RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 DDX11Q96FC9 970 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 TMEM87BQ96K49 555 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 ATP8A2Q9NTI2 1148 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 SUGT1Q9Y2Z0 365 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 SH2B2O14492 632 aaPredicted RBP10.73□□□□□ -0.69
PDPN-201ENST00000294489 GADD45BO75293 160 aaPredicted RBP10.73□□□□□ -0.69
PDPN-201ENST00000294489 CTDNEP1O95476 244 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 LDHBP07195 334 aaKnown RBP10.73□□□□□ -0.69
PDPN-201ENST00000294489 FERMT3Q86UX7 667 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 CERS3Q8IU89 383 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 NSUN7Q8NE18 718 aaKnown RBP10.73□□□□□ -0.69
PDPN-201ENST00000294489 TBC1D22AQ8WUA7 517 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 KRT23Q9C075 422 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 HPS5Q9UPZ3 1129 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 TCHHQ07283 1943 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 PTPDC1A2A3K4 754 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 PPARAQ07869 468 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 CHAF1AQ13111 956 aaPredicted RBP10.73□□□□□ -0.69
PDPN-201ENST00000294489 GRIK5Q16478 980 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 SGMS1Q86VZ5 419 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 MPNDQ8N594 471 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 ROBO3Q96MS0 1386 aa10.73□□□□□ -0.69
PDPN-201ENST00000294489 H0YIN7 160 aa10.72□□□□□ -0.69
PDPN-201ENST00000294489 NT5C2P49902 561 aa10.72□□□□□ -0.69
PDPN-201ENST00000294489 SF3B2Q13435 895 aaKnown RBP10.72□□□□□ -0.69
PDPN-201ENST00000294489 ZSCAN16Q9H4T2 348 aaPredicted RBP10.72□□□□□ -0.69
PDPN-201ENST00000294489 GAKO14976 1311 aa10.72□□□□□ -0.69
PDPN-201ENST00000294489 LIFRP42702 1097 aa10.72□□□□□ -0.69
PDPN-201ENST00000294489 CTDSPL2Q05D32 466 aa10.72□□□□□ -0.69
PDPN-201ENST00000294489 CTR9Q6PD62 1173 aa10.72□□□□□ -0.69
PDPN-201ENST00000294489 ANP32BQ92688 251 aaKnown RBP10.72□□□□□ -0.69
PDPN-201ENST00000294489 SCAND2PQ9GZW5 306 aaPredicted RBP10.72□□□□□ -0.69
PDPN-201ENST00000294489 MROH7-TTC4A0A0A0MT08 1334 aa10.72□□□□□ -0.69
PDPN-201ENST00000294489 SCN9AQ15858 1988 aa10.72□□□□□ -0.69
PDPN-201ENST00000294489 MYH1P12882 1939 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 KLF18A0A0U1RQI7 1052 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 SYCE3A1L190 88 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 TDO2P48775 406 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 LRSAM1Q6UWE0 723 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 DEFB132Q7Z7B7 95 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 SDR42E1Q8WUS8 393 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 CNKSR1Q969H4 720 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 PANK2Q9BZ23 570 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 CRNKL1Q9BZJ0 848 aaKnown RBP10.71□□□□□ -0.69
PDPN-201ENST00000294489 RNF41Q9H4P4 317 aaPredicted RBP10.71□□□□□ -0.69
PDPN-201ENST00000294489 LY9Q9HBG7 655 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 DCP1AQ9NPI6 582 aaPredicted RBP10.71□□□□□ -0.69
PDPN-201ENST00000294489 ANGEL1Q9UNK9 670 aaKnown RBP10.71□□□□□ -0.69
PDPN-201ENST00000294489 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.71□□□□□ -0.69
PDPN-201ENST00000294489 GPR75-ASB3A0A0A6YYF3 556 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 GOLGA8BA8MQT2 603 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 FKBP1AP62942 108 aaKnown RBP10.71□□□□□ -0.69
PDPN-201ENST00000294489 MFSD6Q6ZSS7 791 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 DZIP1Q86YF9 867 aaKnown RBP10.71□□□□□ -0.69
PDPN-201ENST00000294489 NCOA5Q9HCD5 579 aaKnown RBP10.71□□□□□ -0.69
PDPN-201ENST00000294489 GPHNQ9NQX3 736 aaPredicted RBP10.71□□□□□ -0.69
PDPN-201ENST00000294489 ZSWIM5Q9P217 1185 aa10.71□□□□□ -0.69
PDPN-201ENST00000294489 ADAMTSL1Q8N6G6 1762 aa10.71□□□□□ -0.7
PDPN-201ENST00000294489 B4E1Z4 1266 aa10.71□□□□□ -0.7
PDPN-201ENST00000294489 LDHCP07864 332 aa10.71□□□□□ -0.7
PDPN-201ENST00000294489 NASPP49321 788 aaPredicted RBP10.71□□□□□ -0.7
PDPN-201ENST00000294489 DPP8Q6V1X1 898 aaPredicted RBP10.71□□□□□ -0.7
PDPN-201ENST00000294489 ELP1O95163 1332 aa10.7□□□□□ -0.7
PDPN-201ENST00000294489 C6orf229H3BNL8 230 aa10.7□□□□□ -0.7
PDPN-201ENST00000294489 CPLX1O14810 134 aa10.7□□□□□ -0.7
PDPN-201ENST00000294489 ORC4O43929 436 aa10.7□□□□□ -0.7
PDPN-201ENST00000294489 LETM1O95202 739 aaPredicted RBP10.7□□□□□ -0.7
PDPN-201ENST00000294489 RCAN1P53805 252 aa10.7□□□□□ -0.7
PDPN-201ENST00000294489 GRIPAP1Q4V328 841 aa10.7□□□□□ -0.7
PDPN-201ENST00000294489 UBE2Q2Q8WVN8 375 aa10.7□□□□□ -0.7
PDPN-201ENST00000294489 PDGFDQ9GZP0 370 aaPredicted RBP10.7□□□□□ -0.7
PDPN-201ENST00000294489 AATFQ9NY61 560 aaKnown RBP eCLIP10.7□□□□□ -0.7
PDPN-201ENST00000294489 CCDC183Q5T5S1 534 aa10.7□□□□□ -0.7
PDPN-201ENST00000294489 CC2D2BQ6DHV5 1058 aa10.7□□□□□ -0.7
PDPN-201ENST00000294489 OLFM4Q6UX06 510 aa10.7□□□□□ -0.7
PDPN-201ENST00000294489 EYA3Q99504 573 aa10.7□□□□□ -0.7
PDPN-201ENST00000294489 INCENPQ9NQS7 918 aa10.7□□□□□ -0.7
PDPN-201ENST00000294489 ARPP21Q9UBL0 812 aaPredicted RBP10.7□□□□□ -0.7
PDPN-201ENST00000294489 GOLGA6L4A6NEF3 574 aa10.69□□□□□ -0.7
PDPN-201ENST00000294489 RESTQ13127 1097 aa10.69□□□□□ -0.7
PDPN-201ENST00000294489 FAM173BQ6P4H8 233 aa10.69□□□□□ -0.7
PDPN-201ENST00000294489 SPATA32Q96LK8 384 aa10.69□□□□□ -0.7
PDPN-201ENST00000294489 CFAP45Q9UL16 551 aa10.69□□□□□ -0.7
PDPN-201ENST00000294489 BAG3O95817 575 aa10.69□□□□□ -0.7
PDPN-201ENST00000294489 KCNA3P22001 575 aa10.69□□□□□ -0.7
PDPN-201ENST00000294489 SEC23AQ15436 765 aa10.69□□□□□ -0.7
PDPN-201ENST00000294489 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
PDPN-201ENST00000294489 CPLX2Q6PUV4 134 aaKnown RBP10.69□□□□□ -0.7
PDPN-201ENST00000294489 SLF2Q8IX21 1173 aa10.69□□□□□ -0.7
PDPN-201ENST00000294489 MRIQ9BWK5 157 aa10.69□□□□□ -0.7
PDPN-201ENST00000294489 ZC3H12CQ9C0D7 883 aaKnown RBP10.69□□□□□ -0.7
PDPN-201ENST00000294489 JAG2Q9Y219 1238 aa10.69□□□□□ -0.7
PDPN-201ENST00000294489 KDM4AO75164 1064 aa10.68□□□□□ -0.7
PDPN-201ENST00000294489 CHRNA5P30532 468 aa10.68□□□□□ -0.7
PDPN-201ENST00000294489 MFSD14BQ5SR56 506 aa10.68□□□□□ -0.7
PDPN-201ENST00000294489 APOA5Q6Q788 366 aa10.68□□□□□ -0.7
PDPN-201ENST00000294489 TTC6Q86TZ1 520 aa10.68□□□□□ -0.7
PDPN-201ENST00000294489 SH3RF3Q8TEJ3 882 aaPredicted RBP10.68□□□□□ -0.7
PDPN-201ENST00000294489 ZNF622Q969S3 477 aaKnown RBP eCLIP10.68□□□□□ -0.7
PDPN-201ENST00000294489 FER1L6Q2WGJ9 1857 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms