RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 AMPHP49418 695 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 IRAK1P51617 712 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 GIMAP7Q8NHV1 300 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 BCAS4Q8TDM0 211 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 CDC5LQ99459 802 aaKnown RBP8.22□□□□□ -1.09
CSDE1-201ENST00000261443 CRACR2AQ9BSW2 395 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 NAA15Q9BXJ9 866 aaKnown RBP8.22□□□□□ -1.09
CSDE1-201ENST00000261443 AGXT2Q9BYV1 514 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 RABEP2Q9H5N1 569 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 MAP3K2Q9Y2U5 619 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 PCDHA5Q9Y5H7 936 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 IGSF1Q8N6C5 1336 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 H0YHG0 523 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 GGCXP38435 758 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 SATB1Q01826 763 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 SLC39A14Q15043 492 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 CWF19L2Q2TBE0 894 aaKnown RBP8.22□□□□□ -1.09
CSDE1-201ENST00000261443 CCDC102BQ68D86 513 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 METTL16Q86W50 562 aaKnown RBP8.22□□□□□ -1.09
CSDE1-201ENST00000261443 CNPY4Q8N129 248 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 CARD10Q9BWT7 1032 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 GJB4Q9NTQ9 266 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 NCAPD2Q15021 1401 aa8.21□□□□□ -1.09
CSDE1-201ENST00000261443 GOLGA6CA6NDK9 693 aa8.21□□□□□ -1.09
CSDE1-201ENST00000261443 GOLGA6DP0CG33 693 aa8.21□□□□□ -1.09
CSDE1-201ENST00000261443 MCM3P25205 808 aa8.21□□□□□ -1.09
CSDE1-201ENST00000261443 NCAPH2Q6IBW4 605 aa8.21□□□□□ -1.09
CSDE1-201ENST00000261443 SHC4Q6S5L8 630 aa8.21□□□□□ -1.09
CSDE1-201ENST00000261443 RASGRP2Q7LDG7 609 aa8.21□□□□□ -1.09
CSDE1-201ENST00000261443 FOXP4Q8IVH2 680 aaPredicted RBP8.21□□□□□ -1.09
CSDE1-201ENST00000261443 CABS1Q96KC9 395 aa8.21□□□□□ -1.09
CSDE1-201ENST00000261443 TEX13AQ9BXU3 409 aaPredicted RBP8.21□□□□□ -1.09
CSDE1-201ENST00000261443 GOLGA6AQ9NYA3 693 aa8.21□□□□□ -1.09
CSDE1-201ENST00000261443 MYO6Q9UM54 1294 aa8.21□□□□□ -1.09
CSDE1-201ENST00000261443 HPSEQ9Y251 543 aa8.21□□□□□ -1.09
CSDE1-201ENST00000261443 CAPN7Q9Y6W3 813 aa8.21□□□□□ -1.09
CSDE1-201ENST00000261443 KIF28PB7ZC32 967 aa8.21□□□□□ -1.1
CSDE1-201ENST00000261443 ZNF18P17022 549 aa8.21□□□□□ -1.1
CSDE1-201ENST00000261443 BMP6P22004 513 aa8.21□□□□□ -1.1
CSDE1-201ENST00000261443 LONRF3Q496Y0 759 aa8.21□□□□□ -1.1
CSDE1-201ENST00000261443 PLPPR3Q6T4P5 718 aa8.21□□□□□ -1.1
CSDE1-201ENST00000261443 NUTM2AQ8IVF1 878 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-201ENST00000261443 TRMT44Q8IYL2 757 aaKnown RBP8.21□□□□□ -1.1
CSDE1-201ENST00000261443 JMYQ8N9B5 988 aa8.21□□□□□ -1.1
CSDE1-201ENST00000261443 PRPF38AQ8NAV1 312 aaKnown RBP8.21□□□□□ -1.1
CSDE1-201ENST00000261443 COG1Q8WTW3 980 aa8.21□□□□□ -1.1
CSDE1-201ENST00000261443 SUCLG2Q96I99 432 aa8.21□□□□□ -1.1
CSDE1-201ENST00000261443 GDAP1L1Q96MZ0 367 aa8.21□□□□□ -1.1
CSDE1-201ENST00000261443 TTF2Q9UNY4 1162 aaKnown RBP8.21□□□□□ -1.1
CSDE1-201ENST00000261443 FLT4P35916 1363 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 FER1L4A9Z1Z3 1794 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 E7EWF7 191 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 ATP5JP18859 108 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 RDXP35241 583 aaKnown RBP8.2□□□□□ -1.1
CSDE1-201ENST00000261443 FMR1Q06787 632 aaKnown RBP eCLIP8.2□□□□□ -1.11e-6■□□□□ 9.8
CSDE1-201ENST00000261443 RBL2Q08999 1139 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 TRDNQ13061 729 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 NR1I3Q14994 352 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 KLHDC4Q8TBB5 520 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 CAPS2Q9BXY5 557 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 GNL3LQ9NVN8 582 aaKnown RBP8.2□□□□□ -1.1
CSDE1-201ENST00000261443 KCNG1Q9UIX4 513 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 USP14P54578 494 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 EIF4A1P60842 406 aaKnown RBP8.2□□□□□ -1.1
CSDE1-201ENST00000261443 KIF23Q02241 960 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-201ENST00000261443 PPFIA1Q13136 1202 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 TACO1Q9BSH4 297 aaKnown RBP8.2□□□□□ -1.1
CSDE1-201ENST00000261443 EHD4Q9H223 541 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 SAMSN1Q9NSI8 373 aaKnown RBP8.2□□□□□ -1.1
CSDE1-201ENST00000261443 DACH1Q9UI36 760 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 RGPD2P0DJD1 1756 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 ABL1P00519 1130 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 GNGT1P63211 74 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 CPLX2Q6PUV4 134 aaKnown RBP8.2□□□□□ -1.1
CSDE1-201ENST00000261443 DDX46Q7L014 1031 aaKnown RBP8.2□□□□□ -1.1
CSDE1-201ENST00000261443 ACRBPQ8NEB7 543 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 ENOX1Q8TC92 643 aaKnown RBP8.2□□□□□ -1.1
CSDE1-201ENST00000261443 STAG1Q8WVM7 1258 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 A1CFQ9NQ94 594 aaKnown RBP8.2□□□□□ -1.1
CSDE1-201ENST00000261443 TAOK2Q9UL54 1235 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 KCNH3Q9ULD8 1083 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 SAMM50Q9Y512 469 aa8.2□□□□□ -1.1
CSDE1-201ENST00000261443 GRM8O00222 908 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 CPLX1O14810 134 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 FOXN1O15353 648 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 TEX33O43247 280 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 PPP6R2O75170 966 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 KIAA0754O94854 1291 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 SCP2P22307 547 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 GPTP24298 496 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 RESP18Q5W5W9 173 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 OTUD6BQ8N6M0 293 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 MLKLQ8NB16 471 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 KAZALD1Q96I82 304 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 MAN1B1Q9UKM7 699 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 ZC3H4Q9UPT8 1303 aaKnown RBP8.19□□□□□ -1.1
CSDE1-201ENST00000261443 A0A0G2JLW4 131 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 A0A1B0GTH6 734 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 GOLGA6BA6NDN3 693 aa8.19□□□□□ -1.1
CSDE1-201ENST00000261443 MYO1FO00160 1098 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms