RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 NR1I2O75469 434 aa13.51□□□□□ -0.25
SMG6-201ENST00000263073 NLRP12P59046 1061 aa13.51□□□□□ -0.25
SMG6-201ENST00000263073 FERMT1Q9BQL6 677 aa13.51□□□□□ -0.25
SMG6-201ENST00000263073 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMG6-201ENST00000263073 BAIAP2L1Q9UHR4 511 aa13.51□□□□□ -0.25
SMG6-201ENST00000263073 NFE2L3Q9Y4A8 694 aa13.51□□□□□ -0.25
SMG6-201ENST00000263073 CEP104O60308 925 aa13.51□□□□□ -0.25
SMG6-201ENST00000263073 GABPB1Q06547 395 aaPredicted RBP13.51□□□□□ -0.25
SMG6-201ENST00000263073 CMTR1Q8N1G2 835 aaKnown RBP13.51□□□□□ -0.25
SMG6-201ENST00000263073 RAB3IL1Q8TBN0 382 aa13.51□□□□□ -0.25
SMG6-201ENST00000263073 SEC31AO94979 1220 aaKnown RBP13.51□□□□□ -0.25
SMG6-201ENST00000263073 CSGALNACT2Q8N6G5 542 aa13.51□□□□□ -0.25
SMG6-201ENST00000263073 PPIP5K1Q6PFW1 1433 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 CD109Q6YHK3 1445 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 ADAMTS12P58397 1594 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 MRPS9P82933 396 aaKnown RBP13.5□□□□□ -0.25
SMG6-201ENST00000263073 GKAP1Q5VSY0 366 aaPredicted RBP13.5□□□□□ -0.25
SMG6-201ENST00000263073 PYCARDQ9ULZ3 195 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 RTL9Q8NET4 1388 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 NDC80O14777 642 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 ALDH1L1O75891 902 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 RASA3Q14644 834 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 CCDC26Q8TAB7 109 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 ZNF215Q9UL58 517 aaPredicted RBP13.5□□□□□ -0.25
SMG6-201ENST00000263073 HSPA1LP34931 641 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 PPFIBP2Q8ND30 876 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 CABLES1Q8TDN4 633 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 GPCPD1Q9NPB8 672 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 UTP11Q9Y3A2 253 aaKnown RBP13.5□□□□□ -0.25
SMG6-201ENST00000263073 V9GY48 417 aaPredicted RBP13.5□□□□□ -0.25
SMG6-201ENST00000263073 A0A087WWV3 80 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 TRIM68Q6AZZ1 485 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 SV2BQ7L1I2 683 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 DBNDD2Q9BQY9 259 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 CPSF2Q9P2I0 782 aaKnown RBP13.5□□□□□ -0.25
SMG6-201ENST00000263073 NRBP1Q9UHY1 535 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 CAPN7Q9Y6W3 813 aa13.5□□□□□ -0.25
SMG6-201ENST00000263073 WDR62O43379 1518 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 TXKP42681 527 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 FMNL3Q8IVF7 1028 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 DDX12PQ92771 950 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 EDC3Q96F86 508 aaKnown RBP13.49□□□□□ -0.25
SMG6-201ENST00000263073 TTF2Q9UNY4 1162 aaKnown RBP13.49□□□□□ -0.25
SMG6-201ENST00000263073 NIP7Q9Y221 180 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMG6-201ENST00000263073 LIG3P49916 1009 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 TYW1BQ6NUM6 668 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 CABS1Q96KC9 395 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 DDX21Q9NR30 783 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMG6-201ENST00000263073 ANAPC4Q9UJX5 808 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 A0A1B0GUA9 196 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 NEDD9Q14511 834 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 ANKRD42Q8N9B4 389 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 SPDYE3A6NKU9 549 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 RIMBP2O15034 1052 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 CIB2O75838 187 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 ATP6V1AP38606 617 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 POGZQ7Z3K3 1410 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 TXNDC9O14530 226 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 PAK1Q13153 545 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 TXNDC16Q9P2K2 825 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 PBRM1Q86U86 1689 aa13.49□□□□□ -0.25
SMG6-201ENST00000263073 PPP2R5DQ14738 602 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 ASIC2Q16515 512 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 ME3Q16798 604 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 NELFCDQ8IXH7 590 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 EIF4G3O43432 1585 aaKnown RBP13.48□□□□□ -0.25
SMG6-201ENST00000263073 CA8P35219 290 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 MIPOL1Q8TD10 442 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.48□□□□□ -0.25
SMG6-201ENST00000263073 MTUS1Q9ULD2 1270 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 RAPGEF6Q8TEU7 1601 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 RFC4P35249 363 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 GNGT1P63211 74 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 GSTO1P78417 241 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 IFT20Q8IY31 132 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 FEZ2Q9UHY8 353 aaPredicted RBP13.48□□□□□ -0.25
SMG6-201ENST00000263073 AGTPBP1Q9UPW5 1226 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 USTQ9Y2C2 406 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.48□□□□□ -0.25
SMG6-201ENST00000263073 TNFAIP3P21580 790 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 MAP3K9P80192 1104 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 UHMK1Q8TAS1 419 aaKnown RBP13.48□□□□□ -0.25
SMG6-201ENST00000263073 PABPN1LA6NDY0 278 aaKnown RBP13.48□□□□□ -0.25
SMG6-201ENST00000263073 CALML3P27482 149 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 ZNF827Q17R98 1081 aa13.48□□□□□ -0.25
SMG6-201ENST00000263073 PROCA1Q8NCQ7 364 aaPredicted RBP13.48□□□□□ -0.25
SMG6-201ENST00000263073 SARNPP82979 210 aaKnown RBP13.47□□□□□ -0.25
SMG6-201ENST00000263073 PAXIP1Q6ZW49 1069 aaPredicted RBP13.47□□□□□ -0.25
SMG6-201ENST00000263073 DIS3L2Q8IYB7 885 aaKnown RBP13.47□□□□□ -0.25
SMG6-201ENST00000263073 NELFBQ8WX92 580 aa13.47□□□□□ -0.25
SMG6-201ENST00000263073 FAM207AQ9NSI2 230 aaPredicted RBP13.47□□□□□ -0.25
SMG6-201ENST00000263073 PALD1Q9ULE6 856 aa13.47□□□□□ -0.25
SMG6-201ENST00000263073 FAM169AQ9Y6X4 670 aa13.47□□□□□ -0.25
SMG6-201ENST00000263073 NOL3O60936 208 aaKnown RBP13.47□□□□□ -0.25
SMG6-201ENST00000263073 POSTNQ15063 836 aa13.47□□□□□ -0.25
SMG6-201ENST00000263073 HS2ST1Q7LGA3 356 aa13.47□□□□□ -0.25
SMG6-201ENST00000263073 VSIG1Q86XK7 387 aa13.47□□□□□ -0.25
SMG6-201ENST00000263073 RPUSD2Q8IZ73 545 aaKnown RBP13.47□□□□□ -0.25
SMG6-201ENST00000263073 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
SMG6-201ENST00000263073 PDE1CQ14123 709 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms