RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 ADCY3O60266 1144 aa13.43□□□□□ -0.26
NSMCE2-201ENST00000287437 LDHBP07195 334 aaKnown RBP13.43□□□□□ -0.26
NSMCE2-201ENST00000287437 ELNP15502 786 aa13.43□□□□□ -0.26
NSMCE2-201ENST00000287437 RFX5P48382 616 aaPredicted RBP13.43□□□□□ -0.26
NSMCE2-201ENST00000287437 FLT3LGP49771 235 aa13.43□□□□□ -0.26
NSMCE2-201ENST00000287437 PRRT2Q7Z6L0 340 aaPredicted RBP13.43□□□□□ -0.26
NSMCE2-201ENST00000287437 SCYL3Q8IZE3 742 aa13.43□□□□□ -0.26
NSMCE2-201ENST00000287437 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
NSMCE2-201ENST00000287437 ZHX2Q9Y6X8 837 aa13.43□□□□□ -0.26
NSMCE2-201ENST00000287437 LAMA3Q16787 3333 aa13.43□□□□□ -0.26
NSMCE2-201ENST00000287437 SGPL1O95470 568 aa13.42□□□□□ -0.26
NSMCE2-201ENST00000287437 INHAP05111 366 aa13.42□□□□□ -0.26
NSMCE2-201ENST00000287437 SLURP2P0DP57 97 aa13.42□□□□□ -0.26
NSMCE2-201ENST00000287437 PTPRAP18433 802 aa13.42□□□□□ -0.26
NSMCE2-201ENST00000287437 GADL1Q6ZQY3 521 aa13.42□□□□□ -0.26
NSMCE2-201ENST00000287437 FASTKD5Q7L8L6 764 aaKnown RBP13.42□□□□□ -0.26
NSMCE2-201ENST00000287437 ATG9AQ7Z3C6 839 aa13.42□□□□□ -0.26
NSMCE2-201ENST00000287437 DEFB118Q96PH6 123 aa13.42□□□□□ -0.26
NSMCE2-201ENST00000287437 PICK1Q9NRD5 415 aa13.42□□□□□ -0.26
NSMCE2-201ENST00000287437 MYH13Q9UKX3 1938 aa13.42□□□□□ -0.26
NSMCE2-201ENST00000287437 SOX1O00570 391 aaPredicted RBP13.41□□□□□ -0.26
NSMCE2-201ENST00000287437 TNPO2O14787 897 aaKnown RBP13.41□□□□□ -0.26
NSMCE2-201ENST00000287437 EVI5O60447 810 aa13.41□□□□□ -0.26
NSMCE2-201ENST00000287437 RGS3P49796 1198 aa13.41□□□□□ -0.26
NSMCE2-201ENST00000287437 SIL1Q9H173 461 aa13.41□□□□□ -0.26
NSMCE2-201ENST00000287437 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.41□□□□□ -0.26
NSMCE2-201ENST00000287437 AFG3L2Q9Y4W6 797 aa13.41□□□□□ -0.26
NSMCE2-201ENST00000287437 AK9Q5TCS8 1911 aa13.41□□□□□ -0.26
NSMCE2-201ENST00000287437 PTPRCP08575 1304 aa13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 MGAMO43451 1857 aa13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 TRIM75PA6NK02 468 aa13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 TFRCP02786 760 aaKnown RBP13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 PHKA1P46020 1223 aa13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 ATP2B3Q16720 1220 aa13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 SH3BP5LQ7L8J4 393 aa13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 ZSCAN29Q8IWY8 852 aaPredicted RBP13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 PXYLP1Q8TE99 480 aa13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 SMCR8Q8TEV9 937 aaPredicted RBP13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 LRCH3Q96II8 777 aa13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 GNL3LQ9NVN8 582 aaKnown RBP13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 COL6A3P12111 3177 aa13.4□□□□□ -0.26
NSMCE2-201ENST00000287437 SALL1Q9NSC2 1324 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 DOCK2Q92608 1830 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 DDTLA6NHG4 134 aaPredicted RBP13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 DLL1O00548 723 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 ENTPD3O75355 529 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 IRF5Q13568 498 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 CCDC84Q86UT8 332 aaPredicted RBP13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 FAM9BQ8IZU0 186 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 ANKRD13CQ8N6S4 541 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 SLC17A8Q8NDX2 589 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 IDI2Q9BXS1 227 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 PAK6Q9NQU5 681 aaPredicted RBP13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 STAP2Q9UGK3 403 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 DENND2AQ9ULE3 1009 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 SLC45A1Q9Y2W3 748 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 RFX7Q2KHR2 1363 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 GAKO14976 1311 aa13.39□□□□□ -0.27
NSMCE2-201ENST00000287437 A0A1W2PPC1 479 aa13.38□□□□□ -0.27
NSMCE2-201ENST00000287437 ANP32CO43423 234 aa13.38□□□□□ -0.27
NSMCE2-201ENST00000287437 PICALMQ13492 652 aa13.38□□□□□ -0.27
NSMCE2-201ENST00000287437 DIS3LQ8TF46 1054 aaKnown RBP13.38□□□□□ -0.27
NSMCE2-201ENST00000287437 SSH1Q8WYL5 1049 aa13.38□□□□□ -0.27
NSMCE2-201ENST00000287437 PAWRQ96IZ0 340 aaKnown RBP13.38□□□□□ -0.27
NSMCE2-201ENST00000287437 DDX4Q9NQI0 724 aaKnown RBP13.38□□□□□ -0.27
NSMCE2-201ENST00000287437 CEP126Q9P2H0 1117 aa13.38□□□□□ -0.27
NSMCE2-201ENST00000287437 ZNF521Q96K83 1311 aa13.38□□□□□ -0.27
NSMCE2-201ENST00000287437 SEMA3EO15041 775 aa13.37□□□□□ -0.27
NSMCE2-201ENST00000287437 CTNND1O60716 968 aaKnown RBP13.37□□□□□ -0.27
NSMCE2-201ENST00000287437 CIAO1O76071 339 aa13.37□□□□□ -0.27
NSMCE2-201ENST00000287437 ADORA1P30542 326 aa13.37□□□□□ -0.27
NSMCE2-201ENST00000287437 MAP3K10Q02779 954 aa13.37□□□□□ -0.27
NSMCE2-201ENST00000287437 TREML2Q5T2D2 321 aa13.37□□□□□ -0.27
NSMCE2-201ENST00000287437 DZIP1Q86YF9 867 aaKnown RBP13.37□□□□□ -0.27
NSMCE2-201ENST00000287437 COA7Q96BR5 231 aa13.37□□□□□ -0.27
NSMCE2-201ENST00000287437 CRISPLD2Q9H0B8 497 aa13.37□□□□□ -0.27
NSMCE2-201ENST00000287437 AGTPBP1Q9UPW5 1226 aa13.37□□□□□ -0.27
NSMCE2-201ENST00000287437 DOCK1Q14185 1865 aa13.36□□□□□ -0.27
NSMCE2-201ENST00000287437 BTDP43251 543 aa13.36□□□□□ -0.27
NSMCE2-201ENST00000287437 CCDC102BQ68D86 513 aa13.36□□□□□ -0.27
NSMCE2-201ENST00000287437 ZGPATQ8N5A5 531 aaKnown RBP13.36□□□□□ -0.27
NSMCE2-201ENST00000287437 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.36□□□□□ -0.27
NSMCE2-201ENST00000287437 ABCF2Q9UG63 623 aa13.36□□□□□ -0.27
NSMCE2-201ENST00000287437 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
NSMCE2-201ENST00000287437 PTPRFP10586 1907 aa13.35□□□□□ -0.27
NSMCE2-201ENST00000287437 FAM196BA6NMK8 535 aa13.35□□□□□ -0.27
NSMCE2-201ENST00000287437 UBTFL1P0CB47 393 aaPredicted RBP13.35□□□□□ -0.27
NSMCE2-201ENST00000287437 RASGRF1Q13972 1273 aa13.35□□□□□ -0.27
NSMCE2-201ENST00000287437 FAM110CQ1W6H9 321 aa13.35□□□□□ -0.27
NSMCE2-201ENST00000287437 NECAB2Q7Z6G3 386 aa13.35□□□□□ -0.27
NSMCE2-201ENST00000287437 C7orf61Q8IZ16 206 aa13.35□□□□□ -0.27
NSMCE2-201ENST00000287437 PA2G4Q9UQ80 394 aaKnown RBP13.35□□□□□ -0.27
NSMCE2-201ENST00000287437 PHIPQ8WWQ0 1821 aa13.34□□□□□ -0.27
NSMCE2-201ENST00000287437 CAPN2P17655 700 aa13.34□□□□□ -0.27
NSMCE2-201ENST00000287437 IL15P40933 162 aaPredicted RBP13.34□□□□□ -0.27
NSMCE2-201ENST00000287437 PNMA3Q9UL41 463 aa13.34□□□□□ -0.27
NSMCE2-201ENST00000287437 ZMYND8Q9ULU4 1186 aaPredicted RBP13.34□□□□□ -0.27
NSMCE2-201ENST00000287437 MYH2Q9UKX2 1941 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms