RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 PICALMQ13492 652 aa32.32■■■□□ 2.76
CDKN2A-201ENST00000304494 DGKZQ13574 1117 aa32.32■■■□□ 2.76
CDKN2A-201ENST00000304494 ERO1BQ86YB8 467 aa32.32■■■□□ 2.76
CDKN2A-201ENST00000304494 CNKSR2Q8WXI2 1034 aa32.32■■■□□ 2.76
CDKN2A-201ENST00000304494 IL1RAPL2Q9NP60 686 aa32.32■■■□□ 2.76
CDKN2A-201ENST00000304494 ZNF112Q9UJU3 913 aa32.32■■■□□ 2.76
CDKN2A-201ENST00000304494 IGF2BP3O00425 579 aaKnown RBP eCLIP32.31■■■□□ 2.76
CDKN2A-201ENST00000304494 NPM3O75607 178 aaKnown RBP32.31■■■□□ 2.76
CDKN2A-201ENST00000304494 GTF2A2P52657 109 aa32.31■■■□□ 2.76
CDKN2A-201ENST00000304494 MAST2Q6P0Q8 1798 aa32.31■■■□□ 2.76
CDKN2A-201ENST00000304494 APBB1O00213 710 aa32.3■■■□□ 2.76
CDKN2A-201ENST00000304494 MS4A4AQ96JQ5 239 aa32.3■■■□□ 2.76
CDKN2A-201ENST00000304494 MCOLN1Q9GZU1 580 aa32.3■■■□□ 2.76
CDKN2A-201ENST00000304494 DDX4Q9NQI0 724 aaKnown RBP32.3■■■□□ 2.76
CDKN2A-201ENST00000304494 AK9Q5TCS8 1911 aa32.3■■■□□ 2.76
CDKN2A-201ENST00000304494 GPR25O00155 361 aa32.29■■■□□ 2.76
CDKN2A-201ENST00000304494 BAG3O95817 575 aa32.29■■■□□ 2.76
CDKN2A-201ENST00000304494 ZNF296Q8WUU4 475 aaPredicted RBP32.29■■■□□ 2.76
CDKN2A-201ENST00000304494 INPP5BP32019 993 aa32.28■■■□□ 2.76
CDKN2A-201ENST00000304494 PLCG2P16885 1265 aa32.27■■■□□ 2.76
CDKN2A-201ENST00000304494 SH3BP5LQ7L8J4 393 aa32.27■■■□□ 2.76
CDKN2A-201ENST00000304494 PIH1D3Q9NQM4 214 aaKnown RBP32.27■■■□□ 2.76
CDKN2A-201ENST00000304494 DOCK2Q92608 1830 aa32.27■■■□□ 2.76
CDKN2A-201ENST00000304494 ATRNL1Q5VV63 1379 aa32.27■■■□□ 2.76
CDKN2A-201ENST00000304494 DDTLA6NHG4 134 aaPredicted RBP32.26■■■□□ 2.75
CDKN2A-201ENST00000304494 IFIT2P09913 472 aaKnown RBP32.26■■■□□ 2.75
CDKN2A-201ENST00000304494 PPATQ06203 517 aa32.26■■■□□ 2.75
CDKN2A-201ENST00000304494 PPIL2Q13356 520 aa32.26■■■□□ 2.75
CDKN2A-201ENST00000304494 NOL9Q5SY16 702 aaKnown RBP32.26■■■□□ 2.75
CDKN2A-201ENST00000304494 CTU1Q7Z7A3 348 aaKnown RBP32.26■■■□□ 2.75
CDKN2A-201ENST00000304494 TEX11Q8IYF3 940 aa32.26■■■□□ 2.75
CDKN2A-201ENST00000304494 PTPN18Q99952 460 aa32.26■■■□□ 2.75
CDKN2A-201ENST00000304494 CCL15-CCL14A0A0B4J2E2 113 aa32.25■■■□□ 2.75
CDKN2A-201ENST00000304494 CCL15Q16663 113 aa32.25■■■□□ 2.75
CDKN2A-201ENST00000304494 COL2A1P02458 1487 aaPredicted RBP32.24■■■□□ 2.75
CDKN2A-201ENST00000304494 CETPP11597 493 aa32.24■■■□□ 2.75
CDKN2A-201ENST00000304494 MAP3K10Q02779 954 aa32.24■■■□□ 2.75
CDKN2A-201ENST00000304494 SNAPC2Q13487 334 aa32.24■■■□□ 2.75
CDKN2A-201ENST00000304494 TMED8Q6PL24 325 aaPredicted RBP32.24■■■□□ 2.75
CDKN2A-201ENST00000304494 BRI3BPQ8WY22 251 aa32.24■■■□□ 2.75
CDKN2A-201ENST00000304494 YTHDC1Q96MU7 727 aaKnown RBP32.24■■■□□ 2.75
CDKN2A-201ENST00000304494 AATFQ9NY61 560 aaKnown RBP eCLIP32.24■■■□□ 2.75
CDKN2A-201ENST00000304494 IRF6O14896 467 aa32.23■■■□□ 2.75
CDKN2A-201ENST00000304494 FKTNO75072 461 aa32.23■■■□□ 2.75
CDKN2A-201ENST00000304494 IDH1O75874 414 aaKnown RBP32.23■■■□□ 2.75
CDKN2A-201ENST00000304494 PPP4CP60510 307 aa32.23■■■□□ 2.75
CDKN2A-201ENST00000304494 SH3RF3Q8TEJ3 882 aaPredicted RBP32.23■■■□□ 2.75
CDKN2A-201ENST00000304494 R3HDMLQ9H3Y0 253 aa32.23■■■□□ 2.75
CDKN2A-201ENST00000304494 OSBPL5Q9H0X9 879 aaPredicted RBP32.22■■■□□ 2.75
CDKN2A-201ENST00000304494 PHF20L1A8MW92 1017 aa32.21■■■□□ 2.75
CDKN2A-201ENST00000304494 MAP3K12Q12852 859 aa32.21■■■□□ 2.75
CDKN2A-201ENST00000304494 CRHR2Q13324 411 aa32.21■■■□□ 2.75
CDKN2A-201ENST00000304494 TTF1Q15361 905 aaPredicted RBP32.21■■■□□ 2.75
CDKN2A-201ENST00000304494 ADGRA1Q86SQ6 560 aa32.21■■■□□ 2.75
CDKN2A-201ENST00000304494 PPIL4Q8WUA2 492 aaKnown RBP eCLIP32.21■■■□□ 2.75
CDKN2A-201ENST00000304494 TBC1D12O60347 775 aa32.2■■■□□ 2.75
CDKN2A-201ENST00000304494 CYP7A1P22680 504 aa32.2■■■□□ 2.75
CDKN2A-201ENST00000304494 NDUFB9Q9Y6M9 179 aa32.2■■■□□ 2.75
CDKN2A-201ENST00000304494 RRP1P56182 461 aaKnown RBP32.19■■■□□ 2.74
CDKN2A-201ENST00000304494 PKN2Q16513 984 aaKnown RBP32.19■■■□□ 2.74
CDKN2A-201ENST00000304494 CERS3Q8IU89 383 aa32.19■■■□□ 2.74
CDKN2A-201ENST00000304494 SCYL3Q8IZE3 742 aa32.19■■■□□ 2.74
CDKN2A-201ENST00000304494 LRRCC1Q9C099 1032 aa32.19■■■□□ 2.74
CDKN2A-201ENST00000304494 BCL11AQ9H165 835 aa32.19■■■□□ 2.74
CDKN2A-201ENST00000304494 ANTXR1Q9H6X2 564 aa32.19■■■□□ 2.74
CDKN2A-201ENST00000304494 ZCCHC17Q9NP64 241 aaKnown RBP32.19■■■□□ 2.74
CDKN2A-201ENST00000304494 PICK1Q9NRD5 415 aa32.19■■■□□ 2.74
CDKN2A-201ENST00000304494 CTNND1O60716 968 aaKnown RBP32.17■■■□□ 2.74
CDKN2A-201ENST00000304494 MAGEB6Q8N7X4 407 aa32.17■■■□□ 2.74
CDKN2A-201ENST00000304494 DHX36Q9H2U1 1008 aaKnown RBP32.17■■■□□ 2.74
CDKN2A-201ENST00000304494 KCNH4Q9UQ05 1017 aa32.17■■■□□ 2.74
CDKN2A-201ENST00000304494 CCDC85CA6NKD9 419 aa32.16■■■□□ 2.74
CDKN2A-201ENST00000304494 TAF1CQ15572 869 aaPredicted RBP32.16■■■□□ 2.74
CDKN2A-201ENST00000304494 FAM43AQ8N2R8 423 aa32.16■■■□□ 2.74
CDKN2A-201ENST00000304494 TGFBRAP1Q8WUH2 860 aa32.16■■■□□ 2.74
CDKN2A-201ENST00000304494 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.16■■■□□ 2.74
CDKN2A-201ENST00000304494 ZFYVE28Q9HCC9 887 aa32.16■■■□□ 2.74
CDKN2A-201ENST00000304494 MYO5AQ9Y4I1 1855 aaKnown RBP32.16■■■□□ 2.74
CDKN2A-201ENST00000304494 PI4KBQ9UBF8 816 aa32.14■■■□□ 2.74
CDKN2A-201ENST00000304494 BTBD19C9JJ37 291 aa32.13■■■□□ 2.73
CDKN2A-201ENST00000304494 FLT1P17948 1338 aa32.13■■■□□ 2.73
CDKN2A-201ENST00000304494 PTPRAP18433 802 aa32.13■■■□□ 2.73
CDKN2A-201ENST00000304494 MAPKAPK5Q8IW41 473 aa32.13■■■□□ 2.73
CDKN2A-201ENST00000304494 DNAJC2Q99543 621 aaKnown RBP32.13■■■□□ 2.73
CDKN2A-201ENST00000304494 HERC5Q9UII4 1024 aaKnown RBP32.13■■■□□ 2.73
CDKN2A-201ENST00000304494 CXCL11O14625 94 aa32.12■■■□□ 2.73
CDKN2A-201ENST00000304494 ERO1AQ96HE7 468 aa32.12■■■□□ 2.73
CDKN2A-201ENST00000304494 ZHX2Q9Y6X8 837 aa32.12■■■□□ 2.73
CDKN2A-201ENST00000304494 GOLIM4O00461 696 aa32.11■■■□□ 2.73
CDKN2A-201ENST00000304494 SLURP2P0DP57 97 aa32.11■■■□□ 2.73
CDKN2A-201ENST00000304494 ATP5JP18859 108 aa32.11■■■□□ 2.73
CDKN2A-201ENST00000304494 DYNLL1P63167 89 aaKnown RBP32.11■■■□□ 2.73
CDKN2A-201ENST00000304494 MIGA1Q8NAN2 632 aa32.11■■■□□ 2.73
CDKN2A-201ENST00000304494 DCTPP1Q9H773 170 aa32.11■■■□□ 2.73
CDKN2A-201ENST00000304494 SP3Q02447 781 aa32.1■■■□□ 2.73
CDKN2A-201ENST00000304494 ANKRD23Q86SG2 305 aa32.1■■■□□ 2.73
CDKN2A-201ENST00000304494 DOCK1Q14185 1865 aa32.1■■■□□ 2.73
CDKN2A-201ENST00000304494 FAM196BA6NMK8 535 aa32.09■■■□□ 2.73
CDKN2A-201ENST00000304494 SLC9C2Q5TAH2 1124 aa32.09■■■□□ 2.73
CDKN2A-201ENST00000304494 FOCADQ5VW36 1801 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms