RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ANTXR2P58335 489 aa12.44□□□□□ -0.42
ZNF558-201ENST00000301475 IP6K1Q92551 441 aa12.44□□□□□ -0.42
ZNF558-201ENST00000301475 C5P01031 1676 aa12.44□□□□□ -0.42
ZNF558-201ENST00000301475 SIPA1L3O60292 1781 aaPredicted RBP12.44□□□□□ -0.42
ZNF558-201ENST00000301475 PRC1O43663 620 aa12.44□□□□□ -0.42
ZNF558-201ENST00000301475 NEXNQ0ZGT2 675 aa12.44□□□□□ -0.42
ZNF558-201ENST00000301475 NOM1Q5C9Z4 860 aaKnown RBP12.44□□□□□ -0.42
ZNF558-201ENST00000301475 UBE3BQ7Z3V4 1068 aa12.44□□□□□ -0.42
ZNF558-201ENST00000301475 XAGE3Q8WTP9 111 aa12.44□□□□□ -0.42
ZNF558-201ENST00000301475 CCDC102AQ96A19 550 aa12.44□□□□□ -0.42
ZNF558-201ENST00000301475 MAP3K14Q99558 947 aa12.44□□□□□ -0.42
ZNF558-201ENST00000301475 RAI14Q9P0K7 980 aa12.44□□□□□ -0.42
ZNF558-201ENST00000301475 LRRIQ3A6PVS8 624 aaPredicted RBP12.43□□□□□ -0.42
ZNF558-201ENST00000301475 CPLX1O14810 134 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 PPP6R2O75170 966 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 RABL6Q3YEC7 729 aaPredicted RBP12.43□□□□□ -0.42
ZNF558-201ENST00000301475 SPECC1Q5M775 1068 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 CEP112Q8N8E3 955 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 SAMSN1Q9NSI8 373 aaKnown RBP12.43□□□□□ -0.42
ZNF558-201ENST00000301475 MAN1B1Q9UKM7 699 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 ECM29Q5VYK3 1845 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 ERLIN1O75477 346 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 PRR29P0C7W0 189 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 GUCY2CP25092 1073 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 MB21D2Q8IYB1 491 aaPredicted RBP12.43□□□□□ -0.42
ZNF558-201ENST00000301475 FAM71BQ8TC56 605 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 OSBP2Q969R2 916 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 FAM204AQ9H8W3 233 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 TOMM22Q9NS69 142 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 GEMIN8Q9NWZ8 242 aaKnown RBP12.43□□□□□ -0.42
ZNF558-201ENST00000301475 KCNH3Q9ULD8 1083 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 AFDNP55196 1824 aaKnown RBP12.43□□□□□ -0.42
ZNF558-201ENST00000301475 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 ABL1P00519 1130 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 MDM2Q00987 491 aaPredicted RBP12.43□□□□□ -0.42
ZNF558-201ENST00000301475 ZNF569Q5MCW4 686 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 CCDC102BQ68D86 513 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 METTL22Q9BUU2 404 aaPredicted RBP12.43□□□□□ -0.42
ZNF558-201ENST00000301475 NFAT5O94916 1531 aa12.43□□□□□ -0.42
ZNF558-201ENST00000301475 TEX33O43247 280 aa12.42□□□□□ -0.42
ZNF558-201ENST00000301475 PLEKHO1Q53GL0 409 aaPredicted RBP12.42□□□□□ -0.42
ZNF558-201ENST00000301475 PAXIP1Q6ZW49 1069 aaPredicted RBP12.42□□□□□ -0.42
ZNF558-201ENST00000301475 COPS6Q7L5N1 327 aa12.42□□□□□ -0.42
ZNF558-201ENST00000301475 NOA1Q8NC60 698 aaKnown RBP12.42□□□□□ -0.42
ZNF558-201ENST00000301475 NEUROD6Q96NK8 337 aa12.42□□□□□ -0.42
ZNF558-201ENST00000301475 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
ZNF558-201ENST00000301475 KIF5CO60282 957 aa12.42□□□□□ -0.42
ZNF558-201ENST00000301475 TIMM10P62072 90 aa12.42□□□□□ -0.42
ZNF558-201ENST00000301475 NR1I3Q14994 352 aa12.42□□□□□ -0.42
ZNF558-201ENST00000301475 C1orf141Q5JVX7 400 aa12.42□□□□□ -0.42
ZNF558-201ENST00000301475 ARHGEF25Q86VW2 580 aa12.42□□□□□ -0.42
ZNF558-201ENST00000301475 ANKRD24Q8TF21 1146 aa12.42□□□□□ -0.42
ZNF558-201ENST00000301475 DRC1Q96MC2 740 aa12.42□□□□□ -0.42
ZNF558-201ENST00000301475 CDC5LQ99459 802 aaKnown RBP12.42□□□□□ -0.42
ZNF558-201ENST00000301475 AKR1B15C9JRZ8 316 aaPredicted RBP12.41□□□□□ -0.42
ZNF558-201ENST00000301475 PIP4K2AP48426 406 aaPredicted RBP12.41□□□□□ -0.42
ZNF558-201ENST00000301475 KIF4BQ2VIQ3 1234 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 KRT40Q6A162 431 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 APTXQ7Z2E3 356 aaKnown RBP12.41□□□□□ -0.42
ZNF558-201ENST00000301475 SLC35F6Q8N357 371 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 JMYQ8N9B5 988 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 ALG1Q9BT22 464 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 BRMS1Q9HCU9 246 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 MYH8P13535 1937 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 RNF113AO15541 343 aaKnown RBP12.41□□□□□ -0.42
ZNF558-201ENST00000301475 RXRAP19793 462 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 GRIN1Q05586 938 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 SLC39A6Q13433 755 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 GRAMD1CQ8IYS0 662 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 NKX2-3Q8TAU0 364 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 ENOX1Q8TC92 643 aaKnown RBP12.41□□□□□ -0.42
ZNF558-201ENST00000301475 PANX2Q96RD6 677 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 DENND2AQ9ULE3 1009 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 OVOS2A0A0G2JMS6 1433 aa12.41□□□□□ -0.42
ZNF558-201ENST00000301475 A0A1B0GTH6 734 aa12.4□□□□□ -0.42
ZNF558-201ENST00000301475 ATP2B1P20020 1258 aa12.4□□□□□ -0.42
ZNF558-201ENST00000301475 RBL2Q08999 1139 aa12.4□□□□□ -0.42
ZNF558-201ENST00000301475 HSP90B2PQ58FF3 399 aa12.4□□□□□ -0.42
ZNF558-201ENST00000301475 PPM1EQ8WY54 764 aa12.4□□□□□ -0.42
ZNF558-201ENST00000301475 SEC31BQ9NQW1 1179 aa12.4□□□□□ -0.42
ZNF558-201ENST00000301475 RNF40O75150 1001 aa12.4□□□□□ -0.42
ZNF558-201ENST00000301475 POSTNQ15063 836 aa12.4□□□□□ -0.42
ZNF558-201ENST00000301475 ATG9AQ7Z3C6 839 aa12.4□□□□□ -0.42
ZNF558-201ENST00000301475 ACRBPQ8NEB7 543 aa12.4□□□□□ -0.42
ZNF558-201ENST00000301475 CPLX3Q8WVH0 158 aa12.4□□□□□ -0.42
ZNF558-201ENST00000301475 LOC102724159A0A0B4J2E5 919 aa12.4□□□□□ -0.43
ZNF558-201ENST00000301475 CTAGE9A4FU28 777 aa12.4□□□□□ -0.43
ZNF558-201ENST00000301475 ATP5J2-PTCD1G3V325 749 aa12.4□□□□□ -0.43
ZNF558-201ENST00000301475 UBE2Q2LH0YL09 131 aa12.4□□□□□ -0.43
ZNF558-201ENST00000301475 PTCD1O75127 700 aaKnown RBP12.4□□□□□ -0.43
ZNF558-201ENST00000301475 SART3Q15020 963 aaKnown RBP12.4□□□□□ -0.43
ZNF558-201ENST00000301475 PWP2Q15269 919 aaKnown RBP12.4□□□□□ -0.43
ZNF558-201ENST00000301475 HSP90AB3PQ58FF7 597 aa12.4□□□□□ -0.43
ZNF558-201ENST00000301475 SLC9C2Q5TAH2 1124 aa12.4□□□□□ -0.43
ZNF558-201ENST00000301475 RASGRP2Q7LDG7 609 aa12.4□□□□□ -0.43
ZNF558-201ENST00000301475 NUTM2AQ8IVF1 878 aaPredicted RBP12.4□□□□□ -0.43
ZNF558-201ENST00000301475 PHKBQ93100 1093 aa12.4□□□□□ -0.43
ZNF558-201ENST00000301475 KDM4FA0A1W2PPD8 638 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 PPFIA4O75335 1185 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 SYF2O95926 243 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms