RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 PTPRAP18433 802 aa8.18□□□□□ -1.1
ITGB1-201ENST00000302278 CAVIN4Q5BKX8 364 aa8.18□□□□□ -1.1
ITGB1-201ENST00000302278 CDC42EP5Q6NZY7 148 aa8.18□□□□□ -1.1
ITGB1-201ENST00000302278 PROCA1Q8NCQ7 364 aaPredicted RBP8.18□□□□□ -1.1
ITGB1-201ENST00000302278 MTMR10Q9NXD2 777 aa8.18□□□□□ -1.1
ITGB1-201ENST00000302278 AGTPBP1Q9UPW5 1226 aa8.18□□□□□ -1.1
ITGB1-201ENST00000302278 RFX5P48382 616 aaPredicted RBP8.17□□□□□ -1.1
ITGB1-201ENST00000302278 PUM3Q15397 648 aaKnown RBP8.17□□□□□ -1.1
ITGB1-201ENST00000302278 LRCH3Q96II8 777 aa8.17□□□□□ -1.1
ITGB1-201ENST00000302278 JAG2Q9Y219 1238 aa8.17□□□□□ -1.1
ITGB1-201ENST00000302278 PARP14Q460N5 1801 aa8.17□□□□□ -1.1
ITGB1-201ENST00000302278 SH3D19Q5HYK7 790 aa8.17□□□□□ -1.1
ITGB1-201ENST00000302278 MORF4L1Q9UBU8 362 aa8.17□□□□□ -1.1
ITGB1-201ENST00000302278 GJD2Q9UKL4 321 aa8.17□□□□□ -1.1
ITGB1-201ENST00000302278 NECAB2Q7Z6G3 386 aa8.17□□□□□ -1.1
ITGB1-201ENST00000302278 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.17□□□□□ -1.11e-13■■■■□ 20.9
ITGB1-201ENST00000302278 CTNND1O60716 968 aaKnown RBP8.16□□□□□ -1.1
ITGB1-201ENST00000302278 IGHA2P01877 340 aa8.16□□□□□ -1.1
ITGB1-201ENST00000302278 FLT3LGP49771 235 aa8.16□□□□□ -1.1
ITGB1-201ENST00000302278 CACNB3P54284 484 aa8.16□□□□□ -1.1
ITGB1-201ENST00000302278 TDHQ8IZJ6 230 aa8.16□□□□□ -1.1
ITGB1-201ENST00000302278 CIAO1O76071 339 aa8.16□□□□□ -1.1
ITGB1-201ENST00000302278 HMGCRP04035 888 aa8.16□□□□□ -1.1
ITGB1-201ENST00000302278 RPTORQ8N122 1335 aa8.16□□□□□ -1.1
ITGB1-201ENST00000302278 POTEB2H3BUK9 544 aa8.16□□□□□ -1.1
ITGB1-201ENST00000302278 SH3BP5LQ7L8J4 393 aa8.16□□□□□ -1.1
ITGB1-201ENST00000302278 TRMT44Q8IYL2 757 aaKnown RBP8.16□□□□□ -1.1
ITGB1-201ENST00000302278 CYP2C8P10632 490 aa8.15□□□□□ -1.1
ITGB1-201ENST00000302278 XRCC5P13010 732 aaKnown RBP8.15□□□□□ -1.1
ITGB1-201ENST00000302278 GCLCP48506 637 aaPredicted RBP8.15□□□□□ -1.1
ITGB1-201ENST00000302278 LRRC24Q50LG9 513 aa8.15□□□□□ -1.1
ITGB1-201ENST00000302278 TAF7LQ5H9L4 462 aa8.15□□□□□ -1.1
ITGB1-201ENST00000302278 LPIN2Q92539 896 aa8.15□□□□□ -1.1
ITGB1-201ENST00000302278 USP6NLQ92738 828 aa8.15□□□□□ -1.1
ITGB1-201ENST00000302278 SRCIN1Q9C0H9 1055 aa8.15□□□□□ -1.1
ITGB1-201ENST00000302278 COL6A3P12111 3177 aa8.15□□□□□ -1.1
ITGB1-201ENST00000302278 OSBPL5Q9H0X9 879 aaPredicted RBP8.15□□□□□ -1.1
ITGB1-201ENST00000302278 BICC1Q9H694 974 aaKnown RBP8.15□□□□□ -1.1
ITGB1-201ENST00000302278 STAP2Q9UGK3 403 aa8.15□□□□□ -1.1
ITGB1-201ENST00000302278 PTPRCP08575 1304 aa8.15□□□□□ -1.11
ITGB1-201ENST00000302278 ZNF521Q96K83 1311 aa8.15□□□□□ -1.11
ITGB1-201ENST00000302278 F6X3S4 739 aa8.15□□□□□ -1.11
ITGB1-201ENST00000302278 BCAMP50895 628 aa8.15□□□□□ -1.11
ITGB1-201ENST00000302278 NFIAQ12857 509 aa8.15□□□□□ -1.11
ITGB1-201ENST00000302278 C11orf49Q9H6J7 331 aa8.15□□□□□ -1.11
ITGB1-201ENST00000302278 PNMA3Q9UL41 463 aa8.15□□□□□ -1.11
ITGB1-201ENST00000302278 PFASO15067 1338 aa8.14□□□□□ -1.11
ITGB1-201ENST00000302278 RANBP2P49792 3224 aaKnown RBP8.14□□□□□ -1.11
ITGB1-201ENST00000302278 NBPF7P0C2Y1 421 aaPredicted RBP8.14□□□□□ -1.11
ITGB1-201ENST00000302278 ATG9AQ7Z3C6 839 aa8.14□□□□□ -1.11
ITGB1-201ENST00000302278 PAWRQ96IZ0 340 aaKnown RBP8.14□□□□□ -1.11
ITGB1-201ENST00000302278 TRIOBPQ9H2D6 2365 aa8.14□□□□□ -1.11
ITGB1-201ENST00000302278 IGSF3O75054 1194 aa8.14□□□□□ -1.11
ITGB1-201ENST00000302278 IFIT1P09914 478 aaKnown RBP8.14□□□□□ -1.11
ITGB1-201ENST00000302278 METTL16Q86W50 562 aaKnown RBP8.14□□□□□ -1.11
ITGB1-201ENST00000302278 DIS3LQ8TF46 1054 aaKnown RBP8.14□□□□□ -1.11
ITGB1-201ENST00000302278 DEFB118Q96PH6 123 aa8.14□□□□□ -1.11
ITGB1-201ENST00000302278 COL25A1Q9BXS0 654 aaPredicted RBP8.14□□□□□ -1.11
ITGB1-201ENST00000302278 TFRCP02786 760 aaKnown RBP8.14□□□□□ -1.11
ITGB1-201ENST00000302278 METTL24Q5JXM2 366 aa8.14□□□□□ -1.11
ITGB1-201ENST00000302278 MIGA2Q7L4E1 593 aa8.14□□□□□ -1.11
ITGB1-201ENST00000302278 DEFB123Q8N688 67 aa8.14□□□□□ -1.11
ITGB1-201ENST00000302278 COA7Q96BR5 231 aa8.14□□□□□ -1.11
ITGB1-201ENST00000302278 NBPF3Q9H094 633 aa8.14□□□□□ -1.11
ITGB1-201ENST00000302278 GINM1Q9NU53 330 aa8.14□□□□□ -1.11
ITGB1-201ENST00000302278 C9orf78Q9NZ63 289 aaPredicted RBP8.14□□□□□ -1.11
ITGB1-201ENST00000302278 CHMP3Q9Y3E7 222 aa8.14□□□□□ -1.11
ITGB1-201ENST00000302278 TNPO2O14787 897 aaKnown RBP8.13□□□□□ -1.11
ITGB1-201ENST00000302278 PLIN1O60240 522 aa8.13□□□□□ -1.11
ITGB1-201ENST00000302278 ELNP15502 786 aa8.13□□□□□ -1.11
ITGB1-201ENST00000302278 MAGEA10P43363 369 aaPredicted RBP8.13□□□□□ -1.11
ITGB1-201ENST00000302278 EXOSC9Q06265 439 aaKnown RBP8.13□□□□□ -1.11
ITGB1-201ENST00000302278 DDX10Q13206 875 aaKnown RBP8.13□□□□□ -1.11
ITGB1-201ENST00000302278 HOXA7P31268 230 aaPredicted RBP8.13□□□□□ -1.11
ITGB1-201ENST00000302278 VPS37DQ86XT2 251 aa8.13□□□□□ -1.11
ITGB1-201ENST00000302278 ZFPM1Q8IX07 1006 aa8.13□□□□□ -1.11
ITGB1-201ENST00000302278 GUCD1Q96NT3 240 aa8.13□□□□□ -1.11
ITGB1-201ENST00000302278 EYA2O00167 538 aa8.12□□□□□ -1.11
ITGB1-201ENST00000302278 SLC5A1P13866 664 aa8.12□□□□□ -1.11
ITGB1-201ENST00000302278 ZGPATQ8N5A5 531 aaKnown RBP8.12□□□□□ -1.11
ITGB1-201ENST00000302278 DENND2AQ9ULE3 1009 aa8.12□□□□□ -1.11
ITGB1-201ENST00000302278 GTF3C2Q8WUA4 911 aaPredicted RBP8.12□□□□□ -1.11
ITGB1-201ENST00000302278 SOCS4Q8WXH5 440 aa8.12□□□□□ -1.11
ITGB1-201ENST00000302278 WDR18Q9BV38 432 aa8.12□□□□□ -1.11
ITGB1-201ENST00000302278 PICK1Q9NRD5 415 aa8.12□□□□□ -1.11
ITGB1-201ENST00000302278 ZHX2Q9Y6X8 837 aa8.12□□□□□ -1.11
ITGB1-201ENST00000302278 CHAF1AQ13111 956 aaPredicted RBP8.12□□□□□ -1.11
ITGB1-201ENST00000302278 HMX1Q9NP08 348 aaPredicted RBP8.12□□□□□ -1.11
ITGB1-201ENST00000302278 USP40Q9NVE5 1235 aa8.12□□□□□ -1.11
ITGB1-201ENST00000302278 SPTBN5Q9NRC6 3674 aaKnown RBP8.11□□□□□ -1.11
ITGB1-201ENST00000302278 GPR75-ASB3A0A0A6YYF3 556 aa8.11□□□□□ -1.11
ITGB1-201ENST00000302278 MYCP01106 439 aaPredicted RBP8.11□□□□□ -1.11
ITGB1-201ENST00000302278 PRDX5P30044 214 aa8.11□□□□□ -1.11
ITGB1-201ENST00000302278 RGS3P49796 1198 aa8.11□□□□□ -1.11
ITGB1-201ENST00000302278 RHBDL3P58872 404 aa8.11□□□□□ -1.11
ITGB1-201ENST00000302278 PABPC4Q13310 644 aaKnown RBP eCLIP8.11□□□□□ -1.111e-8■□□□□ 8.9
ITGB1-201ENST00000302278 MORN1Q5T089 497 aa8.11□□□□□ -1.11
ITGB1-201ENST00000302278 TREML2Q5T2D2 321 aa8.11□□□□□ -1.11
ITGB1-201ENST00000302278 LHX8Q68G74 356 aa8.11□□□□□ -1.11
ITGB1-201ENST00000302278 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms