RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 POLR2BP30876 1174 aaKnown RBP4.54□□□□□ -1.68
SCN3A-201ENST00000283254 ADCY7P51828 1080 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 LACTBP83111 547 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-201ENST00000283254 COPS6Q7L5N1 327 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 NLRX1Q86UT6 975 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.54□□□□□ -1.68
SCN3A-201ENST00000283254 TMEM87BQ96K49 555 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 RIOK1Q9BRS2 568 aaKnown RBP4.54□□□□□ -1.68
SCN3A-201ENST00000283254 PRKAG2Q9UGJ0 569 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 DUOX2Q9NRD8 1548 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 AOX1Q06278 1338 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 EBAG9O00559 213 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 N4BP1O75113 896 aaKnown RBP4.54□□□□□ -1.68
SCN3A-201ENST00000283254 SYT1P21579 422 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 RAPGEF1Q13905 1077 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 MAIP1Q8WWC4 291 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 CD2APQ9Y5K6 639 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 ELP1O95163 1332 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 ALDH1B1P30837 517 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 AFMP43652 599 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 ITIH3Q06033 890 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 TBC1D9Q6ZT07 1266 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 MCF2L2Q86YR7 1114 aa4.54□□□□□ -1.68
SCN3A-201ENST00000283254 NPATQ14207 1427 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 H0YIN7 160 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 TRAF5O00463 557 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 MNAT1P51948 309 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 EVCP57679 992 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 CHRNA2Q15822 529 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 DCUN1D2Q6PH85 259 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 TMC4Q7Z404 712 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 PAIP2Q9BPZ3 127 aaKnown RBP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 AGTPBP1Q9UPW5 1226 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 F8W8V4 182 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 FAM160A1Q05DH4 1040 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 DNAJC21Q5F1R6 531 aaKnown RBP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 PPP1R2P3Q6NXS1 205 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 ZNF449Q6P9G9 518 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 DPP8Q6V1X1 898 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 DHX32Q7L7V1 743 aaKnown RBP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 ZBTB8OSQ8IWT0 167 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 ATRIPQ8WXE1 791 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 P3H4Q92791 437 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 JPH2Q9BR39 696 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 ADCY5O95622 1261 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 BCRP11274 1271 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 HOXA7P31268 230 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 GUCY1B3Q02153 619 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 RAB3GAP1Q15042 981 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 CCDC62Q6P9F0 684 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 CPLX4Q7Z7G2 160 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 CACNA2D3Q8IZS8 1091 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 VPS52Q8N1B4 723 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 REXO1Q8N1G1 1221 aaKnown RBP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 SMARCA5O60264 1052 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 SARNPP82979 210 aaKnown RBP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 INTS8Q75QN2 995 aaKnown RBP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 FAM212AQ96EL1 285 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 ADPGKQ9BRR6 497 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 AFG3L2Q9Y4W6 797 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 ABCD1P33897 745 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 PDE1AP54750 535 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 NSMFQ6X4W1 530 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 SND1Q7KZF4 910 aaKnown RBP eCLIP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 ANKRD44Q8N8A2 993 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 TRIM37O94972 964 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 TSNAXIP1Q2TAA8 658 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 FCHSD1Q86WN1 690 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 CHURC1Q8WUH1 139 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 EPSTI1Q96J88 318 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 HELLSQ9NRZ9 838 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 UHRF1BP1Q6BDS2 1440 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 KDM3AQ9Y4C1 1321 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 ASXL1Q8IXJ9 1541 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 YEATS2Q9ULM3 1422 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 PSDA5PKW4 1024 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 MTMR3Q13615 1198 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 TTLL7Q6ZT98 887 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 RSPH3Q86UC2 560 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 TICAM2Q86XR7 235 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 GLG1Q92896 1179 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 INTS4Q96HW7 963 aaKnown RBP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 NBPF3Q9H094 633 aa4.53□□□□□ -1.68
SCN3A-201ENST00000283254 TTF2Q9UNY4 1162 aaKnown RBP4.53□□□□□ -1.68
SCN3A-201ENST00000283254 GBP1P32455 592 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 NEDD9Q14511 834 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 NONOQ15233 471 aaKnown RBP eCLIP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 HS1BP3Q53T59 392 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 BBS5Q8N3I7 341 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 CCDC68Q9H2F9 335 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 SERPINA10Q9UK55 444 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 XPOTO43592 962 aaKnown RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 TMOD1P28289 359 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 EXOC8Q8IYI6 725 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 MPNDQ8N594 471 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 BRPF3Q9ULD4 1205 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 MROH5Q6ZUA9 1318 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 TRAPPC8Q9Y2L5 1435 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 PTPDC1A2A3K4 754 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms