RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 BRIP1Q9BX63 1249 aa16.66■□□□□ 0.26
PDLIM2-201ENST00000265810 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
PDLIM2-201ENST00000265810 PRDX5P30044 214 aa16.65■□□□□ 0.26
PDLIM2-201ENST00000265810 GTF3C6Q969F1 213 aa16.65■□□□□ 0.26
PDLIM2-201ENST00000265810 ATP8A2Q9NTI2 1148 aa16.65■□□□□ 0.26
PDLIM2-201ENST00000265810 MED1Q15648 1581 aaPredicted RBP16.65■□□□□ 0.26
PDLIM2-201ENST00000265810 LMOD1P29536 600 aaPredicted RBP16.65■□□□□ 0.26
PDLIM2-201ENST00000265810 NOC3LQ8WTT2 800 aaKnown RBP16.65■□□□□ 0.26
PDLIM2-201ENST00000265810 SPC24Q8NBT2 197 aa16.65■□□□□ 0.26
PDLIM2-201ENST00000265810 KCNG4Q8TDN1 519 aa16.65■□□□□ 0.26
PDLIM2-201ENST00000265810 FAM84BQ96KN1 310 aaPredicted RBP16.65■□□□□ 0.26
PDLIM2-201ENST00000265810 DACH1Q9UI36 760 aa16.65■□□□□ 0.26
PDLIM2-201ENST00000265810 PTF1AQ7RTS3 328 aa16.64■□□□□ 0.25
PDLIM2-201ENST00000265810 RAB34Q9BZG1 259 aa16.64■□□□□ 0.25
PDLIM2-201ENST00000265810 hCG_1642624A0A1W2PR95 340 aa16.64■□□□□ 0.25
PDLIM2-201ENST00000265810 SERPINC1P01008 464 aa16.64■□□□□ 0.25
PDLIM2-201ENST00000265810 ADD1P35611 737 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-201ENST00000265810 TMEM266Q2M3C6 531 aa16.64■□□□□ 0.25
PDLIM2-201ENST00000265810 DEXIO95424 95 aa16.64■□□□□ 0.25
PDLIM2-201ENST00000265810 CALML3P27482 149 aa16.64■□□□□ 0.25
PDLIM2-201ENST00000265810 STIM1Q13586 685 aa16.64■□□□□ 0.25
PDLIM2-201ENST00000265810 ZNF274Q96GC6 653 aaPredicted RBP16.64■□□□□ 0.25
PDLIM2-201ENST00000265810 STRBPQ96SI9 672 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-201ENST00000265810 CD209Q9NNX6 404 aa16.64■□□□□ 0.25
PDLIM2-201ENST00000265810 TNKSO95271 1327 aa16.64■□□□□ 0.25
PDLIM2-201ENST00000265810 ARHGAP27Q6ZUM4 889 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 ZNF654Q8IZM8 581 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 ANO8Q9HCE9 1232 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 ZNF142P52746 1687 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 C6orf50Q9HD87 102 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 CCDC39Q9UFE4 941 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 PEAK1Q9H792 1746 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 BIN1O00499 593 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 RGS12O14924 1447 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 SPTLC2O15270 562 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 RAD17O75943 681 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 UBA7P41226 1012 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 GPSM2P81274 684 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 CCDC93Q567U6 631 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 COA1Q9GZY4 146 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 TCP11L1Q9NUJ3 509 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 TRIM75PA6NK02 468 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 KRT2P35908 639 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 GIMAP6Q6P9H5 292 aa16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 CMTR1Q8N1G2 835 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 ZSCAN10Q96SZ4 725 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-201ENST00000265810 CYP2D7A0A087X1C5 515 aa16.62■□□□□ 0.25
PDLIM2-201ENST00000265810 CHGBP05060 677 aa16.62■□□□□ 0.25
PDLIM2-201ENST00000265810 EZH2Q15910 746 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-201ENST00000265810 DACT1Q9NYF0 836 aa16.62■□□□□ 0.25
PDLIM2-201ENST00000265810 CTAGE5O15320 804 aa16.62■□□□□ 0.25
PDLIM2-201ENST00000265810 BRAPQ7Z569 592 aa16.62■□□□□ 0.25
PDLIM2-201ENST00000265810 TCP10L2B9ZVM9 353 aa16.62■□□□□ 0.25
PDLIM2-201ENST00000265810 CC2D2BQ6DHV5 1058 aa16.62■□□□□ 0.25
PDLIM2-201ENST00000265810 CDC37L1Q7L3B6 337 aa16.62■□□□□ 0.25
PDLIM2-201ENST00000265810 DEFB132Q7Z7B7 95 aa16.62■□□□□ 0.25
PDLIM2-201ENST00000265810 ANO10Q9NW15 660 aa16.62■□□□□ 0.25
PDLIM2-201ENST00000265810 MAGEC2Q9UBF1 373 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-201ENST00000265810 PLEKHG2Q9H7P9 1386 aa16.61■□□□□ 0.25
PDLIM2-201ENST00000265810 CHRNA5P30532 468 aa16.61■□□□□ 0.25
PDLIM2-201ENST00000265810 ZYXQ15942 572 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-201ENST00000265810 FILIP1LQ4L180 1135 aa16.61■□□□□ 0.25
PDLIM2-201ENST00000265810 CLIP2Q9UDT6 1046 aa16.61■□□□□ 0.25
PDLIM2-201ENST00000265810 PKP1Q13835 747 aa16.61■□□□□ 0.25
PDLIM2-201ENST00000265810 KLHL10Q6JEL2 608 aa16.61■□□□□ 0.25
PDLIM2-201ENST00000265810 PFKFB2O60825 505 aa16.61■□□□□ 0.25
PDLIM2-201ENST00000265810 PDIA3P30101 505 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-201ENST00000265810 SYKP43405 635 aa16.61■□□□□ 0.25
PDLIM2-201ENST00000265810 ZSCAN23Q3MJ62 389 aa16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 ISM2Q6H9L7 571 aa16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 MED23Q9ULK4 1368 aa16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 GYS1P13807 737 aa16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 EPS15P42566 896 aa16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 MRPS27Q92552 414 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 IPO7O95373 1038 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 GNA11P29992 359 aa16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 CCDC173Q0VFZ6 552 aa16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 DALRD3Q5D0E6 543 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 DIS3L2Q8IYB7 885 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 BRPF3Q9ULD4 1205 aa16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 H7C1D1 291 aa16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 USP17L8P0C7I0 530 aa16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 TNIP1Q15025 636 aa16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 PPP2R5BQ15173 497 aa16.6■□□□□ 0.25
PDLIM2-201ENST00000265810 ARID4AP29374 1257 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 NF2P35240 595 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 FANCBQ8NB91 859 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 BMP15O95972 392 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 SLC1A4P43007 532 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 CASP7P55210 303 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 KRT40Q6A162 431 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 EHMT1Q9H9B1 1298 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 CLRN2A0PK11 232 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 SCRN1Q12765 414 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 TRAF1Q13077 416 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 PRKG1Q13976 671 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 SP8Q8IXZ3 490 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 PIM2Q9P1W9 311 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 KCNJ14Q9UNX9 436 aa16.59■□□□□ 0.25
PDLIM2-201ENST00000265810 BRD1O95696 1058 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms