RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 GLT8D2Q9H1C3 349 aa17.94■□□□□ 0.46
USP42-201ENST00000306177 ROBO2Q9HCK4 1378 aa17.94■□□□□ 0.46
USP42-201ENST00000306177 KARSQ15046 597 aaKnown RBP17.94■□□□□ 0.46
USP42-201ENST00000306177 FMNL3Q8IVF7 1028 aa17.94■□□□□ 0.46
USP42-201ENST00000306177 CCDC97Q96F63 343 aaPredicted RBP17.94■□□□□ 0.46
USP42-201ENST00000306177 ZNF532Q9HCE3 1301 aa17.94■□□□□ 0.46
USP42-201ENST00000306177 ZBTB21Q9ULJ3 1066 aa17.94■□□□□ 0.46
USP42-201ENST00000306177 AKR1B15C9JRZ8 316 aaPredicted RBP17.94■□□□□ 0.46
USP42-201ENST00000306177 TM6SF1Q9BZW5 370 aa17.94■□□□□ 0.46
USP42-201ENST00000306177 ZNF569Q5MCW4 686 aa17.93■□□□□ 0.46
USP42-201ENST00000306177 CCDC24Q8N4L8 307 aa17.93■□□□□ 0.46
USP42-201ENST00000306177 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.93■□□□□ 0.46
USP42-201ENST00000306177 HECW2Q9P2P5 1572 aa17.93■□□□□ 0.46
USP42-201ENST00000306177 CCT6AP40227 531 aaKnown RBP17.93■□□□□ 0.46
USP42-201ENST00000306177 BEND3Q5T5X7 828 aa17.93■□□□□ 0.46
USP42-201ENST00000306177 BAG1Q99933 345 aaPredicted RBP17.93■□□□□ 0.46
USP42-201ENST00000306177 CTNND2Q9UQB3 1225 aa17.93■□□□□ 0.46
USP42-201ENST00000306177 CTDSPL2Q05D32 466 aa17.93■□□□□ 0.46
USP42-201ENST00000306177 NCBP1Q09161 790 aaKnown RBP17.93■□□□□ 0.46
USP42-201ENST00000306177 MCM6Q14566 821 aa17.93■□□□□ 0.46
USP42-201ENST00000306177 CLEC11AQ9Y240 323 aa17.93■□□□□ 0.46
USP42-201ENST00000306177 LEO1Q8WVC0 666 aaPredicted RBP17.92■□□□□ 0.46
USP42-201ENST00000306177 ARHGEF10LQ9HCE6 1279 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 PDE4DQ08499 809 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 TTC38Q5R3I4 469 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 CNNM4Q6P4Q7 775 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 TTLL7Q6ZT98 887 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 IGSF1Q8N6C5 1336 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 TRAF5O00463 557 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 HAUS3Q68CZ6 603 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 TSNARE1Q96NA8 513 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 USP21Q9UK80 565 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 CLASP1Q7Z460 1538 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 USP6P35125 1406 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 BACH1O14867 736 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 OPA1O60313 960 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 CCNT1O60563 726 aaKnown RBP17.92■□□□□ 0.46
USP42-201ENST00000306177 FAM173BQ6P4H8 233 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 SYT10Q6XYQ8 523 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 CCDC77Q9BR77 488 aa17.92■□□□□ 0.46
USP42-201ENST00000306177 PRDM15P57071 1507 aaPredicted RBP17.91■□□□□ 0.46
USP42-201ENST00000306177 NOC4LQ9BVI4 516 aaKnown RBP17.91■□□□□ 0.46
USP42-201ENST00000306177 TSGA10Q9BZW7 698 aa17.91■□□□□ 0.46
USP42-201ENST00000306177 ERBB4Q15303 1308 aa17.91■□□□□ 0.46
USP42-201ENST00000306177 CTSWP56202 376 aa17.91■□□□□ 0.46
USP42-201ENST00000306177 EDC3Q96F86 508 aaKnown RBP17.91■□□□□ 0.46
USP42-201ENST00000306177 RBSNQ9H1K0 784 aa17.91■□□□□ 0.46
USP42-201ENST00000306177 A0A1W2PRG0 241 aa17.91■□□□□ 0.46
USP42-201ENST00000306177 EEF2P13639 858 aaKnown RBP17.91■□□□□ 0.46
USP42-201ENST00000306177 TRIM14Q14142 442 aa17.91■□□□□ 0.46
USP42-201ENST00000306177 DCAF17Q5H9S7 520 aaPredicted RBP17.91■□□□□ 0.46
USP42-201ENST00000306177 OTUD7BQ6GQQ9 843 aa17.91■□□□□ 0.46
USP42-201ENST00000306177 ARHGEF25Q86VW2 580 aa17.91■□□□□ 0.46
USP42-201ENST00000306177 FRMD4BQ9Y2L6 1034 aa17.91■□□□□ 0.46
USP42-201ENST00000306177 CHD1O14646 1710 aa17.91■□□□□ 0.46
USP42-201ENST00000306177 GSPT1P15170 499 aaKnown RBP17.91■□□□□ 0.46
USP42-201ENST00000306177 EIF6P56537 245 aaKnown RBP17.91■□□□□ 0.46
USP42-201ENST00000306177 CAPZA3Q96KX2 299 aa17.91■□□□□ 0.46
USP42-201ENST00000306177 STK32BQ9NY57 414 aa17.91■□□□□ 0.46
USP42-201ENST00000306177 NPHP4O75161 1426 aaPredicted RBP17.9■□□□□ 0.46
USP42-201ENST00000306177 E7EWF7 191 aa17.9■□□□□ 0.46
USP42-201ENST00000306177 KRT40Q6A162 431 aa17.9■□□□□ 0.46
USP42-201ENST00000306177 COMMD10Q9Y6G5 202 aa17.9■□□□□ 0.46
USP42-201ENST00000306177 TMEM110-MUSTN1A8MSY1 372 aa17.9■□□□□ 0.46
USP42-201ENST00000306177 POLR2DO15514 142 aaKnown RBP17.9■□□□□ 0.46
USP42-201ENST00000306177 DPP8Q6V1X1 898 aaPredicted RBP17.9■□□□□ 0.46
USP42-201ENST00000306177 LZTS2Q9BRK4 669 aa17.9■□□□□ 0.46
USP42-201ENST00000306177 SSH2Q76I76 1423 aa17.9■□□□□ 0.46
USP42-201ENST00000306177 EPB41P11171 864 aaKnown RBP17.9■□□□□ 0.46
USP42-201ENST00000306177 TRMT2AQ8IZ69 625 aaKnown RBP17.9■□□□□ 0.46
USP42-201ENST00000306177 EAF2Q96CJ1 260 aaPredicted RBP17.9■□□□□ 0.46
USP42-201ENST00000306177 FAM212AQ96EL1 285 aa17.9■□□□□ 0.46
USP42-201ENST00000306177 MYL10Q9BUA6 226 aa17.9■□□□□ 0.46
USP42-201ENST00000306177 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.9■□□□□ 0.46
USP42-201ENST00000306177 V9GYY5 206 aaPredicted RBP17.9■□□□□ 0.46
USP42-201ENST00000306177 TBC1D8BQ0IIM8 1120 aa17.89■□□□□ 0.46
USP42-201ENST00000306177 KRT25Q7Z3Z0 450 aa17.89■□□□□ 0.46
USP42-201ENST00000306177 IGSF22Q8N9C0 903 aa17.89■□□□□ 0.46
USP42-201ENST00000306177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.89■□□□□ 0.46
USP42-201ENST00000306177 ATP2A1O14983 1001 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 GJC1P36383 396 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 RAPGEF1Q13905 1077 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 MLKLQ8NB16 471 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 MSANTD4Q8NCY6 345 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 KIF1BO60333 1816 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 NONOQ15233 471 aaKnown RBP eCLIP17.89■□□□□ 0.45
USP42-201ENST00000306177 CDC37L1Q7L3B6 337 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 PHKBQ93100 1093 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 CEP83Q9Y592 693 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 SHROOM2Q13796 1616 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 PRR36Q9H6K5 1346 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 CCDC122Q5T0U0 273 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 FCHSD1Q86WN1 690 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 PPP1R14CQ8TAE6 165 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 LRRC45Q96CN5 670 aa17.89■□□□□ 0.45
USP42-201ENST00000306177 STMN4Q9H169 189 aaPredicted RBP17.89■□□□□ 0.45
USP42-201ENST00000306177 TUBBP07437 444 aa17.88■□□□□ 0.45
USP42-201ENST00000306177 GSTA5Q7RTV2 222 aa17.88■□□□□ 0.45
USP42-201ENST00000306177 TXKP42681 527 aa17.88■□□□□ 0.45
USP42-201ENST00000306177 SP4Q02446 784 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms