RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 IFIT3O14879 490 aaKnown RBP11.72□□□□□ -0.53
SEC22C-201ENST00000264454 KDM4AO75164 1064 aa11.72□□□□□ -0.53
SEC22C-201ENST00000264454 CDKL5O76039 1030 aa11.72□□□□□ -0.53
SEC22C-201ENST00000264454 NCLP19338 710 aaKnown RBP11.72□□□□□ -0.53
SEC22C-201ENST00000264454 PPP2R5BQ15173 497 aa11.72□□□□□ -0.53
SEC22C-201ENST00000264454 TMEM67Q5HYA8 995 aa11.72□□□□□ -0.53
SEC22C-201ENST00000264454 MFSD14BQ5SR56 506 aa11.72□□□□□ -0.53
SEC22C-201ENST00000264454 DCAF8Q5TAQ9 597 aa11.72□□□□□ -0.53
SEC22C-201ENST00000264454 CTR9Q6PD62 1173 aa11.72□□□□□ -0.53
SEC22C-201ENST00000264454 PODNQ7Z5L7 613 aa11.72□□□□□ -0.53
SEC22C-201ENST00000264454 ZSCAN16Q9H4T2 348 aaPredicted RBP11.72□□□□□ -0.53
SEC22C-201ENST00000264454 DDX49Q9Y6V7 483 aaKnown RBP11.72□□□□□ -0.53
SEC22C-201ENST00000264454 GPR75-ASB3A0A0A6YYF3 556 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 PTPDC1A2A3K4 754 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 VPS37CA5D8V6 355 aaPredicted RBP11.71□□□□□ -0.53
SEC22C-201ENST00000264454 CCDC69A6NI79 296 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 GOLGA8BA8MQT2 603 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 USP17L12C9JPN9 530 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 USP17L21D6R901 530 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 H3BQV1 296 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 CPLX1O14810 134 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 ORC4O43929 436 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 MBD3O95983 291 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 FKBP1AP62942 108 aaKnown RBP11.71□□□□□ -0.53
SEC22C-201ENST00000264454 CCT2P78371 535 aaKnown RBP11.71□□□□□ -0.53
SEC22C-201ENST00000264454 PDE4BQ07343 736 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 FOXD4L5Q5VV16 416 aaPredicted RBP11.71□□□□□ -0.53
SEC22C-201ENST00000264454 NFXL1Q6ZNB6 911 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 TMEM87AQ8NBN3 555 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 SUPT20HQ8NEM7 779 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 FOXD4L4Q8WXT5 416 aaPredicted RBP11.71□□□□□ -0.53
SEC22C-201ENST00000264454 GPR101Q96P66 508 aaPredicted RBP11.71□□□□□ -0.53
SEC22C-201ENST00000264454 RTFDC1Q9BY42 306 aaPredicted RBP11.71□□□□□ -0.53
SEC22C-201ENST00000264454 LY9Q9HBG7 655 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 TOMM22Q9NS69 142 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 BRPF3Q9ULD4 1205 aa11.71□□□□□ -0.53
SEC22C-201ENST00000264454 CCDC196A0A1B0GTZ2 297 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 RIMBP2O15034 1052 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 ZBTB43O43298 467 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 JAK2O60674 1132 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 PRPF40AO75400 957 aaKnown RBP11.7□□□□□ -0.54
SEC22C-201ENST00000264454 CTDNEP1O95476 244 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 USP5P45974 858 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 METAP2P50579 478 aaKnown RBP eCLIP11.7□□□□□ -0.54
SEC22C-201ENST00000264454 GTF2IP78347 998 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 WTAPQ15007 396 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 RRP12Q5JTH9 1297 aaKnown RBP11.7□□□□□ -0.54
SEC22C-201ENST00000264454 APOA5Q6Q788 366 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 IQCA1Q86XH1 822 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 UBAC1Q9BSL1 405 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 ZNF287Q9HBT7 754 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 HPS5Q9UPZ3 1129 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 JAG2Q9Y219 1238 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 SLC12A7Q9Y666 1083 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 GAKO14976 1311 aa11.7□□□□□ -0.54
SEC22C-201ENST00000264454 CCDC178Q5BJE1 867 aa11.69□□□□□ -0.54
SEC22C-201ENST00000264454 ATL3Q6DD88 541 aa11.69□□□□□ -0.54
SEC22C-201ENST00000264454 SLC51AQ86UW1 340 aa11.69□□□□□ -0.54
SEC22C-201ENST00000264454 MRIQ9BWK5 157 aa11.69□□□□□ -0.54
SEC22C-201ENST00000264454 GPHNQ9NQX3 736 aaPredicted RBP11.69□□□□□ -0.54
SEC22C-201ENST00000264454 MKRN1Q9UHC7 482 aaKnown RBP11.69□□□□□ -0.54
SEC22C-201ENST00000264454 ISY1Q9ULR0 285 aaKnown RBP11.69□□□□□ -0.54
SEC22C-201ENST00000264454 COL11A2P13942 1736 aaPredicted RBP11.69□□□□□ -0.54
SEC22C-201ENST00000264454 NID2Q14112 1375 aa11.69□□□□□ -0.54
SEC22C-201ENST00000264454 BTDP43251 543 aa11.68□□□□□ -0.54
SEC22C-201ENST00000264454 KRT85P78386 507 aa11.68□□□□□ -0.54
SEC22C-201ENST00000264454 C12orf60Q5U649 245 aa11.68□□□□□ -0.54
SEC22C-201ENST00000264454 C7orf43Q8WVR3 580 aa11.68□□□□□ -0.54
SEC22C-201ENST00000264454 DDX11Q96FC9 970 aa11.68□□□□□ -0.54
SEC22C-201ENST00000264454 NCOA5Q9HCD5 579 aaKnown RBP11.68□□□□□ -0.54
SEC22C-201ENST00000264454 INCENPQ9NQS7 918 aa11.68□□□□□ -0.54
SEC22C-201ENST00000264454 MCM9Q9NXL9 1143 aa11.68□□□□□ -0.54
SEC22C-201ENST00000264454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.68□□□□□ -0.54
SEC22C-201ENST00000264454 TACC3Q9Y6A5 838 aa11.68□□□□□ -0.54
SEC22C-201ENST00000264454 GOLGA8AA7E2F4 631 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 CALM1P0DP23 149 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 CALM2P0DP24 149 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 CALM3P0DP25 149 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 DEKP35659 375 aaKnown RBP11.67□□□□□ -0.54
SEC22C-201ENST00000264454 DIXDC1Q155Q3 683 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 GRIK5Q16478 980 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 STRIP1Q5VSL9 837 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 HHIPL2Q6UWX4 724 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 RTKN2Q8IZC4 609 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 TTLL6Q8N841 843 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 SH3RF3Q8TEJ3 882 aaPredicted RBP11.67□□□□□ -0.54
SEC22C-201ENST00000264454 WASF1Q92558 559 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 ZSCAN10Q96SZ4 725 aaPredicted RBP11.67□□□□□ -0.54
SEC22C-201ENST00000264454 SCAND2PQ9GZW5 306 aaPredicted RBP11.67□□□□□ -0.54
SEC22C-201ENST00000264454 VPS33BQ9H267 617 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
SEC22C-201ENST00000264454 C10orf71Q711Q0 1435 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 CHD4Q14839 1912 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 ROBO3Q96MS0 1386 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 RANBP6O60518 1105 aaKnown RBP11.67□□□□□ -0.54
SEC22C-201ENST00000264454 CHRNA5P30532 468 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 HDLBPQ00341 1268 aaKnown RBP11.67□□□□□ -0.54
SEC22C-201ENST00000264454 SEC23AQ15436 765 aa11.67□□□□□ -0.54
SEC22C-201ENST00000264454 USP48Q86UV5 1035 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms