RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 TMC6Q7Z403 805 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 V9GYY5 206 aaPredicted RBP12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 SLIT2O94813 1529 aa12.53□□□□□ -0.4
PRUNE1-201ENST00000271620 NUTM2BA6NNL0 878 aaPredicted RBP12.53□□□□□ -0.4
PRUNE1-201ENST00000271620 NUTM2EB1AL46 878 aaPredicted RBP12.53□□□□□ -0.4
PRUNE1-201ENST00000271620 CHRNDQ07001 517 aa12.53□□□□□ -0.4
PRUNE1-201ENST00000271620 NUTM2AQ8IVF1 878 aaPredicted RBP12.53□□□□□ -0.4
PRUNE1-201ENST00000271620 PDILTQ8N807 584 aa12.53□□□□□ -0.4
PRUNE1-201ENST00000271620 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
PRUNE1-201ENST00000271620 ERVV-1B6SEH8 477 aa12.53□□□□□ -0.4
PRUNE1-201ENST00000271620 CMA1P23946 247 aa12.53□□□□□ -0.4
PRUNE1-201ENST00000271620 GTF2F1P35269 517 aaKnown RBP eCLIP12.53□□□□□ -0.4
PRUNE1-201ENST00000271620 LONRF3Q496Y0 759 aa12.53□□□□□ -0.4
PRUNE1-201ENST00000271620 AKNAD1Q5T1N1 836 aa12.53□□□□□ -0.4
PRUNE1-201ENST00000271620 JAG2Q9Y219 1238 aa12.53□□□□□ -0.4
PRUNE1-201ENST00000271620 LOC102724428A0A0B4J2F2 783 aa12.52□□□□□ -0.4
PRUNE1-201ENST00000271620 CDKL5O76039 1030 aa12.52□□□□□ -0.4
PRUNE1-201ENST00000271620 IGHMBP2P38935 993 aaKnown RBP12.52□□□□□ -0.4
PRUNE1-201ENST00000271620 SIK1P57059 783 aa12.52□□□□□ -0.4
PRUNE1-201ENST00000271620 EVX2Q03828 476 aa12.52□□□□□ -0.4
PRUNE1-201ENST00000271620 GOLGA8FQ08AF8 430 aa12.52□□□□□ -0.4
PRUNE1-201ENST00000271620 GOLGA8DPQ0D2H9 430 aa12.52□□□□□ -0.4
PRUNE1-201ENST00000271620 DDB1Q16531 1140 aa12.52□□□□□ -0.4
PRUNE1-201ENST00000271620 PPP4R3BQ5MIZ7 849 aa12.52□□□□□ -0.4
PRUNE1-201ENST00000271620 C3orf67Q6ZVT6 689 aa12.52□□□□□ -0.4
PRUNE1-201ENST00000271620 ZNF512BQ96KM6 892 aaPredicted RBP12.52□□□□□ -0.4
PRUNE1-201ENST00000271620 CCDC87Q9NVE4 849 aa12.52□□□□□ -0.4
PRUNE1-201ENST00000271620 SPEF2Q9C093 1822 aa12.52□□□□□ -0.4
PRUNE1-201ENST00000271620 CCZ1BP86790 482 aa12.52□□□□□ -0.41
PRUNE1-201ENST00000271620 CCZ1P86791 482 aaPredicted RBP12.52□□□□□ -0.41
PRUNE1-201ENST00000271620 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.41
PRUNE1-201ENST00000271620 TMEM87BQ96K49 555 aa12.52□□□□□ -0.41
PRUNE1-201ENST00000271620 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.52□□□□□ -0.41
PRUNE1-201ENST00000271620 RAI14Q9P0K7 980 aa12.52□□□□□ -0.41
PRUNE1-201ENST00000271620 BAZ2BQ9UIF8 2168 aaKnown RBP12.52□□□□□ -0.41
PRUNE1-201ENST00000271620 ITGB4P16144 1822 aa12.52□□□□□ -0.41
PRUNE1-201ENST00000271620 NPHP1O15259 732 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 CYP7A1P22680 504 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 CBX1P83916 185 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 PTPAQ15257 358 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 FOXP4Q8IVH2 680 aaPredicted RBP12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 OXER1Q8TDS5 423 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 MAP3K14Q99558 947 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 ABCC12Q96J65 1359 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 MYH15Q9Y2K3 1946 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 KDM4FA0A1W2PPD8 638 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 CEP135Q66GS9 1140 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 DIS3L2Q8IYB7 885 aaKnown RBP12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 GRAMD1CQ8IYS0 662 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 ZMYND15Q9H091 742 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 CDC25BP30305 580 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 NCAPHQ15003 741 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 WTAPQ15007 396 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 ZNF827Q17R98 1081 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 CCDC152Q4G0S7 254 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 DPF2Q92785 391 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 MAP7D2Q96T17 732 aa12.51□□□□□ -0.41
PRUNE1-201ENST00000271620 CAMTA2O94983 1202 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 NLRP12P59046 1061 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 SGMS1Q86VZ5 419 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 MARCH10Q8NA82 808 aaPredicted RBP12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 CNNM3Q8NE01 707 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 NUP98P52948 1817 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 FAM205CA6NFA0 338 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 U2AF2P26368 475 aaKnown RBP eCLIP12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 TOB1P50616 345 aaPredicted RBP12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 DYNLL1P63167 89 aaKnown RBP12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 PTPN14Q15678 1187 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 RTN1Q16799 776 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 ARMCX5Q6P1M9 558 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 USP49Q70CQ1 688 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 METTL16Q86W50 562 aaKnown RBP12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 CCDC112Q8NEF3 446 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 NACAP1Q9BZK3 213 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 KCNH3Q9ULD8 1083 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 PCDHB6Q9Y5E3 794 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 WDR19Q8NEZ3 1342 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 MYH7P12883 1935 aa12.5□□□□□ -0.41
PRUNE1-201ENST00000271620 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 NOSTRINQ8IVI9 506 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 PCDHA5Q9Y5H7 936 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 ERICH2A1L162 156 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 SERPINC1P01008 464 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 KLRK1P26718 216 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 ERFEQ4G0M1 354 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 PDCL2Q8N4E4 241 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 UBAC1Q9BSL1 405 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 HSD3B7Q9H2F3 369 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 CABP5Q9NP86 173 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 ABCA3Q99758 1704 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 SRCAPQ6ZRS2 3230 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 LRP6O75581 1613 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 ATRNO75882 1429 aa12.49□□□□□ -0.41
PRUNE1-201ENST00000271620 NTSR2O95665 410 aa12.48□□□□□ -0.41
PRUNE1-201ENST00000271620 GTF2E1P29083 439 aaPredicted RBP12.48□□□□□ -0.41
PRUNE1-201ENST00000271620 LIFRP42702 1097 aa12.48□□□□□ -0.41
PRUNE1-201ENST00000271620 FANCCQ00597 558 aa12.48□□□□□ -0.41
PRUNE1-201ENST00000271620 PPARAQ07869 468 aa12.48□□□□□ -0.41
PRUNE1-201ENST00000271620 NCBP1Q09161 790 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms