RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 NFKBIEO00221 500 aa15.72■□□□□ 0.11
ACER3-201ENST00000278544 ZFPM1Q8IX07 1006 aa15.72■□□□□ 0.11
ACER3-201ENST00000278544 RTKN2Q8IZC4 609 aa15.72■□□□□ 0.11
ACER3-201ENST00000278544 PIBF1Q8WXW3 757 aa15.72■□□□□ 0.11
ACER3-201ENST00000278544 TDRD3Q9H7E2 651 aaKnown RBP15.72■□□□□ 0.11
ACER3-201ENST00000278544 RPAP1Q9BWH6 1393 aaPredicted RBP15.72■□□□□ 0.11
ACER3-201ENST00000278544 C15orf52Q6ZUT6 534 aaKnown RBP15.72■□□□□ 0.11
ACER3-201ENST00000278544 NIM1KQ8IY84 436 aa15.72■□□□□ 0.11
ACER3-201ENST00000278544 TBC1D22AQ8WUA7 517 aa15.72■□□□□ 0.11
ACER3-201ENST00000278544 ARAP2Q8WZ64 1704 aa15.71■□□□□ 0.11
ACER3-201ENST00000278544 IFIT3O14879 490 aaKnown RBP15.71■□□□□ 0.11
ACER3-201ENST00000278544 DACT2Q5SW24 774 aa15.71■□□□□ 0.11
ACER3-201ENST00000278544 AKNAD1Q5T1N1 836 aa15.71■□□□□ 0.11
ACER3-201ENST00000278544 JDP2Q8WYK2 163 aa15.71■□□□□ 0.11
ACER3-201ENST00000278544 KLF18A0A0U1RQI7 1052 aa15.71■□□□□ 0.11
ACER3-201ENST00000278544 LDHCP07864 332 aa15.71■□□□□ 0.11
ACER3-201ENST00000278544 CRKP46108 304 aa15.71■□□□□ 0.11
ACER3-201ENST00000278544 NUP133Q8WUM0 1156 aa15.71■□□□□ 0.11
ACER3-201ENST00000278544 KCNB2Q92953 911 aa15.71■□□□□ 0.11
ACER3-201ENST00000278544 MCM5P33992 734 aa15.71■□□□□ 0.1
ACER3-201ENST00000278544 GSTO1P78417 241 aa15.71■□□□□ 0.1
ACER3-201ENST00000278544 ST3GAL1Q11201 340 aa15.71■□□□□ 0.1
ACER3-201ENST00000278544 DDX4Q9NQI0 724 aaKnown RBP15.71■□□□□ 0.1
ACER3-201ENST00000278544 GNAT2P19087 354 aa15.7■□□□□ 0.1
ACER3-201ENST00000278544 TMEM67Q5HYA8 995 aa15.7■□□□□ 0.1
ACER3-201ENST00000278544 TEKT1Q969V4 418 aa15.7■□□□□ 0.1
ACER3-201ENST00000278544 TM6SF1Q9BZW5 370 aa15.7■□□□□ 0.1
ACER3-201ENST00000278544 VEZTQ9HBM0 779 aa15.7■□□□□ 0.1
ACER3-201ENST00000278544 BAZ2BQ9UIF8 2168 aaKnown RBP15.7■□□□□ 0.1
ACER3-201ENST00000278544 SCN9AQ15858 1988 aa15.7■□□□□ 0.1
ACER3-201ENST00000278544 IARSP41252 1262 aaKnown RBP15.7■□□□□ 0.1
ACER3-201ENST00000278544 PRELPP51888 382 aa15.7■□□□□ 0.1
ACER3-201ENST00000278544 EIF6P56537 245 aaKnown RBP15.7■□□□□ 0.1
ACER3-201ENST00000278544 GUCY1B3Q02153 619 aa15.7■□□□□ 0.1
ACER3-201ENST00000278544 FERMT3Q86UX7 667 aa15.7■□□□□ 0.1
ACER3-201ENST00000278544 BRPF3Q9ULD4 1205 aa15.7■□□□□ 0.1
ACER3-201ENST00000278544 SMC3Q9UQE7 1217 aa15.7■□□□□ 0.1
ACER3-201ENST00000278544 RAD21O60216 631 aa15.69■□□□□ 0.1
ACER3-201ENST00000278544 VPS37CA5D8V6 355 aaPredicted RBP15.69■□□□□ 0.1
ACER3-201ENST00000278544 GOLGA8BA8MQT2 603 aa15.69■□□□□ 0.1
ACER3-201ENST00000278544 TCP10L2B9ZVM9 353 aa15.69■□□□□ 0.1
ACER3-201ENST00000278544 CXCL9Q07325 125 aa15.69■□□□□ 0.1
ACER3-201ENST00000278544 CLEC10AQ8IUN9 316 aa15.69■□□□□ 0.1
ACER3-201ENST00000278544 MKNK2Q9HBH9 465 aa15.69■□□□□ 0.1
ACER3-201ENST00000278544 MB21D2Q8IYB1 491 aaPredicted RBP15.69■□□□□ 0.1
ACER3-201ENST00000278544 PRMT6Q96LA8 375 aaPredicted RBP15.69■□□□□ 0.1
ACER3-201ENST00000278544 FAM205AQ6ZU69 1335 aa15.69■□□□□ 0.1
ACER3-201ENST00000278544 GJB2P29033 226 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 STRIP1Q5VSL9 837 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 hCG_1642624A0A1W2PR95 340 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 EGFRP00533 1210 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 RHBDL3P58872 404 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 CDC42EP5Q6NZY7 148 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 SYT17Q9BSW7 474 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 CHMP5Q9NZZ3 219 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 MYH2Q9UKX2 1941 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 UBE2Q2LH0YL09 131 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 EPB41L2O43491 1005 aaKnown RBP15.68■□□□□ 0.1
ACER3-201ENST00000278544 SCRN1Q12765 414 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 NFKBIBQ15653 356 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 CFAP100Q494V2 611 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 SUPT20HQ8NEM7 779 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 GJB4Q9NTQ9 266 aa15.68■□□□□ 0.1
ACER3-201ENST00000278544 EXOSC10Q01780 885 aaKnown RBP15.67■□□□□ 0.1
ACER3-201ENST00000278544 ATP2B2Q01814 1243 aa15.67■□□□□ 0.1
ACER3-201ENST00000278544 APOBEC3HQ6NTF7 200 aaKnown RBP15.67■□□□□ 0.1
ACER3-201ENST00000278544 CD2APQ9Y5K6 639 aa15.67■□□□□ 0.1
ACER3-201ENST00000278544 FLT1P17948 1338 aa15.67■□□□□ 0.1
ACER3-201ENST00000278544 SALL1Q9NSC2 1324 aa15.67■□□□□ 0.1
ACER3-201ENST00000278544 TSPY2A6NKD2 308 aa15.67■□□□□ 0.1
ACER3-201ENST00000278544 ADD1P35611 737 aaKnown RBP15.67■□□□□ 0.1
ACER3-201ENST00000278544 SHROOM1Q2M3G4 852 aaPredicted RBP15.67■□□□□ 0.1
ACER3-201ENST00000278544 TSGA10IPQ3SY00 556 aa15.67■□□□□ 0.1
ACER3-201ENST00000278544 CC2D2BQ6DHV5 1058 aa15.67■□□□□ 0.1
ACER3-201ENST00000278544 UBAC1Q9BSL1 405 aa15.67■□□□□ 0.1
ACER3-201ENST00000278544 COL4A5P29400 1685 aa15.67■□□□□ 0.1
ACER3-201ENST00000278544 GPR75-ASB3A0A0A6YYF3 556 aa15.67■□□□□ 0.1
ACER3-201ENST00000278544 MCM2P49736 904 aa15.67■□□□□ 0.1
ACER3-201ENST00000278544 RASGRP2Q7LDG7 609 aa15.67■□□□□ 0.1
ACER3-201ENST00000278544 ISY1Q9ULR0 285 aaKnown RBP15.67■□□□□ 0.1
ACER3-201ENST00000278544 OTUD7BQ6GQQ9 843 aa15.66■□□□□ 0.1
ACER3-201ENST00000278544 FAM173BQ6P4H8 233 aa15.66■□□□□ 0.1
ACER3-201ENST00000278544 CDAN1Q8IWY9 1227 aa15.66■□□□□ 0.1
ACER3-201ENST00000278544 OGFOD1Q8N543 542 aa15.66■□□□□ 0.1
ACER3-201ENST00000278544 SAMD7Q7Z3H4 446 aa15.66■□□□□ 0.1
ACER3-201ENST00000278544 TNPO1Q92973 898 aaKnown RBP15.66■□□□□ 0.1
ACER3-201ENST00000278544 STX8Q9UNK0 236 aa15.66■□□□□ 0.1
ACER3-201ENST00000278544 GDPD2Q9HCC8 539 aa15.65■□□□□ 0.1
ACER3-201ENST00000278544 ZNRF3Q9ULT6 936 aa15.65■□□□□ 0.1
ACER3-201ENST00000278544 WDHD1O75717 1129 aaPredicted RBP15.65■□□□□ 0.1
ACER3-201ENST00000278544 TFAP4Q01664 338 aa15.65■□□□□ 0.1
ACER3-201ENST00000278544 TBC1D10BQ4KMP7 808 aaPredicted RBP15.65■□□□□ 0.1
ACER3-201ENST00000278544 PHKBQ93100 1093 aa15.65■□□□□ 0.1
ACER3-201ENST00000278544 ATP8A2Q9NTI2 1148 aa15.65■□□□□ 0.1
ACER3-201ENST00000278544 HMGB1P09429 215 aaKnown RBP15.65■□□□□ 0.1
ACER3-201ENST00000278544 PDIA3P30101 505 aaKnown RBP15.65■□□□□ 0.1
ACER3-201ENST00000278544 PDS5AQ29RF7 1337 aaKnown RBP15.65■□□□□ 0.1
ACER3-201ENST00000278544 MPHOSPH10O00566 681 aaKnown RBP15.64■□□□□ 0.09
ACER3-201ENST00000278544 ALX1Q15699 326 aa15.64■□□□□ 0.09
ACER3-201ENST00000278544 NBPF9Q3BBW0 867 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms