RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 USP44Q9H0E7 712 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 SIL1Q9H173 461 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 ERC2O15083 957 aa9.41□□□□□ -0.9
TM4SF1-201ENST00000305366 SMARCA5O60264 1052 aaPredicted RBP9.41□□□□□ -0.9
TM4SF1-201ENST00000305366 HSP90AA1P07900 732 aaKnown RBP9.41□□□□□ -0.9
TM4SF1-201ENST00000305366 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.41□□□□□ -0.9
TM4SF1-201ENST00000305366 MIGA2Q7L4E1 593 aa9.41□□□□□ -0.9
TM4SF1-201ENST00000305366 OTOP1Q7RTM1 612 aa9.41□□□□□ -0.9
TM4SF1-201ENST00000305366 TEKT1Q969V4 418 aa9.41□□□□□ -0.9
TM4SF1-201ENST00000305366 TEPSINQ96N21 525 aa9.41□□□□□ -0.9
TM4SF1-201ENST00000305366 CSADQ9Y600 493 aa9.41□□□□□ -0.9
TM4SF1-201ENST00000305366 SSC5DA1L4H1 1573 aa9.41□□□□□ -0.9
TM4SF1-201ENST00000305366 CCL15-CCL14A0A0B4J2E2 113 aa9.4□□□□□ -0.9
TM4SF1-201ENST00000305366 SLC34A2O95436 690 aa9.4□□□□□ -0.9
TM4SF1-201ENST00000305366 IFIT1P09914 478 aaKnown RBP9.4□□□□□ -0.9
TM4SF1-201ENST00000305366 MRE11P49959 708 aa9.4□□□□□ -0.9
TM4SF1-201ENST00000305366 VGLL4Q14135 290 aa9.4□□□□□ -0.9
TM4SF1-201ENST00000305366 CCL15Q16663 113 aa9.4□□□□□ -0.9
TM4SF1-201ENST00000305366 ZKSCAN4Q969J2 545 aaPredicted RBP9.4□□□□□ -0.9
TM4SF1-201ENST00000305366 CWC22Q9HCG8 908 aaKnown RBP9.4□□□□□ -0.9
TM4SF1-201ENST00000305366 STAP2Q9UGK3 403 aa9.4□□□□□ -0.9
TM4SF1-201ENST00000305366 EPB41L2O43491 1005 aaKnown RBP9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 XRCC6P12956 609 aaKnown RBP eCLIP9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 SP3Q02447 781 aa9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 TCP10Q12799 353 aa9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 TAF1CQ15572 869 aaPredicted RBP9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 RABL6Q3YEC7 729 aaPredicted RBP9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 NOM1Q5C9Z4 860 aaKnown RBP9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 TBC1D22AQ8WUA7 517 aa9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 BRI3BPQ8WY22 251 aa9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 IL17RAQ96F46 866 aa9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 ERO1AQ96HE7 468 aa9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 CFHR5Q9BXR6 569 aa9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 LRRCC1Q9C099 1032 aa9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 EFCC1Q9HA90 598 aa9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 TMOD2Q9NZR1 351 aa9.4□□□□□ -0.91
TM4SF1-201ENST00000305366 UTYO14607 1347 aa9.39□□□□□ -0.91
TM4SF1-201ENST00000305366 SPEF2Q9C093 1822 aa9.39□□□□□ -0.91
TM4SF1-201ENST00000305366 POTEFA5A3E0 1075 aa9.39□□□□□ -0.91
TM4SF1-201ENST00000305366 EYA2O00167 538 aa9.39□□□□□ -0.91
TM4SF1-201ENST00000305366 ST18O60284 1047 aa9.39□□□□□ -0.91
TM4SF1-201ENST00000305366 SLC5A1P13866 664 aa9.39□□□□□ -0.91
TM4SF1-201ENST00000305366 NUCB2P80303 420 aa9.39□□□□□ -0.91
TM4SF1-201ENST00000305366 CAP1Q01518 475 aa9.39□□□□□ -0.91
TM4SF1-201ENST00000305366 PUM3Q15397 648 aaKnown RBP9.39□□□□□ -0.91
TM4SF1-201ENST00000305366 VGLL2Q8N8G2 317 aa9.39□□□□□ -0.91
TM4SF1-201ENST00000305366 MS4A4AQ96JQ5 239 aa9.39□□□□□ -0.91
TM4SF1-201ENST00000305366 WRNIP1Q96S55 665 aa9.39□□□□□ -0.91
TM4SF1-201ENST00000305366 U3KPZ7 1027 aaPredicted RBP9.39□□□□□ -0.91
TM4SF1-201ENST00000305366 COL1A1P02452 1464 aaPredicted RBP9.38□□□□□ -0.91
TM4SF1-201ENST00000305366 GOLGA6L22H0YM25 854 aa9.38□□□□□ -0.91
TM4SF1-201ENST00000305366 CYP2E1P05181 493 aaPredicted RBP9.38□□□□□ -0.91
TM4SF1-201ENST00000305366 GTF2A2P52657 109 aa9.38□□□□□ -0.91
TM4SF1-201ENST00000305366 DIXDC1Q155Q3 683 aa9.38□□□□□ -0.91
TM4SF1-201ENST00000305366 APOBEC3HQ6NTF7 200 aaKnown RBP9.38□□□□□ -0.91
TM4SF1-201ENST00000305366 ZFYVE28Q9HCC9 887 aa9.38□□□□□ -0.91
TM4SF1-201ENST00000305366 PTPN22Q9Y2R2 807 aa9.38□□□□□ -0.91
TM4SF1-201ENST00000305366 PNMA6EA0A0J9YXQ4 647 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 UNCXA6NJT0 531 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 RAB11FIP3O75154 756 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 UBTFL1P0CB47 393 aaPredicted RBP9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 EN2P19622 333 aaPredicted RBP9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 MX1P20591 662 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 RFX5P48382 616 aaPredicted RBP9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.37□□□□□ -0.912e-13■□□□□ 11.3
TM4SF1-201ENST00000305366 SSH3Q8TE77 659 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 LPIN2Q92539 896 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 ZDHHC15Q96MV8 337 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 ARID3AQ99856 593 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 CEP126Q9P2H0 1117 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 PA2G4Q9UQ80 394 aaKnown RBP9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 EXOC6BQ9Y2D4 811 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 TESPA1A2RU30 521 aaPredicted RBP9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 APBB1O00213 710 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 IRF6O14896 467 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 FGFR2P21802 821 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 MCM2P49736 904 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 ANAPC15P60006 121 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 HDLBPQ00341 1268 aaKnown RBP9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 POLA2Q14181 598 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 PRPF38BQ5VTL8 546 aaKnown RBP9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 ESYT1Q9BSJ8 1104 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 GZF1Q9H116 711 aaPredicted RBP9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 USP40Q9NVE5 1235 aa9.37□□□□□ -0.91
TM4SF1-201ENST00000305366 BTBD19C9JJ37 291 aa9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 BAG4O95429 457 aaKnown RBP9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 CETPP11597 493 aa9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 PRDX5P30044 214 aa9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 INPP5BP32019 993 aa9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 ATP2B3Q16720 1220 aa9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 ATG9AQ7Z3C6 839 aa9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 WDR66Q8TBY9 1149 aa9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 TMEM106CQ9BVX2 250 aa9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 ARHGAP39Q9C0H5 1083 aa9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 ZMYND15Q9H091 742 aa9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 GRPEL1Q9HAV7 217 aa9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 GNL3LQ9NVN8 582 aaKnown RBP9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 LRRFIP2Q9Y608 721 aaKnown RBP9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 SNCAIPQ9Y6H5 919 aa9.36□□□□□ -0.91
TM4SF1-201ENST00000305366 SPDYE5A6NIY4 337 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 702.2 ms