RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 C19orf44Q9H6X5 657 aa20.03■□□□□ 0.8
TRAM1-201ENST00000262213 PPP2R3AQ06190 1150 aa20.03■□□□□ 0.8
TRAM1-201ENST00000262213 METTL24Q5JXM2 366 aa20.03■□□□□ 0.8
TRAM1-201ENST00000262213 SRRTQ9BXP5 876 aaKnown RBP20.03■□□□□ 0.8
TRAM1-201ENST00000262213 IRX2Q9BZI1 471 aaPredicted RBP20.03■□□□□ 0.8
TRAM1-201ENST00000262213 KCNJ14Q9UNX9 436 aa20.03■□□□□ 0.8
TRAM1-201ENST00000262213 CUTAO60888 179 aa20.02■□□□□ 0.8
TRAM1-201ENST00000262213 HNRNPH2P55795 449 aaKnown RBP20.02■□□□□ 0.8
TRAM1-201ENST00000262213 MTF1Q14872 753 aa20.02■□□□□ 0.8
TRAM1-201ENST00000262213 BTBD18B2RXH4 712 aa20.02■□□□□ 0.8
TRAM1-201ENST00000262213 POLR2DO15514 142 aaKnown RBP20.02■□□□□ 0.8
TRAM1-201ENST00000262213 TMEM67Q5HYA8 995 aa20.02■□□□□ 0.8
TRAM1-201ENST00000262213 CMTR1Q8N1G2 835 aaKnown RBP20.02■□□□□ 0.8
TRAM1-201ENST00000262213 CALCOCO1Q9P1Z2 691 aa20.02■□□□□ 0.8
TRAM1-201ENST00000262213 SERTAD1Q9UHV2 236 aa20.02■□□□□ 0.8
TRAM1-201ENST00000262213 MAN1B1Q9UKM7 699 aa20.02■□□□□ 0.8
TRAM1-201ENST00000262213 OAS2P29728 719 aaKnown RBP20.01■□□□□ 0.79
TRAM1-201ENST00000262213 GYS2P54840 703 aa20.01■□□□□ 0.79
TRAM1-201ENST00000262213 ST5P78524 1137 aa20.01■□□□□ 0.79
TRAM1-201ENST00000262213 CPLX3Q8WVH0 158 aa20.01■□□□□ 0.79
TRAM1-201ENST00000262213 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.01■□□□□ 0.79
TRAM1-201ENST00000262213 TOMM22Q9NS69 142 aa20.01■□□□□ 0.79
TRAM1-201ENST00000262213 UBN2Q6ZU65 1347 aa20.01■□□□□ 0.79
TRAM1-201ENST00000262213 IFIT5Q13325 482 aaKnown RBP20.01■□□□□ 0.79
TRAM1-201ENST00000262213 KRI1Q8N9T8 703 aaKnown RBP20.01■□□□□ 0.79
TRAM1-201ENST00000262213 DHX58Q96C10 678 aa20.01■□□□□ 0.79
TRAM1-201ENST00000262213 SAMSN1Q9NSI8 373 aaKnown RBP20.01■□□□□ 0.79
TRAM1-201ENST00000262213 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.01■□□□□ 0.79
TRAM1-201ENST00000262213 GUCY1A2P33402 732 aa20■□□□□ 0.79
TRAM1-201ENST00000262213 IRX5P78411 483 aaPredicted RBP20■□□□□ 0.79
TRAM1-201ENST00000262213 CTDSPL2Q05D32 466 aa20■□□□□ 0.79
TRAM1-201ENST00000262213 CC2D1AQ6P1N0 951 aaPredicted RBP20■□□□□ 0.79
TRAM1-201ENST00000262213 TC2NQ8N9U0 490 aa20■□□□□ 0.79
TRAM1-201ENST00000262213 CCDC12Q8WUD4 166 aaPredicted RBP20■□□□□ 0.79
TRAM1-201ENST00000262213 LZTFL1Q9NQ48 299 aa20■□□□□ 0.79
TRAM1-201ENST00000262213 PIH1D3Q9NQM4 214 aaKnown RBP20■□□□□ 0.79
TRAM1-201ENST00000262213 TBC1D8O95759 1140 aa20■□□□□ 0.79
TRAM1-201ENST00000262213 MAPK8IP2Q13387 824 aaPredicted RBP20■□□□□ 0.79
TRAM1-201ENST00000262213 RRP12Q5JTH9 1297 aaKnown RBP20■□□□□ 0.79
TRAM1-201ENST00000262213 BBXQ8WY36 941 aaPredicted RBP20■□□□□ 0.79
TRAM1-201ENST00000262213 MPHOSPH8Q99549 860 aa20■□□□□ 0.79
TRAM1-201ENST00000262213 ZKSCAN3Q9BRR0 538 aa20■□□□□ 0.79
TRAM1-201ENST00000262213 C4AP0C0L4 1744 aa20■□□□□ 0.79
TRAM1-201ENST00000262213 C4BP0C0L5 1744 aa20■□□□□ 0.79
TRAM1-201ENST00000262213 POSTNQ15063 836 aa20■□□□□ 0.79
TRAM1-201ENST00000262213 SPECC1LQ69YQ0 1117 aa20■□□□□ 0.79
TRAM1-201ENST00000262213 GPTP24298 496 aa19.99■□□□□ 0.79
TRAM1-201ENST00000262213 ADD2P35612 726 aa19.99■□□□□ 0.79
TRAM1-201ENST00000262213 SSRP1Q08945 709 aaKnown RBP19.99■□□□□ 0.79
TRAM1-201ENST00000262213 TICAM2Q86XR7 235 aa19.99■□□□□ 0.79
TRAM1-201ENST00000262213 PARD6BQ9BYG5 372 aa19.99■□□□□ 0.79
TRAM1-201ENST00000262213 ATG3Q9NT62 314 aa19.99■□□□□ 0.79
TRAM1-201ENST00000262213 KIF1AQ12756 1690 aa19.99■□□□□ 0.79
TRAM1-201ENST00000262213 ZNF532Q9HCE3 1301 aa19.99■□□□□ 0.79
TRAM1-201ENST00000262213 IFIT3O14879 490 aaKnown RBP19.99■□□□□ 0.79
TRAM1-201ENST00000262213 MAP3K9P80192 1104 aa19.99■□□□□ 0.79
TRAM1-201ENST00000262213 KLHL10Q6JEL2 608 aa19.99■□□□□ 0.79
TRAM1-201ENST00000262213 LDHAL6AQ6ZMR3 332 aa19.99■□□□□ 0.79
TRAM1-201ENST00000262213 TJP1Q07157 1748 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 A0A0U1RQJ8 604 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 NTRK3Q16288 839 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 FCHSD1Q86WN1 690 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 ATRIPQ8WXE1 791 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 SMARCE1Q969G3 411 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 FAM217BQ9NTX9 383 aaPredicted RBP19.98■□□□□ 0.79
TRAM1-201ENST00000262213 SLC12A7Q9Y666 1083 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 SOWAHDA6NJG2 315 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 TPM1P09493 284 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 STX17P56962 302 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 TBX2Q13207 712 aaPredicted RBP19.98■□□□□ 0.79
TRAM1-201ENST00000262213 SMC1AQ14683 1233 aaKnown RBP19.98■□□□□ 0.79
TRAM1-201ENST00000262213 MRPL44Q9H9J2 332 aaKnown RBP19.98■□□□□ 0.79
TRAM1-201ENST00000262213 CNNM1Q9NRU3 951 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 TMEM51Q9NW97 253 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 WWC3Q9ULE0 1092 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 MRFAP1Q9Y605 127 aa19.98■□□□□ 0.79
TRAM1-201ENST00000262213 KDM4FA0A1W2PPD8 638 aa19.97■□□□□ 0.79
TRAM1-201ENST00000262213 USP49Q70CQ1 688 aa19.97■□□□□ 0.79
TRAM1-201ENST00000262213 NOSTRINQ8IVI9 506 aa19.97■□□□□ 0.79
TRAM1-201ENST00000262213 DIS3L2Q8IYB7 885 aaKnown RBP19.97■□□□□ 0.79
TRAM1-201ENST00000262213 IGDCC4Q8TDY8 1250 aa19.97■□□□□ 0.79
TRAM1-201ENST00000262213 LY9Q9HBG7 655 aa19.97■□□□□ 0.79
TRAM1-201ENST00000262213 SEC31BQ9NQW1 1179 aa19.97■□□□□ 0.79
TRAM1-201ENST00000262213 PUF60Q9UHX1 559 aaKnown RBP19.97■□□□□ 0.79
TRAM1-201ENST00000262213 LMTK3Q96Q04 1460 aa19.97■□□□□ 0.79
TRAM1-201ENST00000262213 ARFGAP3Q9NP61 516 aa19.97■□□□□ 0.79
TRAM1-201ENST00000262213 HOOK1Q9UJC3 728 aaKnown RBP19.97■□□□□ 0.79
TRAM1-201ENST00000262213 STX10O60499 249 aa19.96■□□□□ 0.79
TRAM1-201ENST00000262213 TOB1P50616 345 aaPredicted RBP19.96■□□□□ 0.79
TRAM1-201ENST00000262213 MDM2Q00987 491 aaPredicted RBP19.96■□□□□ 0.79
TRAM1-201ENST00000262213 NR5A1Q13285 461 aa19.96■□□□□ 0.79
TRAM1-201ENST00000262213 GPR161Q8N6U8 529 aaKnown RBP19.96■□□□□ 0.79
TRAM1-201ENST00000262213 AIDAQ96BJ3 306 aa19.96■□□□□ 0.79
TRAM1-201ENST00000262213 RAI14Q9P0K7 980 aa19.96■□□□□ 0.79
TRAM1-201ENST00000262213 PCDHB6Q9Y5E3 794 aa19.96■□□□□ 0.79
TRAM1-201ENST00000262213 SPEF2Q9C093 1822 aa19.96■□□□□ 0.79
TRAM1-201ENST00000262213 TRPM3Q9HCF6 1732 aaPredicted RBP19.96■□□□□ 0.79
TRAM1-201ENST00000262213 CASP1P29466 404 aa19.96■□□□□ 0.79
TRAM1-201ENST00000262213 TCIRG1Q13488 830 aa19.96■□□□□ 0.79
TRAM1-201ENST00000262213 HELBQ8NG08 1087 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms