RNA–Protein interactions for RNA: ENST00000277480.6

LCN2-201, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LCN2, Length 822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-201ENST00000277480 TM6SF1Q9BZW5 370 aa12.05□□□□□ -0.48
LCN2-201ENST00000277480 TDRD3Q9H7E2 651 aaKnown RBP12.05□□□□□ -0.48
LCN2-201ENST00000277480 FAM198AQ9UFP1 575 aa12.05□□□□□ -0.48
LCN2-201ENST00000277480 SAP30BPQ9UHR5 308 aaKnown RBP12.05□□□□□ -0.48
LCN2-201ENST00000277480 ANAPC4Q9UJX5 808 aa12.05□□□□□ -0.48
LCN2-201ENST00000277480 HDAC9Q9UKV0 1011 aa12.05□□□□□ -0.48
LCN2-201ENST00000277480 DDX60LQ5H9U9 1706 aaKnown RBP12.05□□□□□ -0.48
LCN2-201ENST00000277480 TIAM2Q8IVF5 1701 aa12.05□□□□□ -0.48
LCN2-201ENST00000277480 NEDD4P46934 1319 aa12.05□□□□□ -0.48
LCN2-201ENST00000277480 DICER1Q9UPY3 1922 aaKnown RBP12.04□□□□□ -0.48
LCN2-201ENST00000277480 MINDY4BA8MYZ0 360 aa12.04□□□□□ -0.48
LCN2-201ENST00000277480 GRIN3BO60391 1043 aa12.04□□□□□ -0.48
LCN2-201ENST00000277480 CASTP20810 708 aaKnown RBP12.04□□□□□ -0.48
LCN2-201ENST00000277480 ANP32AP39687 249 aaKnown RBP12.04□□□□□ -0.48
LCN2-201ENST00000277480 PICALMQ13492 652 aa12.04□□□□□ -0.48
LCN2-201ENST00000277480 DLGAP5Q15398 846 aa12.04□□□□□ -0.48
LCN2-201ENST00000277480 SLC4A8Q2Y0W8 1093 aa12.04□□□□□ -0.48
LCN2-201ENST00000277480 MICALL2Q8IY33 904 aa12.04□□□□□ -0.48
LCN2-201ENST00000277480 STK11IPQ8N1F8 1099 aa12.04□□□□□ -0.48
LCN2-201ENST00000277480 DPF2Q92785 391 aa12.04□□□□□ -0.48
LCN2-201ENST00000277480 NEK1Q96PY6 1258 aa12.04□□□□□ -0.48
LCN2-201ENST00000277480 MCM9Q9NXL9 1143 aa12.04□□□□□ -0.48
LCN2-201ENST00000277480 UTRNP46939 3433 aa12.04□□□□□ -0.48
LCN2-201ENST00000277480 LAMA4Q16363 1823 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 CLRN2A0PK11 232 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 DDNO94850 711 aaPredicted RBP12.03□□□□□ -0.48
LCN2-201ENST00000277480 RPS6KB1P23443 525 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 PLCD1P51178 756 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 NEK4P51957 841 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 KRT32Q14532 448 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 NBPF9Q3BBW0 867 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 C12orf60Q5U649 245 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 RUFY3Q7L099 469 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 MB21D2Q8IYB1 491 aaPredicted RBP12.03□□□□□ -0.48
LCN2-201ENST00000277480 GPC2Q8N158 579 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 OGFOD1Q8N543 542 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 SNX21Q969T3 373 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 TCEANC2Q96MN5 208 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 IDI2Q9BXS1 227 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 TBC1D2Q9BYX2 928 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 OSBPL5Q9H0X9 879 aaPredicted RBP12.03□□□□□ -0.48
LCN2-201ENST00000277480 MYOZ2Q9NPC6 264 aa12.03□□□□□ -0.48
LCN2-201ENST00000277480 ARPP21Q9UBL0 812 aaPredicted RBP12.03□□□□□ -0.48
LCN2-201ENST00000277480 CNOT7Q9UIV1 285 aaKnown RBP12.03□□□□□ -0.48
LCN2-201ENST00000277480 NAV1Q8NEY1 1877 aa12.02□□□□□ -0.48
LCN2-201ENST00000277480 CDK5RAP2Q96SN8 1893 aa12.02□□□□□ -0.48
LCN2-201ENST00000277480 WNT10BO00744 389 aa12.02□□□□□ -0.49
LCN2-201ENST00000277480 FGRP09769 529 aa12.02□□□□□ -0.49
LCN2-201ENST00000277480 PSMA5P28066 241 aa12.02□□□□□ -0.49
LCN2-201ENST00000277480 ANTXR2P58335 489 aa12.02□□□□□ -0.49
LCN2-201ENST00000277480 EXOSC10Q01780 885 aaKnown RBP12.02□□□□□ -0.49
LCN2-201ENST00000277480 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.49
LCN2-201ENST00000277480 AKNAD1Q5T1N1 836 aa12.02□□□□□ -0.49
LCN2-201ENST00000277480 RBM26Q5T8P6 1007 aaKnown RBP12.02□□□□□ -0.49
LCN2-201ENST00000277480 CYB5R4Q7L1T6 521 aa12.02□□□□□ -0.49
LCN2-201ENST00000277480 SH3BP5LQ7L8J4 393 aa12.02□□□□□ -0.49
LCN2-201ENST00000277480 SAMD7Q7Z3H4 446 aa12.02□□□□□ -0.49
LCN2-201ENST00000277480 STAG1Q8WVM7 1258 aa12.02□□□□□ -0.49
LCN2-201ENST00000277480 DYNLL2Q96FJ2 89 aa12.02□□□□□ -0.49
LCN2-201ENST00000277480 ZNF70Q9UC06 446 aaPredicted RBP12.02□□□□□ -0.49
LCN2-201ENST00000277480 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.02□□□□□ -0.49
LCN2-201ENST00000277480 CYP46A1Q9Y6A2 500 aa12.02□□□□□ -0.49
LCN2-201ENST00000277480 ASTN2O75129 1339 aaPredicted RBP12.02□□□□□ -0.49
LCN2-201ENST00000277480 B4E1Z4 1266 aa12.01□□□□□ -0.49
LCN2-201ENST00000277480 SLURP2P0DP57 97 aa12.01□□□□□ -0.49
LCN2-201ENST00000277480 EPS15P42566 896 aa12.01□□□□□ -0.49
LCN2-201ENST00000277480 SLC4A3P48751 1232 aa12.01□□□□□ -0.49
LCN2-201ENST00000277480 AK2P54819 239 aa12.01□□□□□ -0.49
LCN2-201ENST00000277480 TBC1D10BQ4KMP7 808 aaPredicted RBP12.01□□□□□ -0.49
LCN2-201ENST00000277480 BLOC1S2Q6QNY1 142 aa12.01□□□□□ -0.49
LCN2-201ENST00000277480 CHST3Q7LGC8 479 aa12.01□□□□□ -0.49
LCN2-201ENST00000277480 TRPM4Q8TD43 1214 aa12.01□□□□□ -0.49
LCN2-201ENST00000277480 LRRC2Q9BYS8 371 aa12.01□□□□□ -0.49
LCN2-201ENST00000277480 PDRG1Q9NUG6 133 aa12.01□□□□□ -0.49
LCN2-201ENST00000277480 GPRC5DQ9NZD1 345 aa12.01□□□□□ -0.49
LCN2-201ENST00000277480 CNTNAP1P78357 1384 aa12.01□□□□□ -0.49
LCN2-201ENST00000277480 ROBO3Q96MS0 1386 aa12.01□□□□□ -0.49
LCN2-201ENST00000277480 BAZ2AQ9UIF9 1905 aaKnown RBP12.01□□□□□ -0.49
LCN2-201ENST00000277480 FOCADQ5VW36 1801 aa12□□□□□ -0.49
LCN2-201ENST00000277480 DDTLA6NHG4 134 aaPredicted RBP12□□□□□ -0.49
LCN2-201ENST00000277480 TCP10L2B9ZVM9 353 aa12□□□□□ -0.49
LCN2-201ENST00000277480 NPM3O75607 178 aaKnown RBP12□□□□□ -0.49
LCN2-201ENST00000277480 PRDM1O75626 825 aa12□□□□□ -0.49
LCN2-201ENST00000277480 POLR3DP05423 398 aaPredicted RBP12□□□□□ -0.49
LCN2-201ENST00000277480 MMP14P50281 582 aa12□□□□□ -0.49
LCN2-201ENST00000277480 HIRAP54198 1017 aaPredicted RBP12□□□□□ -0.49
LCN2-201ENST00000277480 TCP10Q12799 353 aa12□□□□□ -0.49
LCN2-201ENST00000277480 TOB2Q14106 344 aaPredicted RBP12□□□□□ -0.49
LCN2-201ENST00000277480 DHX32Q7L7V1 743 aaKnown RBP12□□□□□ -0.49
LCN2-201ENST00000277480 SLC44A5Q8NCS7 719 aa12□□□□□ -0.49
LCN2-201ENST00000277480 NCOA7Q8NI08 942 aa12□□□□□ -0.49
LCN2-201ENST00000277480 DDRGK1Q96HY6 314 aa12□□□□□ -0.49
LCN2-201ENST00000277480 LARP6Q9BRS8 491 aaKnown RBP12□□□□□ -0.49
LCN2-201ENST00000277480 ALDH8A1Q9H2A2 487 aaPredicted RBP12□□□□□ -0.49
LCN2-201ENST00000277480 GPHNQ9NQX3 736 aaPredicted RBP12□□□□□ -0.49
LCN2-201ENST00000277480 LAMB1P07942 1786 aa12□□□□□ -0.49
LCN2-201ENST00000277480 ST18O60284 1047 aa11.99□□□□□ -0.49
LCN2-201ENST00000277480 ENTPD3O75355 529 aa11.99□□□□□ -0.49
LCN2-201ENST00000277480 GABPAQ06546 454 aa11.99□□□□□ -0.49
LCN2-201ENST00000277480 KIF4BQ2VIQ3 1234 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms