RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 ANGEL1Q9UNK9 670 aaKnown RBP13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 COL2A1P02458 1487 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 DOCK1Q14185 1865 aa13.27□□□□□ -0.28
CSPG4P1Y-201ENST00000306641 TRIM6-TRIM34B2RNG4 842 aa13.27□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 ZFYP08048 801 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 DYNLL1P63167 89 aaKnown RBP13.27□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 GRM1Q13255 1194 aa13.27□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 PLEKHM2Q8IWE5 1019 aa13.27□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 TGFBRAP1Q8WUH2 860 aa13.27□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 HHIPL1Q96JK4 782 aa13.27□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 TEPSINQ96N21 525 aa13.27□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 CRNKL1Q9BZJ0 848 aaKnown RBP13.27□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 OSBPL5Q9H0X9 879 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 THSD7BQ9C0I4 1608 aa13.27□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 TCRBV5S4A2TA0A5A2 114 aa13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 SIPA1L1O43166 1804 aa13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 NPM3O75607 178 aaKnown RBP13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 FLT1P17948 1338 aa13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 UBE3CQ15386 1083 aa13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 RGMBQ6NW40 437 aa13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 MAPKAPK5Q8IW41 473 aa13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 RILPL2Q969X0 211 aa13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 AIDAQ96BJ3 306 aa13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 EVI5LQ96CN4 794 aa13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 KLRG1Q96E93 195 aa13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 CSRNP1Q96S65 589 aa13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 OSBPL3Q9H4L5 887 aa13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 DDX4Q9NQI0 724 aaKnown RBP13.26□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 RNF113AO15541 343 aaKnown RBP13.25□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 MBD4O95243 580 aa13.25□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 ZNF157P51786 506 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 ERICH6BQ5W0A0 696 aa13.25□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 CYP4F22Q6NT55 531 aa13.25□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 MOB2Q70IA6 237 aa13.25□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 CDAN1Q8IWY9 1227 aa13.25□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 APPBP2Q92624 585 aa13.25□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 DDRGK1Q96HY6 314 aa13.25□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 TRIM34Q9BYJ4 488 aa13.25□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 ZNF341Q9BYN7 854 aa13.25□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 DHX36Q9H2U1 1008 aaKnown RBP13.25□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 ATRNL1Q5VV63 1379 aa13.24□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 HLA-DOAP06340 250 aa13.24□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 MAP3K11Q16584 847 aa13.24□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 ANKRD13AQ8IZ07 590 aa13.24□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 LCORLQ8N3X6 602 aa13.24□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 CAPNS2Q96L46 248 aa13.24□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 RIOK1Q9BRS2 568 aaKnown RBP13.24□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 FZD1Q9UP38 647 aa13.24□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 CSADQ9Y600 493 aa13.24□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 WDR33Q9C0J8 1336 aaKnown RBP13.23□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 UNCXA6NJT0 531 aa13.23□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 PDE4AP27815 886 aa13.23□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 ZFPM1Q8IX07 1006 aa13.23□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 AMOTL1Q8IY63 956 aa13.23□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 CCDC102AQ96A19 550 aa13.23□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 WRNIP1Q96S55 665 aa13.23□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 ARMT1Q9H993 441 aa13.23□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 DDTLA6NHG4 134 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 USP2O75604 605 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 SLC10A3P09131 477 aa13.22□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 VEGFBP49765 207 aa13.22□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 SLFNL1Q499Z3 407 aa13.22□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 MIGA2Q7L4E1 593 aa13.22□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 RASAL3Q86YV0 1011 aa13.22□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 CRACR2BQ8N4Y2 399 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 PPP4R2Q9NY27 417 aa13.22□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 SAP30BPQ9UHR5 308 aaKnown RBP13.22□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 GPAA1O43292 621 aa13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 CHGBP05060 677 aa13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 POLR3DP05423 398 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 GNAT2P19087 354 aa13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 MAP3K9P80192 1104 aa13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 NOGQ13253 232 aa13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 TTC22Q5TAA0 569 aa13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 SH3BP5LQ7L8J4 393 aa13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 TTC6Q86TZ1 520 aa13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 TICAM2Q86XR7 235 aa13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 SDR42E1Q8WUS8 393 aa13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 SLC10A4Q96EP9 437 aa13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 PUS7LQ9H0K6 701 aaKnown RBP13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 PI4KBQ9UBF8 816 aa13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 HERC5Q9UII4 1024 aaKnown RBP13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 SLC4A4Q9Y6R1 1079 aa13.21□□□□□ -0.29
CSPG4P1Y-201ENST00000306641 HIP1O00291 1037 aa13.2□□□□□ -0.3
CSPG4P1Y-201ENST00000306641 SLC4A8Q2Y0W8 1093 aa13.2□□□□□ -0.3
CSPG4P1Y-201ENST00000306641 LDLRAD1Q5T700 205 aa13.2□□□□□ -0.3
CSPG4P1Y-201ENST00000306641 DNAJC5GQ8N7S2 189 aa13.2□□□□□ -0.3
CSPG4P1Y-201ENST00000306641 OSBP2Q969R2 916 aa13.2□□□□□ -0.3
CSPG4P1Y-201ENST00000306641 ELP3Q9H9T3 547 aa13.2□□□□□ -0.3
CSPG4P1Y-201ENST00000306641 DIAPH3Q9NSV4 1193 aa13.2□□□□□ -0.3
CSPG4P1Y-201ENST00000306641 ATP8A2Q9NTI2 1148 aa13.2□□□□□ -0.3
CSPG4P1Y-201ENST00000306641 MCM9Q9NXL9 1143 aa13.2□□□□□ -0.3
CSPG4P1Y-201ENST00000306641 PALD1Q9ULE6 856 aa13.2□□□□□ -0.3
CSPG4P1Y-201ENST00000306641 PHIPQ8WWQ0 1821 aa13.2□□□□□ -0.3
CSPG4P1Y-201ENST00000306641 PTPRFP10586 1907 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms