RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 CA12O43570 354 aa20.51■□□□□ 0.87
NDUFA3-201ENST00000303553 CSRNP1Q96S65 589 aa20.51■□□□□ 0.87
NDUFA3-201ENST00000303553 ZNF341Q9BYN7 854 aa20.51■□□□□ 0.87
NDUFA3-201ENST00000303553 FZD1Q9UP38 647 aa20.51■□□□□ 0.87
NDUFA3-201ENST00000303553 CSADQ9Y600 493 aa20.51■□□□□ 0.87
NDUFA3-201ENST00000303553 LAMB1P07942 1786 aa20.51■□□□□ 0.87
NDUFA3-201ENST00000303553 PCNTO95613 3336 aa20.51■□□□□ 0.87
NDUFA3-201ENST00000303553 ATRNL1Q5VV63 1379 aa20.5■□□□□ 0.87
NDUFA3-201ENST00000303553 ZBTB48P10074 688 aaPredicted RBP20.5■□□□□ 0.87
NDUFA3-201ENST00000303553 SLC9C2Q5TAH2 1124 aa20.5■□□□□ 0.87
NDUFA3-201ENST00000303553 ANKRD45Q5TZF3 282 aa20.5■□□□□ 0.87
NDUFA3-201ENST00000303553 ZSCAN25Q6NSZ9 544 aa20.5■□□□□ 0.87
NDUFA3-201ENST00000303553 ADGRA1Q86SQ6 560 aa20.5■□□□□ 0.87
NDUFA3-201ENST00000303553 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.5■□□□□ 0.871e-8■■□□□ 12
NDUFA3-201ENST00000303553 MAP3K9P80192 1104 aa20.49■□□□□ 0.87
NDUFA3-201ENST00000303553 KIF23Q02241 960 aaPredicted RBP20.49■□□□□ 0.87
NDUFA3-201ENST00000303553 SH3RF3Q8TEJ3 882 aaPredicted RBP20.49■□□□□ 0.87
NDUFA3-201ENST00000303553 WRNIP1Q96S55 665 aa20.49■□□□□ 0.87
NDUFA3-201ENST00000303553 DDX4Q9NQI0 724 aaKnown RBP20.49■□□□□ 0.87
NDUFA3-201ENST00000303553 PDE6AP16499 860 aa20.48■□□□□ 0.87
NDUFA3-201ENST00000303553 MX1P20591 662 aa20.48■□□□□ 0.87
NDUFA3-201ENST00000303553 SREBF2Q12772 1141 aa20.48■□□□□ 0.87
NDUFA3-201ENST00000303553 SMC5Q8IY18 1101 aa20.48■□□□□ 0.87
NDUFA3-201ENST00000303553 OSBPL5Q9H0X9 879 aaPredicted RBP20.48■□□□□ 0.87
NDUFA3-201ENST00000303553 GLRX3O76003 335 aaKnown RBP20.47■□□□□ 0.87
NDUFA3-201ENST00000303553 VGLL4Q14135 290 aa20.47■□□□□ 0.87
NDUFA3-201ENST00000303553 SPRYD7Q5W111 196 aa20.47■□□□□ 0.87
NDUFA3-201ENST00000303553 MIGA1Q8NAN2 632 aa20.47■□□□□ 0.87
NDUFA3-201ENST00000303553 CLMNQ96JQ2 1002 aa20.47■□□□□ 0.87
NDUFA3-201ENST00000303553 DHX36Q9H2U1 1008 aaKnown RBP20.47■□□□□ 0.87
NDUFA3-201ENST00000303553 MAGEB6P1A0A0J9YX57 407 aa20.46■□□□□ 0.87
NDUFA3-201ENST00000303553 CTCFP49711 727 aaPredicted RBP20.46■□□□□ 0.87
NDUFA3-201ENST00000303553 LRRFIP1Q32MZ4 808 aaKnown RBP20.46■□□□□ 0.87
NDUFA3-201ENST00000303553 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.46■□□□□ 0.87
NDUFA3-201ENST00000303553 MIGA2Q7L4E1 593 aa20.46■□□□□ 0.87
NDUFA3-201ENST00000303553 ZFPM1Q8IX07 1006 aa20.46■□□□□ 0.87
NDUFA3-201ENST00000303553 WNK4Q96J92 1243 aa20.46■□□□□ 0.87
NDUFA3-201ENST00000303553 FLT1P17948 1338 aa20.46■□□□□ 0.87
NDUFA3-201ENST00000303553 ZNF532Q9HCE3 1301 aa20.46■□□□□ 0.87
NDUFA3-201ENST00000303553 DDTLA6NHG4 134 aaPredicted RBP20.45■□□□□ 0.86
NDUFA3-201ENST00000303553 MANSC4A6NHS7 340 aaPredicted RBP20.45■□□□□ 0.86
NDUFA3-201ENST00000303553 IRX6P78412 446 aaPredicted RBP20.45■□□□□ 0.86
NDUFA3-201ENST00000303553 TGFBRAP1Q8WUH2 860 aa20.45■□□□□ 0.86
NDUFA3-201ENST00000303553 EDC3Q96F86 508 aaKnown RBP20.45■□□□□ 0.86
NDUFA3-201ENST00000303553 ELP3Q9H9T3 547 aa20.45■□□□□ 0.86
NDUFA3-201ENST00000303553 SAGE1Q9NXZ1 904 aa20.45■□□□□ 0.86
NDUFA3-201ENST00000303553 ADD2P35612 726 aa20.44■□□□□ 0.86
NDUFA3-201ENST00000303553 USP5P45974 858 aa20.44■□□□□ 0.86
NDUFA3-201ENST00000303553 INHBEP58166 350 aa20.44■□□□□ 0.86
NDUFA3-201ENST00000303553 UBE3CQ15386 1083 aa20.44■□□□□ 0.86
NDUFA3-201ENST00000303553 SH3BP5LQ7L8J4 393 aa20.44■□□□□ 0.86
NDUFA3-201ENST00000303553 OPTNQ96CV9 577 aa20.44■□□□□ 0.86
NDUFA3-201ENST00000303553 ZIC5Q96T25 663 aa20.44■□□□□ 0.86
NDUFA3-201ENST00000303553 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.44■□□□□ 0.86
NDUFA3-201ENST00000303553 ZNF112Q9UJU3 913 aa20.44■□□□□ 0.86
NDUFA3-201ENST00000303553 MYH1P12882 1939 aa20.44■□□□□ 0.86
NDUFA3-201ENST00000303553 NAV1Q8NEY1 1877 aa20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 TCRBV5S4A2TA0A5A2 114 aa20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 FOXN1O15353 648 aa20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 TBC1D12O60347 775 aa20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 HLA-DOAP06340 250 aa20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 DYNLL1P63167 89 aaKnown RBP20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 MAP3K10Q02779 954 aa20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 MKRN3Q13064 507 aaKnown RBP20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 TSHZ3Q63HK5 1081 aa20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 ERO1BQ86YB8 467 aa20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 MAPKAPK5Q8IW41 473 aa20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 KBTBD3Q8NAB2 608 aa20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 CRNKL1Q9BZJ0 848 aaKnown RBP20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 PI4KBQ9UBF8 816 aa20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 HERC5Q9UII4 1024 aaKnown RBP20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 DOCK1Q14185 1865 aa20.43■□□□□ 0.86
NDUFA3-201ENST00000303553 SPDYE5A6NIY4 337 aa20.42■□□□□ 0.86
NDUFA3-201ENST00000303553 IGHDP01880 384 aa20.42■□□□□ 0.86
NDUFA3-201ENST00000303553 ZFYP08048 801 aaPredicted RBP20.42■□□□□ 0.86
NDUFA3-201ENST00000303553 NOL9Q5SY16 702 aaKnown RBP20.42■□□□□ 0.86
NDUFA3-201ENST00000303553 PI4K2BQ8TCG2 481 aa20.42■□□□□ 0.86
NDUFA3-201ENST00000303553 ZKSCAN4Q969J2 545 aaPredicted RBP20.42■□□□□ 0.86
NDUFA3-201ENST00000303553 RIOK1Q9BRS2 568 aaKnown RBP20.42■□□□□ 0.86
NDUFA3-201ENST00000303553 TRIM34Q9BYJ4 488 aa20.42■□□□□ 0.86
NDUFA3-201ENST00000303553 SNCAIPQ9Y6H5 919 aa20.42■□□□□ 0.86
NDUFA3-201ENST00000303553 SALL3Q9BXA9 1300 aa20.42■□□□□ 0.86
NDUFA3-201ENST00000303553 TM4SF4P48230 202 aa20.41■□□□□ 0.86
NDUFA3-201ENST00000303553 B4GALNT3Q6L9W6 998 aa20.41■□□□□ 0.86
NDUFA3-201ENST00000303553 CHD1LQ86WJ1 897 aa20.41■□□□□ 0.86
NDUFA3-201ENST00000303553 OTUD7AQ8TE49 926 aaPredicted RBP20.41■□□□□ 0.86
NDUFA3-201ENST00000303553 LNPKQ9C0E8 428 aa20.41■□□□□ 0.86
NDUFA3-201ENST00000303553 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.41■□□□□ 0.86
NDUFA3-201ENST00000303553 STAP2Q9UGK3 403 aa20.41■□□□□ 0.86
NDUFA3-201ENST00000303553 ALDH1A1P00352 501 aa20.4■□□□□ 0.86
NDUFA3-201ENST00000303553 INPP5BP32019 993 aa20.4■□□□□ 0.86
NDUFA3-201ENST00000303553 NUCB1Q02818 461 aa20.4■□□□□ 0.86
NDUFA3-201ENST00000303553 PPATQ06203 517 aa20.4■□□□□ 0.86
NDUFA3-201ENST00000303553 DDX60LQ5H9U9 1706 aaKnown RBP20.4■□□□□ 0.86
NDUFA3-201ENST00000303553 OTUD5Q96G74 571 aa20.4■□□□□ 0.86
NDUFA3-201ENST00000303553 CTNND1O60716 968 aaKnown RBP20.39■□□□□ 0.85
NDUFA3-201ENST00000303553 GTF2A2P52657 109 aa20.39■□□□□ 0.85
NDUFA3-201ENST00000303553 PDE1AP54750 535 aa20.39■□□□□ 0.85
NDUFA3-201ENST00000303553 PPIL2Q13356 520 aa20.39■□□□□ 0.85
NDUFA3-201ENST00000303553 OTUD7BQ6GQQ9 843 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms