RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 KINO60870 393 aaKnown RBP15.36■□□□□ 0.05
RUBCN-202ENST00000296343 NR5A1Q13285 461 aa15.36■□□□□ 0.05
RUBCN-202ENST00000296343 ARID3AQ99856 593 aa15.36■□□□□ 0.05
RUBCN-202ENST00000296343 QTRT2Q9H974 415 aaKnown RBP15.36■□□□□ 0.05
RUBCN-202ENST00000296343 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.36■□□□□ 0.05
RUBCN-202ENST00000296343 ZNF165P49910 485 aa15.36■□□□□ 0.05
RUBCN-202ENST00000296343 PTPN21Q16825 1174 aa15.36■□□□□ 0.05
RUBCN-202ENST00000296343 SAP30BPQ9UHR5 308 aaKnown RBP15.36■□□□□ 0.05
RUBCN-202ENST00000296343 RIMBP2O15034 1052 aa15.35■□□□□ 0.05
RUBCN-202ENST00000296343 DZIP1Q86YF9 867 aaKnown RBP15.35■□□□□ 0.05
RUBCN-202ENST00000296343 FNBP4Q8N3X1 1017 aaPredicted RBP15.35■□□□□ 0.05
RUBCN-202ENST00000296343 CBX8Q9HC52 389 aa15.35■□□□□ 0.05
RUBCN-202ENST00000296343 ZNF804BA4D1E1 1349 aa15.35■□□□□ 0.05
RUBCN-202ENST00000296343 LAMA4Q16363 1823 aa15.35■□□□□ 0.05
RUBCN-202ENST00000296343 SPEF2Q9C093 1822 aa15.35■□□□□ 0.05
RUBCN-202ENST00000296343 MYSM1Q5VVJ2 828 aa15.35■□□□□ 0.05
RUBCN-202ENST00000296343 MSL1Q68DK7 614 aa15.35■□□□□ 0.05
RUBCN-202ENST00000296343 C11orf57Q6ZUT1 292 aaPredicted RBP15.35■□□□□ 0.05
RUBCN-202ENST00000296343 PDLIM2Q96JY6 352 aa15.35■□□□□ 0.05
RUBCN-202ENST00000296343 ZNF512BQ96KM6 892 aaPredicted RBP15.35■□□□□ 0.05
RUBCN-202ENST00000296343 ZNF396Q96N95 335 aaPredicted RBP15.35■□□□□ 0.05
RUBCN-202ENST00000296343 FUCA2Q9BTY2 467 aa15.35■□□□□ 0.05
RUBCN-202ENST00000296343 TRIM5Q9C035 493 aa15.35■□□□□ 0.05
RUBCN-202ENST00000296343 FAM217BQ9NTX9 383 aaPredicted RBP15.35■□□□□ 0.05
RUBCN-202ENST00000296343 R3HCC1Q9Y3T6 440 aaKnown RBP15.35■□□□□ 0.05
RUBCN-202ENST00000296343 TNKSO95271 1327 aa15.35■□□□□ 0.05
RUBCN-202ENST00000296343 COL1A1P02452 1464 aaPredicted RBP15.35■□□□□ 0.05
RUBCN-202ENST00000296343 USP17L8P0C7I0 530 aa15.34■□□□□ 0.05
RUBCN-202ENST00000296343 TRIM29Q14134 588 aa15.34■□□□□ 0.05
RUBCN-202ENST00000296343 SF3B3Q15393 1217 aaKnown RBP15.34■□□□□ 0.05
RUBCN-202ENST00000296343 PDILTQ8N807 584 aa15.34■□□□□ 0.05
RUBCN-202ENST00000296343 DYNLL2Q96FJ2 89 aa15.34■□□□□ 0.05
RUBCN-202ENST00000296343 MCM9Q9NXL9 1143 aa15.34■□□□□ 0.05
RUBCN-202ENST00000296343 NRBP1Q9UHY1 535 aa15.34■□□□□ 0.05
RUBCN-202ENST00000296343 CPLX2Q6PUV4 134 aaKnown RBP15.34■□□□□ 0.05
RUBCN-202ENST00000296343 NWD2Q9ULI1 1742 aa15.34■□□□□ 0.05
RUBCN-202ENST00000296343 FAM205CA6NFA0 338 aa15.33■□□□□ 0.05
RUBCN-202ENST00000296343 KIF23Q02241 960 aaPredicted RBP15.33■□□□□ 0.05
RUBCN-202ENST00000296343 SLC44A5Q8NCS7 719 aa15.33■□□□□ 0.05
RUBCN-202ENST00000296343 CLSTN2Q9H4D0 955 aa15.33■□□□□ 0.05
RUBCN-202ENST00000296343 VPS54Q9P1Q0 977 aa15.33■□□□□ 0.05
RUBCN-202ENST00000296343 MYH3P11055 1940 aa15.33■□□□□ 0.05
RUBCN-202ENST00000296343 ELP1O95163 1332 aa15.33■□□□□ 0.04
RUBCN-202ENST00000296343 ZMYM6O95789 1325 aa15.33■□□□□ 0.04
RUBCN-202ENST00000296343 SPTLC2O15270 562 aa15.33■□□□□ 0.04
RUBCN-202ENST00000296343 UBE4AQ14139 1066 aa15.33■□□□□ 0.04
RUBCN-202ENST00000296343 SART3Q15020 963 aaKnown RBP15.33■□□□□ 0.04
RUBCN-202ENST00000296343 RTN1Q16799 776 aa15.33■□□□□ 0.04
RUBCN-202ENST00000296343 OXER1Q8TDS5 423 aa15.33■□□□□ 0.04
RUBCN-202ENST00000296343 WDHD1O75717 1129 aaPredicted RBP15.33■□□□□ 0.04
RUBCN-202ENST00000296343 LETM1O95202 739 aaPredicted RBP15.33■□□□□ 0.04
RUBCN-202ENST00000296343 SSRP1Q08945 709 aaKnown RBP15.33■□□□□ 0.04
RUBCN-202ENST00000296343 RASGRP2Q7LDG7 609 aa15.33■□□□□ 0.04
RUBCN-202ENST00000296343 LINC00301Q8NCQ3 95 aa15.32■□□□□ 0.04
RUBCN-202ENST00000296343 RPGRQ92834 1020 aaKnown RBP15.32■□□□□ 0.04
RUBCN-202ENST00000296343 RIOK1Q9BRS2 568 aaKnown RBP15.32■□□□□ 0.04
RUBCN-202ENST00000296343 NYXQ9GZU5 481 aa15.32■□□□□ 0.04
RUBCN-202ENST00000296343 RCOR1Q9UKL0 485 aa15.32■□□□□ 0.04
RUBCN-202ENST00000296343 C6orf229H3BNL8 230 aa15.32■□□□□ 0.04
RUBCN-202ENST00000296343 PLEKHA8P1O95397 391 aa15.32■□□□□ 0.04
RUBCN-202ENST00000296343 VEGFAP15692 232 aaPredicted RBP15.32■□□□□ 0.04
RUBCN-202ENST00000296343 GRIN1Q05586 938 aa15.32■□□□□ 0.04
RUBCN-202ENST00000296343 SNW1Q13573 536 aaKnown RBP15.32■□□□□ 0.04
RUBCN-202ENST00000296343 NSUN4Q96CB9 384 aaKnown RBP15.32■□□□□ 0.04
RUBCN-202ENST00000296343 CPVLQ9H3G5 476 aa15.32■□□□□ 0.04
RUBCN-202ENST00000296343 NOM1Q5C9Z4 860 aaKnown RBP15.31■□□□□ 0.04
RUBCN-202ENST00000296343 ZNF654Q8IZM8 581 aa15.31■□□□□ 0.04
RUBCN-202ENST00000296343 FAM200AQ8TCP9 573 aa15.31■□□□□ 0.04
RUBCN-202ENST00000296343 DDX19AQ9NUU7 478 aaKnown RBP15.31■□□□□ 0.04
RUBCN-202ENST00000296343 V9GY48 417 aaPredicted RBP15.31■□□□□ 0.04
RUBCN-202ENST00000296343 UFL1O94874 794 aa15.31■□□□□ 0.04
RUBCN-202ENST00000296343 TM4SF1P30408 202 aa15.31■□□□□ 0.04
RUBCN-202ENST00000296343 CTR9Q6PD62 1173 aa15.31■□□□□ 0.04
RUBCN-202ENST00000296343 KRT23Q9C075 422 aa15.31■□□□□ 0.04
RUBCN-202ENST00000296343 BECN2A8MW95 431 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 SLURP2P0DP57 97 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 USP5P45974 858 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 LRMPQ12912 555 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 ZRSR1Q15695 479 aaKnown RBP15.3■□□□□ 0.04
RUBCN-202ENST00000296343 NTRK3Q16288 839 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 IFIT1BQ5T764 474 aaKnown RBP15.3■□□□□ 0.04
RUBCN-202ENST00000296343 ANO1Q5XXA6 986 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 POTEAQ6S8J7 498 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 MAPKAPK5Q8IW41 473 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 ENAHQ8N8S7 591 aaPredicted RBP15.3■□□□□ 0.04
RUBCN-202ENST00000296343 TGFBRAP1Q8WUH2 860 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 TMEM87BQ96K49 555 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 MXD3Q9BW11 206 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 CCDC39Q9UFE4 941 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 NOL7Q9UMY1 257 aaKnown RBP15.3■□□□□ 0.04
RUBCN-202ENST00000296343 ZKSCAN5Q9Y2L8 839 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 CNTNAP4Q9C0A0 1308 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 PTGS1P23219 599 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 PRR5LQ6MZQ0 368 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 DIS3L2Q8IYB7 885 aaKnown RBP15.3■□□□□ 0.04
RUBCN-202ENST00000296343 MRPS27Q92552 414 aaKnown RBP15.3■□□□□ 0.04
RUBCN-202ENST00000296343 CABP5Q9NP86 173 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 TSPY2A6NKD2 308 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 FANCBQ8NB91 859 aa15.3■□□□□ 0.04
RUBCN-202ENST00000296343 ESR2Q92731 530 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms