RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 FLT1P17948 1338 aa22.09■■□□□ 1.13
SDF4-201ENST00000263741 A0A0D9SFI3 127 aa22.09■■□□□ 1.13
SDF4-201ENST00000263741 PRKAB2O43741 272 aa22.09■■□□□ 1.13
SDF4-201ENST00000263741 ZFYP08048 801 aaPredicted RBP22.09■■□□□ 1.13
SDF4-201ENST00000263741 PLCG2P16885 1265 aa22.09■■□□□ 1.13
SDF4-201ENST00000263741 HTRA3P83110 453 aa22.09■■□□□ 1.13
SDF4-201ENST00000263741 PRKG1Q13976 671 aa22.09■■□□□ 1.13
SDF4-201ENST00000263741 CST9Q5W186 159 aa22.09■■□□□ 1.13
SDF4-201ENST00000263741 CCDC129Q6ZRS4 1044 aa22.09■■□□□ 1.13
SDF4-201ENST00000263741 AIDAQ96BJ3 306 aa22.09■■□□□ 1.13
SDF4-201ENST00000263741 SLURP2P0DP57 97 aa22.08■■□□□ 1.13
SDF4-201ENST00000263741 ZMYM1Q5SVZ6 1142 aa22.08■■□□□ 1.13
SDF4-201ENST00000263741 FKBP1CQ5VVH2 108 aa22.08■■□□□ 1.13
SDF4-201ENST00000263741 FAM83AQ86UY5 434 aa22.08■■□□□ 1.13
SDF4-201ENST00000263741 NMIQ13287 307 aaPredicted RBP22.08■■□□□ 1.12
SDF4-201ENST00000263741 MOB2Q70IA6 237 aa22.08■■□□□ 1.12
SDF4-201ENST00000263741 SH3BP5LQ7L8J4 393 aa22.08■■□□□ 1.12
SDF4-201ENST00000263741 SAP30BPQ9UHR5 308 aaKnown RBP22.08■■□□□ 1.12
SDF4-201ENST00000263741 PAPPA2Q9BXP8 1791 aa22.08■■□□□ 1.12
SDF4-201ENST00000263741 USP5P45974 858 aa22.07■■□□□ 1.12
SDF4-201ENST00000263741 TMED8Q6PL24 325 aaPredicted RBP22.07■■□□□ 1.12
SDF4-201ENST00000263741 ZSCAN29Q8IWY8 852 aaPredicted RBP22.07■■□□□ 1.12
SDF4-201ENST00000263741 FAM151AQ8WW52 585 aa22.07■■□□□ 1.12
SDF4-201ENST00000263741 PPP2R3BQ9Y5P8 575 aa22.07■■□□□ 1.12
SDF4-201ENST00000263741 LAMB1P07942 1786 aa22.07■■□□□ 1.12
SDF4-201ENST00000263741 DDTLA6NHG4 134 aaPredicted RBP22.07■■□□□ 1.12
SDF4-201ENST00000263741 GPAA1O43292 621 aa22.07■■□□□ 1.12
SDF4-201ENST00000263741 LRRFIP1Q32MZ4 808 aaKnown RBP22.07■■□□□ 1.12
SDF4-201ENST00000263741 OSBPL5Q9H0X9 879 aaPredicted RBP22.07■■□□□ 1.12
SDF4-201ENST00000263741 CRNKL1Q9BZJ0 848 aaKnown RBP22.06■■□□□ 1.12
SDF4-201ENST00000263741 MYH8P13535 1937 aa22.06■■□□□ 1.12
SDF4-201ENST00000263741 RPAP1Q9BWH6 1393 aaPredicted RBP22.06■■□□□ 1.12
SDF4-201ENST00000263741 ENTPD3O75355 529 aa22.05■■□□□ 1.12
SDF4-201ENST00000263741 APLP1P51693 650 aa22.05■■□□□ 1.12
SDF4-201ENST00000263741 STRBPQ96SI9 672 aaKnown RBP22.05■■□□□ 1.12
SDF4-201ENST00000263741 CEP350Q5VT06 3117 aa22.05■■□□□ 1.12
SDF4-201ENST00000263741 EVX2Q03828 476 aa22.04■■□□□ 1.12
SDF4-201ENST00000263741 CWC27Q6UX04 472 aaKnown RBP22.04■■□□□ 1.12
SDF4-201ENST00000263741 CSRNP1Q96S65 589 aa22.04■■□□□ 1.12
SDF4-201ENST00000263741 DIAPH3Q9NSV4 1193 aa22.04■■□□□ 1.12
SDF4-201ENST00000263741 PALD1Q9ULE6 856 aa22.04■■□□□ 1.12
SDF4-201ENST00000263741 SLC4A4Q9Y6R1 1079 aa22.04■■□□□ 1.12
SDF4-201ENST00000263741 ATAD5Q96QE3 1844 aa22.03■■□□□ 1.12
SDF4-201ENST00000263741 FAM196BA6NMK8 535 aa22.03■■□□□ 1.12
SDF4-201ENST00000263741 TTLL12Q14166 644 aaPredicted RBP22.03■■□□□ 1.12
SDF4-201ENST00000263741 MIGA2Q7L4E1 593 aa22.03■■□□□ 1.12
SDF4-201ENST00000263741 ZNF589Q86UQ0 364 aaPredicted RBP22.03■■□□□ 1.12
SDF4-201ENST00000263741 IL25Q9H293 177 aa22.03■■□□□ 1.12
SDF4-201ENST00000263741 GBA2Q9HCG7 927 aaPredicted RBP22.03■■□□□ 1.12
SDF4-201ENST00000263741 NF2P35240 595 aa22.02■■□□□ 1.12
SDF4-201ENST00000263741 BMP2KLQ5H9B9 411 aa22.02■■□□□ 1.12
SDF4-201ENST00000263741 CERS3Q8IU89 383 aa22.02■■□□□ 1.12
SDF4-201ENST00000263741 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.02■■□□□ 1.12
SDF4-201ENST00000263741 ATRNL1Q5VV63 1379 aa22.02■■□□□ 1.12
SDF4-201ENST00000263741 TMEM88BA6NKF7 163 aa22.02■■□□□ 1.11
SDF4-201ENST00000263741 DCP1AQ9NPI6 582 aaPredicted RBP22.02■■□□□ 1.11
SDF4-201ENST00000263741 ABT1Q9ULW3 272 aaKnown RBP22.02■■□□□ 1.11
SDF4-201ENST00000263741 COL2A1P02458 1487 aaPredicted RBP22.02■■□□□ 1.11
SDF4-201ENST00000263741 HSPA6P17066 643 aa22.01■■□□□ 1.11
SDF4-201ENST00000263741 SUPT20HL1Q3ZLR7 823 aa22.01■■□□□ 1.11
SDF4-201ENST00000263741 VPS53Q5VIR6 699 aa22.01■■□□□ 1.11
SDF4-201ENST00000263741 MKRN1Q9UHC7 482 aaKnown RBP22.01■■□□□ 1.11
SDF4-201ENST00000263741 SMIM22K7EJ46 135 aa22■■□□□ 1.11
SDF4-201ENST00000263741 NPM3O75607 178 aaKnown RBP22■■□□□ 1.11
SDF4-201ENST00000263741 CYP2D6P10635 497 aa22■■□□□ 1.11
SDF4-201ENST00000263741 EPB41L4AQ9HCS5 686 aaPredicted RBP22■■□□□ 1.11
SDF4-201ENST00000263741 HELLSQ9NRZ9 838 aa22■■□□□ 1.11
SDF4-201ENST00000263741 ANGEL1Q9UNK9 670 aaKnown RBP22■■□□□ 1.11
SDF4-201ENST00000263741 CYP2D7A0A087X1C5 515 aa22■■□□□ 1.11
SDF4-201ENST00000263741 MCMDC2Q4G0Z9 681 aa22■■□□□ 1.11
SDF4-201ENST00000263741 MCM9Q9NXL9 1143 aa22■■□□□ 1.11
SDF4-201ENST00000263741 GSG1L2A8MUP6 293 aa21.99■■□□□ 1.11
SDF4-201ENST00000263741 UBE2Q2LH0YL09 131 aa21.99■■□□□ 1.11
SDF4-201ENST00000263741 FOXP2O15409 715 aa21.99■■□□□ 1.11
SDF4-201ENST00000263741 CHMLP26374 656 aa21.99■■□□□ 1.11
SDF4-201ENST00000263741 DOCK1Q14185 1865 aa21.99■■□□□ 1.11
SDF4-201ENST00000263741 APPP05067 770 aa21.99■■□□□ 1.11
SDF4-201ENST00000263741 C2orf69Q8N8R5 385 aa21.99■■□□□ 1.11
SDF4-201ENST00000263741 CCDC171Q6TFL3 1326 aa21.98■■□□□ 1.11
SDF4-201ENST00000263741 CREBZFQ9NS37 354 aa21.98■■□□□ 1.11
SDF4-201ENST00000263741 USP2O75604 605 aaPredicted RBP21.97■■□□□ 1.11
SDF4-201ENST00000263741 PLCD1P51178 756 aa21.97■■□□□ 1.11
SDF4-201ENST00000263741 HUNKP57058 714 aa21.97■■□□□ 1.11
SDF4-201ENST00000263741 SAPCD2Q86UD0 394 aa21.97■■□□□ 1.11
SDF4-201ENST00000263741 LAMA4Q16363 1823 aa21.97■■□□□ 1.11
SDF4-201ENST00000263741 HIP1O00291 1037 aa21.97■■□□□ 1.11
SDF4-201ENST00000263741 ATP8A2Q9NTI2 1148 aa21.97■■□□□ 1.11
SDF4-201ENST00000263741 TLL2Q9Y6L7 1015 aa21.97■■□□□ 1.11
SDF4-201ENST00000263741 PPP1R12BO60237 982 aaPredicted RBP21.96■■□□□ 1.11
SDF4-201ENST00000263741 POLR3DP05423 398 aaPredicted RBP21.96■■□□□ 1.11
SDF4-201ENST00000263741 CLMNQ96JQ2 1002 aa21.96■■□□□ 1.11
SDF4-201ENST00000263741 PCNTO95613 3336 aa21.96■■□□□ 1.11
SDF4-201ENST00000263741 USP17L12C9JPN9 530 aa21.95■■□□□ 1.11
SDF4-201ENST00000263741 USP17L21D6R901 530 aa21.95■■□□□ 1.11
SDF4-201ENST00000263741 DNAJC18Q9H819 358 aa21.95■■□□□ 1.11
SDF4-201ENST00000263741 TDO2P48775 406 aa21.95■■□□□ 1.1
SDF4-201ENST00000263741 ARMC9Q7Z3E5 817 aa21.95■■□□□ 1.1
SDF4-201ENST00000263741 TICAM2Q86XR7 235 aa21.95■■□□□ 1.1
SDF4-201ENST00000263741 STK11IPQ8N1F8 1099 aa21.95■■□□□ 1.1
SDF4-201ENST00000263741 WRNIP1Q96S55 665 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms