RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 C2CD5Q86YS7 1000 aa16.73■□□□□ 0.27
C9orf3-202ENST00000297979 MPNDQ8N594 471 aa16.73■□□□□ 0.27
C9orf3-202ENST00000297979 TMX4Q9H1E5 349 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-202ENST00000297979 TOMM22Q9NS69 142 aa16.73■□□□□ 0.27
C9orf3-202ENST00000297979 ATP8A2Q9NTI2 1148 aa16.73■□□□□ 0.27
C9orf3-202ENST00000297979 LAMB1P07942 1786 aa16.73■□□□□ 0.27
C9orf3-202ENST00000297979 DHX16O60231 1041 aaKnown RBP16.73■□□□□ 0.27
C9orf3-202ENST00000297979 RRP12Q5JTH9 1297 aaKnown RBP16.73■□□□□ 0.27
C9orf3-202ENST00000297979 IGDCC4Q8TDY8 1250 aa16.73■□□□□ 0.27
C9orf3-202ENST00000297979 ZNF622Q969S3 477 aaKnown RBP eCLIP16.73■□□□□ 0.27
C9orf3-202ENST00000297979 CHRM1P11229 460 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-202ENST00000297979 TMEM67Q5HYA8 995 aa16.72■□□□□ 0.27
C9orf3-202ENST00000297979 DPP8Q6V1X1 898 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-202ENST00000297979 GRIK5Q16478 980 aa16.72■□□□□ 0.27
C9orf3-202ENST00000297979 STYK1Q6J9G0 422 aa16.72■□□□□ 0.27
C9orf3-202ENST00000297979 CTR9Q6PD62 1173 aa16.72■□□□□ 0.27
C9orf3-202ENST00000297979 TBC1D22AQ8WUA7 517 aa16.72■□□□□ 0.27
C9orf3-202ENST00000297979 COA1Q9GZY4 146 aa16.72■□□□□ 0.27
C9orf3-202ENST00000297979 LY9Q9HBG7 655 aa16.72■□□□□ 0.27
C9orf3-202ENST00000297979 DCP1AQ9NPI6 582 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-202ENST00000297979 TCHHQ07283 1943 aa16.72■□□□□ 0.27
C9orf3-202ENST00000297979 H0YIN7 160 aa16.71■□□□□ 0.27
C9orf3-202ENST00000297979 IFIT3O14879 490 aaKnown RBP16.71■□□□□ 0.27
C9orf3-202ENST00000297979 LDHCP07864 332 aa16.71■□□□□ 0.27
C9orf3-202ENST00000297979 LIFRP42702 1097 aa16.71■□□□□ 0.27
C9orf3-202ENST00000297979 OLFM4Q6UX06 510 aa16.71■□□□□ 0.27
C9orf3-202ENST00000297979 SGMS1Q86VZ5 419 aa16.71■□□□□ 0.27
C9orf3-202ENST00000297979 STK11IPQ8N1F8 1099 aa16.71■□□□□ 0.27
C9orf3-202ENST00000297979 MTA3Q9BTC8 594 aa16.71■□□□□ 0.27
C9orf3-202ENST00000297979 PCP11498 1178 aaKnown RBP16.71■□□□□ 0.27
C9orf3-202ENST00000297979 SART3Q15020 963 aaKnown RBP16.71■□□□□ 0.27
C9orf3-202ENST00000297979 TMEM87AQ8NBN3 555 aa16.71■□□□□ 0.27
C9orf3-202ENST00000297979 NOL10Q9BSC4 688 aaKnown RBP16.71■□□□□ 0.27
C9orf3-202ENST00000297979 CNPY2Q9Y2B0 182 aa16.71■□□□□ 0.27
C9orf3-202ENST00000297979 MYH2Q9UKX2 1941 aa16.71■□□□□ 0.27
C9orf3-202ENST00000297979 H3BQV1 296 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 RIMBP2O15034 1052 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 BAG3O95817 575 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 DIXDC1Q155Q3 683 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 MFSD14BQ5SR56 506 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 IFFO2Q5TF58 517 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 APOA5Q6Q788 366 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 NFXL1Q6ZNB6 911 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 ZC3H12CQ9C0D7 883 aaKnown RBP16.7■□□□□ 0.26
C9orf3-202ENST00000297979 MROH7-TTC4A0A0A0MT08 1334 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 FAM205AQ6ZU69 1335 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 USP17L12C9JPN9 530 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 USP17L21D6R901 530 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 DEFB132Q7Z7B7 95 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 ESR2Q92731 530 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 GDPD2Q9HCC8 539 aa16.7■□□□□ 0.26
C9orf3-202ENST00000297979 ARPP21Q9UBL0 812 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-202ENST00000297979 CYP2D7A0A087X1C5 515 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 CPLX1O14810 134 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 METAP2P50579 478 aaKnown RBP eCLIP16.69■□□□□ 0.26
C9orf3-202ENST00000297979 FERMT3Q86UX7 667 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 RAB11FIP4Q86YS3 637 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 GPT2Q8TD30 523 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 SENP2Q9HC62 589 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 MBD3O95983 291 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 NCLP19338 710 aaKnown RBP16.69■□□□□ 0.26
C9orf3-202ENST00000297979 PPP4CP60510 307 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 USP48Q86UV5 1035 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 CERS3Q8IU89 383 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 ERICH2A1L162 156 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 SMIM22K7EJ46 135 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 ZBTB43O43298 467 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 DNM1Q05193 864 aaKnown RBP16.69■□□□□ 0.26
C9orf3-202ENST00000297979 SBK1Q52WX2 424 aa16.69■□□□□ 0.26
C9orf3-202ENST00000297979 CCDC69A6NI79 296 aa16.68■□□□□ 0.26
C9orf3-202ENST00000297979 FGRP09769 529 aa16.68■□□□□ 0.26
C9orf3-202ENST00000297979 SH3RF3Q8TEJ3 882 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-202ENST00000297979 EYA3Q99504 573 aa16.68■□□□□ 0.26
C9orf3-202ENST00000297979 RTFDC1Q9BY42 306 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-202ENST00000297979 KCNG1Q9UIX4 513 aa16.68■□□□□ 0.26
C9orf3-202ENST00000297979 USP5P45974 858 aa16.68■□□□□ 0.26
C9orf3-202ENST00000297979 GTF2IP78347 998 aa16.68■□□□□ 0.26
C9orf3-202ENST00000297979 WTAPQ15007 396 aa16.68■□□□□ 0.26
C9orf3-202ENST00000297979 CSPP1Q1MSJ5 1256 aa16.68■□□□□ 0.26
C9orf3-202ENST00000297979 MICU3Q86XE3 530 aa16.68■□□□□ 0.26
C9orf3-202ENST00000297979 SLF2Q8IX21 1173 aa16.68■□□□□ 0.26
C9orf3-202ENST00000297979 ZKSCAN3Q9BRR0 538 aa16.68■□□□□ 0.26
C9orf3-202ENST00000297979 UBAC1Q9BSL1 405 aa16.68■□□□□ 0.26
C9orf3-202ENST00000297979 SLC12A7Q9Y666 1083 aa16.68■□□□□ 0.26
C9orf3-202ENST00000297979 SLX4Q8IY92 1834 aa16.67■□□□□ 0.26
C9orf3-202ENST00000297979 SLC3A2P08195 630 aaKnown RBP16.67■□□□□ 0.26
C9orf3-202ENST00000297979 FDPSP14324 419 aaKnown RBP16.67■□□□□ 0.26
C9orf3-202ENST00000297979 CNKSR1Q969H4 720 aa16.67■□□□□ 0.26
C9orf3-202ENST00000297979 NAV1Q8NEY1 1877 aa16.67■□□□□ 0.26
C9orf3-202ENST00000297979 FIBPO43427 364 aa16.67■□□□□ 0.26
C9orf3-202ENST00000297979 PPFIA3O75145 1194 aa16.67■□□□□ 0.26
C9orf3-202ENST00000297979 SYNE3Q6ZMZ3 975 aa16.67■□□□□ 0.26
C9orf3-202ENST00000297979 TMTC2Q8N394 836 aa16.67■□□□□ 0.26
C9orf3-202ENST00000297979 GOLGA8AA7E2F4 631 aa16.66■□□□□ 0.26
C9orf3-202ENST00000297979 CDKL5O76039 1030 aa16.66■□□□□ 0.26
C9orf3-202ENST00000297979 CHRNA5P30532 468 aa16.66■□□□□ 0.26
C9orf3-202ENST00000297979 BTDP43251 543 aa16.66■□□□□ 0.26
C9orf3-202ENST00000297979 CAVIN1Q6NZI2 390 aaKnown RBP16.66■□□□□ 0.26
C9orf3-202ENST00000297979 ZSCAN16Q9H4T2 348 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-202ENST00000297979 MCM9Q9NXL9 1143 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms