RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 UQCRFS1P1P0C7P4 283 aa13.86□□□□□ -0.19
SLX4-201ENST00000294008 RAD51AP2Q09MP3 1159 aa13.86□□□□□ -0.19
SLX4-201ENST00000294008 MGARPQ8TDB4 240 aa13.86□□□□□ -0.19
SLX4-201ENST00000294008 POLIQ9UNA4 740 aa13.86□□□□□ -0.19
SLX4-201ENST00000294008 I3L4J1 428 aa13.86□□□□□ -0.19
SLX4-201ENST00000294008 GIMAP6Q6P9H5 292 aa13.86□□□□□ -0.19
SLX4-201ENST00000294008 PNMA2Q9UL42 364 aa13.86□□□□□ -0.19
SLX4-201ENST00000294008 ANGPTL3Q9Y5C1 460 aa13.86□□□□□ -0.19
SLX4-201ENST00000294008 ZNF165P49910 485 aa13.86□□□□□ -0.19
SLX4-201ENST00000294008 IGBP1P78318 339 aa13.86□□□□□ -0.19
SLX4-201ENST00000294008 KRT81Q14533 505 aa13.86□□□□□ -0.19
SLX4-201ENST00000294008 ZNF654Q8IZM8 581 aa13.86□□□□□ -0.19
SLX4-201ENST00000294008 TRPC6Q9Y210 931 aa13.86□□□□□ -0.19
SLX4-201ENST00000294008 NSMFQ6X4W1 530 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 TBC1D8O95759 1140 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 NVLO15381 856 aaKnown RBP13.85□□□□□ -0.19
SLX4-201ENST00000294008 LDHBP07195 334 aaKnown RBP13.85□□□□□ -0.19
SLX4-201ENST00000294008 ABI1Q8IZP0 508 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 PPP4R1Q8TF05 950 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 EYA3Q99504 573 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 NUB1Q9Y5A7 615 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 TRAF5O00463 557 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 S100BP04271 92 aaPredicted RBP13.85□□□□□ -0.19
SLX4-201ENST00000294008 NPR1P16066 1061 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 HHATQ5VTY9 493 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 C1orf228Q6PIY5 440 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 PALM2Q8IXS6 379 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 GLG1Q92896 1179 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 ZNF644Q9H582 1327 aaPredicted RBP13.85□□□□□ -0.19
SLX4-201ENST00000294008 ZNF653Q96CK0 615 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 PLEKHA4Q9H4M7 779 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 LRFN2Q9ULH4 789 aa13.85□□□□□ -0.19
SLX4-201ENST00000294008 LUC7L2Q9Y383 392 aaKnown RBP13.85□□□□□ -0.19
SLX4-201ENST00000294008 CALML3P27482 149 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 SSFA2P28290 1259 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 AOPEPQ8N6M6 819 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 PGBD1Q96JS3 809 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 CCDC68Q9H2F9 335 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 DDX19AQ9NUU7 478 aaKnown RBP13.84□□□□□ -0.19
SLX4-201ENST00000294008 PARP1P09874 1014 aaKnown RBP13.84□□□□□ -0.19
SLX4-201ENST00000294008 COG7P83436 770 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 HS1BP3Q53T59 392 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 RPAP2Q8IXW5 612 aaPredicted RBP13.84□□□□□ -0.19
SLX4-201ENST00000294008 LARGE2Q8N3Y3 721 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 FAM95CA0A1B0GW59 222 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 CAPN2P17655 700 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 GNAQP50148 359 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 TRIM50Q86XT4 487 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 CCDC94Q9BW85 323 aaPredicted RBP13.84□□□□□ -0.19
SLX4-201ENST00000294008 NFKBIL1Q9UBC1 381 aaPredicted RBP13.84□□□□□ -0.19
SLX4-201ENST00000294008 ASIC3Q9UHC3 531 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 CCNT1O60563 726 aaKnown RBP13.84□□□□□ -0.19
SLX4-201ENST00000294008 SYF2O95926 243 aaKnown RBP13.84□□□□□ -0.19
SLX4-201ENST00000294008 LRMPQ12912 555 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 SLC9C2Q5TAH2 1124 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 CAPN12Q6ZSI9 719 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 ARHGAP27Q6ZUM4 889 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 SND1Q7KZF4 910 aaKnown RBP eCLIP13.84□□□□□ -0.19
SLX4-201ENST00000294008 RBM17Q96I25 401 aaKnown RBP13.84□□□□□ -0.19
SLX4-201ENST00000294008 ARHGEF10LQ9HCE6 1279 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 PDE3AQ14432 1141 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 CTAGE3PQ8IX95 158 aa13.84□□□□□ -0.19
SLX4-201ENST00000294008 RSRC1Q96IZ7 334 aaKnown RBP13.84□□□□□ -0.19
SLX4-201ENST00000294008 KRT86O43790 486 aa13.83□□□□□ -0.19
SLX4-201ENST00000294008 TMEM259Q4ZIN3 620 aa13.83□□□□□ -0.19
SLX4-201ENST00000294008 NME8Q8N427 588 aa13.83□□□□□ -0.19
SLX4-201ENST00000294008 TNPO1Q92973 898 aaKnown RBP13.83□□□□□ -0.19
SLX4-201ENST00000294008 ARHGEF35A5YM69 484 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 TOM1O60784 492 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 BRF1Q92994 677 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 TEX13AQ9BXU3 409 aaPredicted RBP13.83□□□□□ -0.2
SLX4-201ENST00000294008 NYXQ9GZU5 481 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 MCM4P33991 863 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 GBP1P32455 592 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 TRAPPC10P48553 1259 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 DTHD1Q6ZMT9 781 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 PNMA8AQ86V59 439 aaPredicted RBP13.83□□□□□ -0.2
SLX4-201ENST00000294008 GDAP1Q8TB36 358 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 SH2D4AQ9H788 454 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 ARFGAP3Q9NP61 516 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 ANAPC5Q9UJX4 755 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 CTNND2Q9UQB3 1225 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 BCS1LQ9Y276 419 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 ZBED4O75132 1171 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 FGD4Q96M96 766 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 EFCC1Q9HA90 598 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 DDX21Q9NR30 783 aaKnown RBP eCLIP13.83□□□□□ -0.2
SLX4-201ENST00000294008 CCDC171Q6TFL3 1326 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 VPS8Q8N3P4 1428 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 KRT83P78385 493 aa13.83□□□□□ -0.2
SLX4-201ENST00000294008 MKRN3Q13064 507 aaKnown RBP13.83□□□□□ -0.2
SLX4-201ENST00000294008 ARHGAP42A6NI28 874 aa13.82□□□□□ -0.2
SLX4-201ENST00000294008 ANO6Q4KMQ2 910 aa13.82□□□□□ -0.2
SLX4-201ENST00000294008 ZNF449Q6P9G9 518 aa13.82□□□□□ -0.2
SLX4-201ENST00000294008 PHLDB2Q86SQ0 1253 aa13.82□□□□□ -0.2
SLX4-201ENST00000294008 VPS37BQ9H9H4 285 aa13.82□□□□□ -0.2
SLX4-201ENST00000294008 PRDM5Q9NQX1 630 aaPredicted RBP13.82□□□□□ -0.2
SLX4-201ENST00000294008 RNF8O76064 485 aa13.82□□□□□ -0.2
SLX4-201ENST00000294008 ATP5DP30049 168 aa13.82□□□□□ -0.2
SLX4-201ENST00000294008 MAP10Q9P2G4 905 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms