RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 IARSP41252 1262 aaKnown RBP20.68■□□□□ 0.9
KRT28-201ENST00000306658 HDLBPQ00341 1268 aaKnown RBP20.68■□□□□ 0.9
KRT28-201ENST00000306658 TGFBRAP1Q8WUH2 860 aa20.68■□□□□ 0.9
KRT28-201ENST00000306658 TOMM22Q9NS69 142 aa20.68■□□□□ 0.9
KRT28-201ENST00000306658 MKRN1Q9UHC7 482 aaKnown RBP20.68■□□□□ 0.9
KRT28-201ENST00000306658 LARGE1O95461 756 aa20.67■□□□□ 0.9
KRT28-201ENST00000306658 SCNN1DP51172 638 aa20.67■□□□□ 0.9
KRT28-201ENST00000306658 KIAA0825Q8IV33 1275 aa20.67■□□□□ 0.9
KRT28-201ENST00000306658 NIM1KQ8IY84 436 aa20.67■□□□□ 0.9
KRT28-201ENST00000306658 MYO3BQ8WXR4 1341 aa20.67■□□□□ 0.9
KRT28-201ENST00000306658 ANTXR2P58335 489 aa20.67■□□□□ 0.9
KRT28-201ENST00000306658 RHBDL3P58872 404 aa20.67■□□□□ 0.9
KRT28-201ENST00000306658 TMEM87BQ96K49 555 aa20.67■□□□□ 0.9
KRT28-201ENST00000306658 ZNRF3Q9ULT6 936 aa20.67■□□□□ 0.9
KRT28-201ENST00000306658 FER1L6Q2WGJ9 1857 aa20.66■□□□□ 0.9
KRT28-201ENST00000306658 CRKP46108 304 aa20.66■□□□□ 0.9
KRT28-201ENST00000306658 CCDC83Q8IWF9 413 aa20.66■□□□□ 0.9
KRT28-201ENST00000306658 INCENPQ9NQS7 918 aa20.66■□□□□ 0.9
KRT28-201ENST00000306658 ZSWIM5Q9P217 1185 aa20.66■□□□□ 0.9
KRT28-201ENST00000306658 CYP2D7A0A087X1C5 515 aa20.65■□□□□ 0.9
KRT28-201ENST00000306658 KDM4AO75164 1064 aa20.65■□□□□ 0.9
KRT28-201ENST00000306658 FGRP09769 529 aa20.65■□□□□ 0.9
KRT28-201ENST00000306658 RRP12Q5JTH9 1297 aaKnown RBP20.65■□□□□ 0.9
KRT28-201ENST00000306658 CYB5R4Q7L1T6 521 aa20.65■□□□□ 0.9
KRT28-201ENST00000306658 JDP2Q8WYK2 163 aa20.65■□□□□ 0.9
KRT28-201ENST00000306658 ESR2Q92731 530 aa20.65■□□□□ 0.9
KRT28-201ENST00000306658 CHMP4CQ96CF2 233 aa20.65■□□□□ 0.9
KRT28-201ENST00000306658 ZNF274Q96GC6 653 aaPredicted RBP20.65■□□□□ 0.9
KRT28-201ENST00000306658 ZDHHC15Q96MV8 337 aa20.65■□□□□ 0.9
KRT28-201ENST00000306658 MTA3Q9BTC8 594 aa20.65■□□□□ 0.9
KRT28-201ENST00000306658 USP17L8P0C7I0 530 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 EVCP57679 992 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 NUCB2P80303 420 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 PDE4BQ07343 736 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 APOBRQ0VD83 1088 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 SART3Q15020 963 aaKnown RBP20.64■□□□□ 0.9
KRT28-201ENST00000306658 C12orf60Q5U649 245 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 ILDR2Q71H61 639 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 MAPKAPK5Q8IW41 473 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 STK11IPQ8N1F8 1099 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 NECAB1Q8N987 351 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 NLGN2Q8NFZ4 835 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 SERPINA10Q9UK55 444 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 ANGEL1Q9UNK9 670 aaKnown RBP20.64■□□□□ 0.9
KRT28-201ENST00000306658 SMC3Q9UQE7 1217 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 TACC3Q9Y6A5 838 aa20.64■□□□□ 0.9
KRT28-201ENST00000306658 PSME4Q14997 1843 aa20.64■□□□□ 0.89
KRT28-201ENST00000306658 VIL1P09327 827 aaKnown RBP20.64■□□□□ 0.89
KRT28-201ENST00000306658 NT5C2P49902 561 aa20.64■□□□□ 0.89
KRT28-201ENST00000306658 RSBN1LQ6PCB5 846 aaPredicted RBP20.64■□□□□ 0.89
KRT28-201ENST00000306658 USP40Q9NVE5 1235 aa20.64■□□□□ 0.89
KRT28-201ENST00000306658 LTBP3Q9NS15 1303 aa20.63■□□□□ 0.89
KRT28-201ENST00000306658 ZNF646O15015 1829 aaPredicted RBP20.63■□□□□ 0.89
KRT28-201ENST00000306658 NFKBIEO00221 500 aa20.63■□□□□ 0.89
KRT28-201ENST00000306658 RAD17O75943 681 aa20.63■□□□□ 0.89
KRT28-201ENST00000306658 POLR3DP05423 398 aaPredicted RBP20.63■□□□□ 0.89
KRT28-201ENST00000306658 STK3Q13188 491 aa20.63■□□□□ 0.89
KRT28-201ENST00000306658 APOBEC3HQ6NTF7 200 aaKnown RBP20.63■□□□□ 0.89
KRT28-201ENST00000306658 LAMB1P07942 1786 aa20.62■□□□□ 0.89
KRT28-201ENST00000306658 CDK5RAP2Q96SN8 1893 aa20.62■□□□□ 0.89
KRT28-201ENST00000306658 ERICH2A1L162 156 aa20.62■□□□□ 0.89
KRT28-201ENST00000306658 ORC4O43929 436 aa20.62■□□□□ 0.89
KRT28-201ENST00000306658 PFKFB2O60825 505 aa20.62■□□□□ 0.89
KRT28-201ENST00000306658 RBM5P52756 815 aaKnown RBP eCLIP20.62■□□□□ 0.89
KRT28-201ENST00000306658 GTF3C6Q969F1 213 aa20.62■□□□□ 0.89
KRT28-201ENST00000306658 NAP1L2Q9ULW6 460 aaPredicted RBP20.62■□□□□ 0.89
KRT28-201ENST00000306658 FLT1P17948 1338 aa20.62■□□□□ 0.89
KRT28-201ENST00000306658 NAV1Q8NEY1 1877 aa20.62■□□□□ 0.89
KRT28-201ENST00000306658 GOLGB1Q14789 3259 aaKnown RBP20.61■□□□□ 0.89
KRT28-201ENST00000306658 PSMD14O00487 310 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 SH2B2O14492 632 aaPredicted RBP20.61■□□□□ 0.89
KRT28-201ENST00000306658 IFIT3O14879 490 aaKnown RBP20.61■□□□□ 0.89
KRT28-201ENST00000306658 CYP2D6P10635 497 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 PDIA3P30101 505 aaKnown RBP20.61■□□□□ 0.89
KRT28-201ENST00000306658 TMEM67Q5HYA8 995 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 IGDCC4Q8TDY8 1250 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 ARFGEF1Q9Y6D6 1849 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 SMIM22K7EJ46 135 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 LIFRP42702 1097 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 RAB3GAP1Q15042 981 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 CDC42EP5Q6NZY7 148 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 TMTC2Q8N394 836 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 NKX2-3Q8TAU0 364 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 UBAC1Q9BSL1 405 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 ZNF287Q9HBT7 754 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 GPHNQ9NQX3 736 aaPredicted RBP20.61■□□□□ 0.89
KRT28-201ENST00000306658 SAP30BPQ9UHR5 308 aaKnown RBP20.61■□□□□ 0.89
KRT28-201ENST00000306658 HDAC9Q9UKV0 1011 aa20.61■□□□□ 0.89
KRT28-201ENST00000306658 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.61■□□□□ 0.89
KRT28-201ENST00000306658 COL4A5P29400 1685 aa20.6■□□□□ 0.89
KRT28-201ENST00000306658 KLF18A0A0U1RQI7 1052 aa20.6■□□□□ 0.89
KRT28-201ENST00000306658 RANBP6O60518 1105 aaKnown RBP20.6■□□□□ 0.89
KRT28-201ENST00000306658 ST3GAL1Q11201 340 aa20.6■□□□□ 0.89
KRT28-201ENST00000306658 OGFOD1Q8N543 542 aa20.6■□□□□ 0.89
KRT28-201ENST00000306658 ROBO3Q96MS0 1386 aa20.6■□□□□ 0.89
KRT28-201ENST00000306658 WDHD1O75717 1129 aaPredicted RBP20.59■□□□□ 0.89
KRT28-201ENST00000306658 SCRN1Q12765 414 aa20.59■□□□□ 0.89
KRT28-201ENST00000306658 IQCA1Q86XH1 822 aa20.59■□□□□ 0.89
KRT28-201ENST00000306658 AGBL3Q8NEM8 1001 aa20.59■□□□□ 0.89
KRT28-201ENST00000306658 LLPHQ9BRT6 129 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms