RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 UBE2Q2LH0YL09 131 aa28.35■■■□□ 2.13
SHISA5-201ENST00000296444 STAG1Q8WVM7 1258 aa28.35■■■□□ 2.13
SHISA5-201ENST00000296444 WDR33Q9C0J8 1336 aaKnown RBP28.35■■■□□ 2.13
SHISA5-201ENST00000296444 FDPSP14324 419 aaKnown RBP28.34■■■□□ 2.13
SHISA5-201ENST00000296444 HSP90AA2PQ14568 343 aaPredicted RBP28.34■■■□□ 2.13
SHISA5-201ENST00000296444 FBXL16Q8N461 479 aa28.34■■■□□ 2.13
SHISA5-201ENST00000296444 C7orf43Q8WVR3 580 aa28.34■■■□□ 2.13
SHISA5-201ENST00000296444 ZNF274Q96GC6 653 aaPredicted RBP28.34■■■□□ 2.13
SHISA5-201ENST00000296444 LY9Q9HBG7 655 aa28.34■■■□□ 2.13
SHISA5-201ENST00000296444 ADD1P35611 737 aaKnown RBP28.33■■■□□ 2.13
SHISA5-201ENST00000296444 RTFDC1Q9BY42 306 aaPredicted RBP28.33■■■□□ 2.13
SHISA5-201ENST00000296444 PTPDC1A2A3K4 754 aa28.33■■■□□ 2.13
SHISA5-201ENST00000296444 GOLGA8BA8MQT2 603 aa28.33■■■□□ 2.13
SHISA5-201ENST00000296444 F13A1P00488 732 aa28.33■■■□□ 2.13
SHISA5-201ENST00000296444 GRPEL1Q9HAV7 217 aa28.33■■■□□ 2.13
SHISA5-201ENST00000296444 CNPY2Q9Y2B0 182 aa28.33■■■□□ 2.13
SHISA5-201ENST00000296444 CCDC88AQ3V6T2 1871 aa28.32■■■□□ 2.12
SHISA5-201ENST00000296444 SPTY2D1Q68D10 685 aaPredicted RBP28.32■■■□□ 2.12
SHISA5-201ENST00000296444 SMARCC2Q8TAQ2 1214 aa28.32■■■□□ 2.12
SHISA5-201ENST00000296444 MKRN1Q9UHC7 482 aaKnown RBP28.32■■■□□ 2.12
SHISA5-201ENST00000296444 TAOK2Q9UL54 1235 aa28.32■■■□□ 2.12
SHISA5-201ENST00000296444 ANGEL1Q9UNK9 670 aaKnown RBP28.32■■■□□ 2.12
SHISA5-201ENST00000296444 C21orf2O43822 256 aa28.32■■■□□ 2.12
SHISA5-201ENST00000296444 TGFBRAP1Q8WUH2 860 aa28.32■■■□□ 2.12
SHISA5-201ENST00000296444 ATF5Q9Y2D1 282 aaPredicted RBP28.32■■■□□ 2.12
SHISA5-201ENST00000296444 PCDHAC2Q9Y5I4 1007 aa28.32■■■□□ 2.12
SHISA5-201ENST00000296444 CDC27P30260 824 aa28.31■■■□□ 2.12
SHISA5-201ENST00000296444 DYNLL2Q96FJ2 89 aa28.31■■■□□ 2.12
SHISA5-201ENST00000296444 PKNOX2Q96KN3 472 aa28.31■■■□□ 2.12
SHISA5-201ENST00000296444 MYH2Q9UKX2 1941 aa28.31■■■□□ 2.12
SHISA5-201ENST00000296444 NMT2O60551 498 aa28.31■■■□□ 2.12
SHISA5-201ENST00000296444 GADD45BO75293 160 aaPredicted RBP28.31■■■□□ 2.12
SHISA5-201ENST00000296444 OTUD7BQ6GQQ9 843 aa28.31■■■□□ 2.12
SHISA5-201ENST00000296444 TMC4Q7Z404 712 aa28.31■■■□□ 2.12
SHISA5-201ENST00000296444 KCNA3P22001 575 aa28.3■■■□□ 2.12
SHISA5-201ENST00000296444 GUCY1B3Q02153 619 aa28.3■■■□□ 2.12
SHISA5-201ENST00000296444 TMEM67Q5HYA8 995 aa28.3■■■□□ 2.12
SHISA5-201ENST00000296444 GPT2Q8TD30 523 aa28.3■■■□□ 2.12
SHISA5-201ENST00000296444 IFIT3O14879 490 aaKnown RBP28.3■■■□□ 2.12
SHISA5-201ENST00000296444 PTMSP20962 102 aa28.3■■■□□ 2.12
SHISA5-201ENST00000296444 BTDP43251 543 aa28.3■■■□□ 2.12
SHISA5-201ENST00000296444 SCNN1DP51172 638 aa28.3■■■□□ 2.12
SHISA5-201ENST00000296444 DNM1Q05193 864 aaKnown RBP28.3■■■□□ 2.12
SHISA5-201ENST00000296444 STYK1Q6J9G0 422 aa28.3■■■□□ 2.12
SHISA5-201ENST00000296444 MAPKAPK5Q8IW41 473 aa28.3■■■□□ 2.12
SHISA5-201ENST00000296444 CRNKL1Q9BZJ0 848 aaKnown RBP28.3■■■□□ 2.12
SHISA5-201ENST00000296444 SAP30BPQ9UHR5 308 aaKnown RBP28.3■■■□□ 2.12
SHISA5-201ENST00000296444 MICU3Q86XE3 530 aa28.29■■■□□ 2.12
SHISA5-201ENST00000296444 FAM217BQ9NTX9 383 aaPredicted RBP28.29■■■□□ 2.12
SHISA5-201ENST00000296444 MCM9Q9NXL9 1143 aa28.29■■■□□ 2.12
SHISA5-201ENST00000296444 FAM47AQ5JRC9 791 aa28.29■■■□□ 2.12
SHISA5-201ENST00000296444 APOA5Q6Q788 366 aa28.29■■■□□ 2.12
SHISA5-201ENST00000296444 COA1Q9GZY4 146 aa28.29■■■□□ 2.12
SHISA5-201ENST00000296444 ANAPC4Q9UJX5 808 aa28.29■■■□□ 2.12
SHISA5-201ENST00000296444 MROH7-TTC4A0A0A0MT08 1334 aa28.28■■■□□ 2.12
SHISA5-201ENST00000296444 ESPNB1AK53 854 aa28.28■■■□□ 2.12
SHISA5-201ENST00000296444 PLCD1P51178 756 aa28.28■■■□□ 2.12
SHISA5-201ENST00000296444 AIFM3Q96NN9 605 aa28.28■■■□□ 2.12
SHISA5-201ENST00000296444 ZBTB22O15209 634 aa28.28■■■□□ 2.12
SHISA5-201ENST00000296444 CMTR1Q8N1G2 835 aaKnown RBP28.28■■■□□ 2.12
SHISA5-201ENST00000296444 AOC3Q16853 763 aa28.27■■■□□ 2.12
SHISA5-201ENST00000296444 SLC44A5Q8NCS7 719 aa28.27■■■□□ 2.12
SHISA5-201ENST00000296444 FAM205AQ6ZU69 1335 aa28.27■■■□□ 2.12
SHISA5-201ENST00000296444 DPEP1P16444 411 aa28.26■■■□□ 2.12
SHISA5-201ENST00000296444 USP48Q86UV5 1035 aa28.26■■■□□ 2.12
SHISA5-201ENST00000296444 TIAM2Q8IVF5 1701 aa28.26■■■□□ 2.11
SHISA5-201ENST00000296444 RANBP6O60518 1105 aaKnown RBP28.26■■■□□ 2.11
SHISA5-201ENST00000296444 RHBDL3P58872 404 aa28.26■■■□□ 2.11
SHISA5-201ENST00000296444 RBM27Q9P2N5 1060 aaKnown RBP28.26■■■□□ 2.11
SHISA5-201ENST00000296444 SLURP2P0DP57 97 aa28.25■■■□□ 2.11
SHISA5-201ENST00000296444 PHKBQ93100 1093 aa28.25■■■□□ 2.11
SHISA5-201ENST00000296444 DDX49Q9Y6V7 483 aaKnown RBP28.25■■■□□ 2.11
SHISA5-201ENST00000296444 SCN9AQ15858 1988 aa28.25■■■□□ 2.11
SHISA5-201ENST00000296444 USP5P45974 858 aa28.25■■■□□ 2.11
SHISA5-201ENST00000296444 NFXL1Q6ZNB6 911 aa28.25■■■□□ 2.11
SHISA5-201ENST00000296444 KRT23Q9C075 422 aa28.25■■■□□ 2.11
SHISA5-201ENST00000296444 ATP8A2Q9NTI2 1148 aa28.24■■■□□ 2.11
SHISA5-201ENST00000296444 DAGLAQ9Y4D2 1042 aa28.24■■■□□ 2.11
SHISA5-201ENST00000296444 WDR19Q8NEZ3 1342 aa28.24■■■□□ 2.11
SHISA5-201ENST00000296444 NCLP19338 710 aaKnown RBP28.24■■■□□ 2.11
SHISA5-201ENST00000296444 CHMP4CQ96CF2 233 aa28.24■■■□□ 2.11
SHISA5-201ENST00000296444 GPR75-ASB3A0A0A6YYF3 556 aa28.23■■■□□ 2.11
SHISA5-201ENST00000296444 PPP4CP60510 307 aa28.23■■■□□ 2.11
SHISA5-201ENST00000296444 SKOR2Q2VWA4 1001 aaPredicted RBP28.23■■■□□ 2.11
SHISA5-201ENST00000296444 CCDC82Q8N4S0 544 aa28.23■■■□□ 2.11
SHISA5-201ENST00000296444 CNNM2Q9H8M5 875 aa28.23■■■□□ 2.11
SHISA5-201ENST00000296444 TMEM87BQ96K49 555 aa28.23■■■□□ 2.11
SHISA5-201ENST00000296444 TFIP11Q9UBB9 837 aaKnown RBP28.23■■■□□ 2.11
SHISA5-201ENST00000296444 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.23■■■□□ 2.11
SHISA5-201ENST00000296444 MAST2Q6P0Q8 1798 aa28.22■■■□□ 2.11
SHISA5-201ENST00000296444 ADAMTSL1Q8N6G6 1762 aa28.22■■■□□ 2.11
SHISA5-201ENST00000296444 SEC23AQ15436 765 aa28.22■■■□□ 2.11
SHISA5-201ENST00000296444 CNKSR1Q969H4 720 aa28.22■■■□□ 2.11
SHISA5-201ENST00000296444 TTF2Q9UNY4 1162 aaKnown RBP28.22■■■□□ 2.11
SHISA5-201ENST00000296444 SNED1Q8TER0 1413 aa28.22■■■□□ 2.11
SHISA5-201ENST00000296444 FIBPO43427 364 aa28.22■■■□□ 2.11
SHISA5-201ENST00000296444 GIMAP6Q6P9H5 292 aa28.22■■■□□ 2.11
SHISA5-201ENST00000296444 SGMS1Q86VZ5 419 aa28.22■■■□□ 2.11
SHISA5-201ENST00000296444 ENAHQ8N8S7 591 aaPredicted RBP28.22■■■□□ 2.11
SHISA5-201ENST00000296444 FAM184AQ8NB25 1140 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms