05■■■□□ 2.08
RFWD2-201ENST00000308769 IARSP41252 1262 aaKnown RBP28.05■■■□□ 2.08
RFWD2-201ENST00000308769 KIF23Q02241 960 aaPredicted RBP28.05■■■□□ 2.08
RFWD2-201ENST00000308769 TXNRD1Q16881 649 aa28.05■■■□□ 2.08
RFWD2-201ENST00000308769 CTR9Q6PD62 1173 aa28.05■■■□□ 2.08
RFWD2-201ENST00000308769 SYNE3Q6ZMZ3 975 aa28.05■■■□□ 2.08
RFWD2-201ENST00000308769 TNMDQ9H2S6 317 aa28.05■■■□□ 2.08
RFWD2-201ENST00000308769 KLHL34Q8N239 644 aa28.04■■■□□ 2.08
RFWD2-201ENST00000308769 ESR2Q92731 530 aa28.04■■■□□ 2.08
RFWD2-201ENST00000308769 UBAC1Q9BSL1 405 aa28.04■■■□□ 2.08
RFWD2-201ENST00000308769 GPSM2P81274 684 aa28.04■■■□□ 2.08
RFWD2-201ENST00000308769 EVX2Q03828 476 aa28.04■■■□□ 2.08
RFWD2-201ENST00000308769 CKAP2LQ8IYA6 745 aa28.04■■■□□ 2.08
RFWD2-201ENST00000308769 MTA3Q9BTC8 594 aa28.04■■■□□ 2.08
RFWD2-201ENST00000308769 CLSTN2Q9H4D0 955 aa28.04■■■□□ 2.08
RFWD2-201ENST00000308769 DZIP1Q86YF9 867 aaKnown RBP28.03■■■□□ 2.08
RFWD2-201ENST00000308769 TNKSO95271 1327 aa28.03■■■□□ 2.08
RFWD2-201ENST00000308769 USP17L12C9JPN9 530 aa28.03■■■□□ 2.08
RFWD2-201ENST00000308769 USP17L21D6R901 530 aa28.03■■■□□ 2.08
RFWD2-201ENST00000308769 PRDM1O75626 825 aa28.03■■■□□ 2.08
RFWD2-201ENST00000308769 MYSM1Q5VVJ2 828 aa28.03■■■□□ 2.08
RFWD2-201ENST00000308769 BRAPQ7Z569 592 aa28.03■■■□□ 2.08
RFWD2-201ENST00000308769 SLC26A6Q9BXS9 759 aa28.03■■■□□ 2.08
RFWD2-201ENST00000308769 RTEL1Q9NZ71 1219 aa28.03■■■□□ 2.08
RFWD2-201ENST00000308769 CLIC4Q9Y696 253 aa28.03■■■□□ 2.08
RFWD2-201ENST00000308769 MYH6P13533 1939 aa28.02■■■□□ 2.08
RFWD2-201ENST00000308769 CCDC192P0DO97 292 aa28.02■■■□□ 2.08
RFWD2-201ENST00000308769 KRT40Q6A162 431 aa28.02■■■□□ 2.08
RFWD2-201ENST00000308769 TDRD7Q8NHU6 1098 aaKnown RBP28.02■■■□□ 2.08
RFWD2-201ENST00000308769 CRNKL1Q9BZJ0 848 aaKnown RBP28.02■■■□□ 2.08
RFWD2-201ENST00000308769 GOLPH3LQ9H4A5 285 aa28.02■■■□□ 2.08
RFWD2-201ENST00000308769 DCP1AQ9NPI6 582 aaPredicted RBP28.02■■■□□ 2.08
RFWD2-201ENST00000308769 DLEC1Q9Y238 1755 aa28.01■■■□□ 2.08
RFWD2-201ENST00000308769 ESPNB1AK53 854 aa28.01■■■□□ 2.08
RFWD2-201ENST00000308769 POLRMTO00411 1230 aaKnown RBP28.01■■■□□ 2.08
RFWD2-201ENST00000308769 ZBTB22O15209 634 aa28.01■■■□□ 2.08
RFWD2-201ENST00000308769 ME1P48163 572 aa28.01■■■□□ 2.08
RFWD2-201ENST00000308769 SEC23AQ15436 765 aa28.01■■■□□ 2.08
RFWD2-201ENST00000308769 CCAR1Q8IX12 1150 aaKnown RBP28.01■■■□□ 2.08
RFWD2-201ENST00000308769 RTN1Q16799 776 aa28.01■■■□□ 2.07
RFWD2-201ENST00000308769 ZNF654Q8IZM8 581 aa28.01■■■□□ 2.07
RFWD2-201ENST00000308769 UVSSAQ2YD98 709 aa28■■■□□ 2.07
RFWD2-201ENST00000308769 SPTY2D1Q68D10 685 aaPredicted RBP28■■■□□ 2.07
RFWD2-201ENST00000308769 ZNF804AQ7Z570 1209 aa28■■■□□ 2.07
RFWD2-201ENST00000308769 TMTC2Q8N394 836 aa28■■■□□ 2.07
RFWD2-201ENST00000308769 RBM17Q96I25 401 aaKnown RBP28■■■□□ 2.07
RFWD2-201ENST00000308769 STK36Q9NRP7 1315 aa28■■■□□ 2.07
RFWD2-201ENST00000308769 UFL1O94874 794 aa28■■■□□ 2.07
RFWD2-201ENST00000308769 IFNAR1P17181 557 aa28■■■□□ 2.07
RFWD2-201ENST00000308769 SSRP1Q08945 709 aaKnown RBP28■■■□□ 2.07
RFWD2-201ENST00000308769 RBM43Q6ZSC3 357 aaKnown RBP28■■■□□ 2.07
RFWD2-201ENST00000308769 LINC00301Q8NCQ3 95 aa28■■■□□ 2.07
RFWD2-201ENST00000308769 RGS22Q8NE09 1264 aa28■■■□□ 2.07
RFWD2-201ENST00000308769 FMNL1O95466 1100 aaPredicted RBP27.99■■■□□ 2.07
RFWD2-201ENST00000308769 WDR66Q8TBY9 1149 aa27.99■■■□□ 2.07
RFWD2-201ENST00000308769 NUP133Q8WUM0 1156 aa27.99■■■□□ 2.07
RFWD2-201ENST00000308769 PCDHA7Q9UN72 937 aa27.99■■■□□ 2.07
RFWD2-201ENST00000308769 ANKRD31Q8N7Z5 1873 aa27.99■■■□□ 2.07
RFWD2-201ENST00000308769 LDHBP07195 334 aaKnown RBP27.98■■■□□ 2.07
RFWD2-201ENST00000308769 GRIK5Q16478 980 aa27.98■■■□□ 2.07
RFWD2-201ENST00000308769 CMTR1Q8N1G2 835 aaKnown RBP27.98■■■□□ 2.07
RFWD2-201ENST00000308769 ENAHQ8N8S7 591 aaPredicted RBP27.98■■■□□ 2.07
RFWD2-201ENST00000308769 ATP8A2Q9NTI2 1148 aa27.98■■■□□ 2.07
RFWD2-201ENST00000308769 POLR3EQ9NVU0 708 aa27.98■■■□□ 2.07
RFWD2-201ENST00000308769 FGRP09769 529 aa27.98■■■□□ 2.07
RFWD2-201ENST00000308769 GUCY1A2P33402 732 aa27.98■■■□□ 2.07
RFWD2-201ENST00000308769 TYRO3Q06418 890 aa27.98■■■□□ 2.07
RFWD2-201ENST00000308769 ZSCAN10Q96SZ4 725 aaPredicted RBP27.98■■■□□ 2.07
RFWD2-201ENST00000308769 USP25Q9UHP3 1055 aa27.98■■■□□ 2.07
RFWD2-201ENST00000308769 C15orf52Q6ZUT6 534 aaKnown RBP27.97■■■□□ 2.07
RFWD2-201ENST00000308769 CCDC82Q8N4S0 544 aa27.97■■■□□ 2.07
RFWD2-201ENST00000308769 MRVI1Q9Y6F6 885 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms