RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 PLCH1Q4KWH8 1693 aa27.82■■■□□ 2.04
FOXA3-201ENST00000302177 KIF2AO00139 706 aaPredicted RBP27.82■■■□□ 2.04
FOXA3-201ENST00000302177 EXOC5O00471 708 aa27.82■■■□□ 2.04
FOXA3-201ENST00000302177 CUTAO60888 179 aa27.82■■■□□ 2.04
FOXA3-201ENST00000302177 GNL2Q13823 731 aaKnown RBP27.82■■■□□ 2.04
FOXA3-201ENST00000302177 ARID5BQ14865 1188 aa27.82■■■□□ 2.04
FOXA3-201ENST00000302177 NKX2-3Q8TAU0 364 aa27.82■■■□□ 2.04
FOXA3-201ENST00000302177 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.82■■■□□ 2.04
FOXA3-201ENST00000302177 SLC12A7Q9Y666 1083 aa27.82■■■□□ 2.04
FOXA3-201ENST00000302177 PNPLA7Q6ZV29 1317 aa27.81■■■□□ 2.04
FOXA3-201ENST00000302177 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.81■■■□□ 2.04
FOXA3-201ENST00000302177 MYO1BO43795 1136 aa27.81■■■□□ 2.04
FOXA3-201ENST00000302177 NCAPHQ15003 741 aa27.81■■■□□ 2.04
FOXA3-201ENST00000302177 PTPN14Q15678 1187 aa27.81■■■□□ 2.04
FOXA3-201ENST00000302177 RESP18Q5W5W9 173 aa27.81■■■□□ 2.04
FOXA3-201ENST00000302177 MICU3Q86XE3 530 aa27.81■■■□□ 2.04
FOXA3-201ENST00000302177 PDCL2Q8N4E4 241 aa27.81■■■□□ 2.04
FOXA3-201ENST00000302177 AIFM3Q96NN9 605 aa27.81■■■□□ 2.04
FOXA3-201ENST00000302177 ZSWIM5Q9P217 1185 aa27.81■■■□□ 2.04
FOXA3-201ENST00000302177 DOCK2Q92608 1830 aa27.81■■■□□ 2.04
FOXA3-201ENST00000302177 FMNL1O95466 1100 aaPredicted RBP27.8■■■□□ 2.04
FOXA3-201ENST00000302177 IFNAR1P17181 557 aa27.8■■■□□ 2.04
FOXA3-201ENST00000302177 RCAN1P53805 252 aa27.8■■■□□ 2.04
FOXA3-201ENST00000302177 SSRP1Q08945 709 aaKnown RBP27.8■■■□□ 2.04
FOXA3-201ENST00000302177 AKNAD1Q5T1N1 836 aa27.8■■■□□ 2.04
FOXA3-201ENST00000302177 EPB41L4AQ9HCS5 686 aaPredicted RBP27.8■■■□□ 2.04
FOXA3-201ENST00000302177 COL14A1Q05707 1796 aaKnown RBP27.8■■■□□ 2.04
FOXA3-201ENST00000302177 TIAM2Q8IVF5 1701 aa27.8■■■□□ 2.04
FOXA3-201ENST00000302177 MARCKSP29966 332 aaPredicted RBP27.8■■■□□ 2.04
FOXA3-201ENST00000302177 EIF5P55010 431 aaKnown RBP27.8■■■□□ 2.04
FOXA3-201ENST00000302177 SHC4Q6S5L8 630 aa27.8■■■□□ 2.04
FOXA3-201ENST00000302177 CCAR2Q8N163 923 aaKnown RBP27.8■■■□□ 2.04
FOXA3-201ENST00000302177 TMTC2Q8N394 836 aa27.8■■■□□ 2.04
FOXA3-201ENST00000302177 MAGEB6Q8N7X4 407 aa27.8■■■□□ 2.04
FOXA3-201ENST00000302177 PHKBQ93100 1093 aa27.8■■■□□ 2.04
FOXA3-201ENST00000302177 NACAP1Q9BZK3 213 aa27.8■■■□□ 2.04
FOXA3-201ENST00000302177 MROH7-TTC4A0A0A0MT08 1334 aa27.79■■■□□ 2.04
FOXA3-201ENST00000302177 MYO5AQ9Y4I1 1855 aaKnown RBP27.79■■■□□ 2.04
FOXA3-201ENST00000302177 IFIT3O14879 490 aaKnown RBP27.79■■■□□ 2.04
FOXA3-201ENST00000302177 RASGRF1Q13972 1273 aa27.79■■■□□ 2.04
FOXA3-201ENST00000302177 XPO4Q9C0E2 1151 aaKnown RBP27.79■■■□□ 2.04
FOXA3-201ENST00000302177 SENP2Q9HC62 589 aa27.79■■■□□ 2.04
FOXA3-201ENST00000302177 RTL9Q8NET4 1388 aa27.79■■■□□ 2.04
FOXA3-201ENST00000302177 RANBP6O60518 1105 aaKnown RBP27.79■■■□□ 2.04
FOXA3-201ENST00000302177 MBD4O95243 580 aa27.79■■■□□ 2.04
FOXA3-201ENST00000302177 STAG1Q8WVM7 1258 aa27.79■■■□□ 2.04
FOXA3-201ENST00000302177 MPHOSPH8Q99549 860 aa27.79■■■□□ 2.04
FOXA3-201ENST00000302177 GSG1L2A8MUP6 293 aa27.78■■■□□ 2.04
FOXA3-201ENST00000302177 MFSD6Q6ZSS7 791 aa27.78■■■□□ 2.04
FOXA3-201ENST00000302177 GJD4Q96KN9 370 aaPredicted RBP27.78■■■□□ 2.04
FOXA3-201ENST00000302177 TUBB4AP04350 444 aa27.77■■■□□ 2.04
FOXA3-201ENST00000302177 PARP10Q53GL7 1025 aa27.77■■■□□ 2.04
FOXA3-201ENST00000302177 SMAP1Q8IYB5 467 aaPredicted RBP27.77■■■□□ 2.04
FOXA3-201ENST00000302177 HELBQ8NG08 1087 aaPredicted RBP27.77■■■□□ 2.04
FOXA3-201ENST00000302177 FBXW7Q969H0 707 aa27.77■■■□□ 2.04
FOXA3-201ENST00000302177 IFNKQ9P0W0 207 aa27.77■■■□□ 2.04
FOXA3-201ENST00000302177 FAM177BA6PVY3 158 aa27.77■■■□□ 2.04
FOXA3-201ENST00000302177 NRDCO43847 1150 aa27.77■■■□□ 2.04
FOXA3-201ENST00000302177 RXRAP19793 462 aa27.77■■■□□ 2.04
FOXA3-201ENST00000302177 SART3Q15020 963 aaKnown RBP27.77■■■□□ 2.04
FOXA3-201ENST00000302177 VPS72Q15906 364 aa27.77■■■□□ 2.04
FOXA3-201ENST00000302177 UTP14AQ9BVJ6 771 aaKnown RBP27.77■■■□□ 2.04
FOXA3-201ENST00000302177 SMC2O95347 1197 aa27.76■■■□□ 2.03
FOXA3-201ENST00000302177 SUSD4Q5VX71 490 aa27.76■■■□□ 2.03
FOXA3-201ENST00000302177 BIN1O00499 593 aa27.75■■■□□ 2.03
FOXA3-201ENST00000302177 CCDC196A0A1B0GTZ2 297 aa27.75■■■□□ 2.03
FOXA3-201ENST00000302177 PSDA5PKW4 1024 aaPredicted RBP27.75■■■□□ 2.03
FOXA3-201ENST00000302177 NCBP1Q09161 790 aaKnown RBP27.75■■■□□ 2.03
FOXA3-201ENST00000302177 SAFBQ15424 915 aaKnown RBP eCLIP27.75■■■□□ 2.03
FOXA3-201ENST00000302177 PPP4R3BQ5MIZ7 849 aa27.75■■■□□ 2.03
FOXA3-201ENST00000302177 NOSTRINQ8IVI9 506 aa27.75■■■□□ 2.03
FOXA3-201ENST00000302177 RNF41Q9H4P4 317 aaPredicted RBP27.75■■■□□ 2.03
FOXA3-201ENST00000302177 ARMT1Q9H993 441 aa27.75■■■□□ 2.03
FOXA3-201ENST00000302177 USP27XA6NNY8 438 aa27.74■■■□□ 2.03
FOXA3-201ENST00000302177 CTDSPL2Q05D32 466 aa27.74■■■□□ 2.03
FOXA3-201ENST00000302177 CCDC152Q4G0S7 254 aa27.74■■■□□ 2.03
FOXA3-201ENST00000302177 TRIM22Q8IYM9 498 aa27.74■■■□□ 2.03
FOXA3-201ENST00000302177 NOL10Q9BSC4 688 aaKnown RBP27.74■■■□□ 2.03
FOXA3-201ENST00000302177 SLC26A6Q9BXS9 759 aa27.74■■■□□ 2.03
FOXA3-201ENST00000302177 CBFA2T2O43439 604 aa27.73■■■□□ 2.03
FOXA3-201ENST00000302177 MMP1P03956 469 aa27.73■■■□□ 2.03
FOXA3-201ENST00000302177 KRI1Q8N9T8 703 aaKnown RBP27.73■■■□□ 2.03
FOXA3-201ENST00000302177 FOXP1Q9H334 677 aaPredicted RBP27.73■■■□□ 2.03
FOXA3-201ENST00000302177 HOOK1Q9UJC3 728 aaKnown RBP27.73■■■□□ 2.03
FOXA3-201ENST00000302177 SFPQP23246 707 aaKnown RBP eCLIP27.73■■■□□ 2.03
FOXA3-201ENST00000302177 FANCCQ00597 558 aa27.73■■■□□ 2.03
FOXA3-201ENST00000302177 MYL5Q02045 173 aa27.73■■■□□ 2.03
FOXA3-201ENST00000302177 PPP2R5BQ15173 497 aa27.73■■■□□ 2.03
FOXA3-201ENST00000302177 KRBA2Q6ZNG9 492 aa27.73■■■□□ 2.03
FOXA3-201ENST00000302177 CDCA7Q9BWT1 371 aaPredicted RBP27.73■■■□□ 2.03
FOXA3-201ENST00000302177 KCNH3Q9ULD8 1083 aa27.73■■■□□ 2.03
FOXA3-201ENST00000302177 IGHMBP2P38935 993 aaKnown RBP27.72■■■□□ 2.03
FOXA3-201ENST00000302177 RILPL1Q5EBL4 403 aa27.72■■■□□ 2.03
FOXA3-201ENST00000302177 INTS5Q6P9B9 1019 aaKnown RBP27.72■■■□□ 2.03
FOXA3-201ENST00000302177 TMC6Q7Z403 805 aa27.72■■■□□ 2.03
FOXA3-201ENST00000302177 KIF18AQ8NI77 898 aa27.72■■■□□ 2.03
FOXA3-201ENST00000302177 SYTL4Q96C24 671 aaPredicted RBP27.72■■■□□ 2.03
FOXA3-201ENST00000302177 CCDC87Q9NVE4 849 aa27.72■■■□□ 2.03
FOXA3-201ENST00000302177 ECM29Q5VYK3 1845 aa27.72■■■□□ 2.03
FOXA3-201ENST00000302177 ERICH2A1L162 156 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms