RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 CDKL5O76039 1030 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 EVX2Q03828 476 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 SSRP1Q08945 709 aaKnown RBP13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 WTAPQ15007 396 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 SLC51AQ86UW1 340 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 DHX40Q8IX18 779 aaKnown RBP13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 BTBD18B2RXH4 712 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 NPHP1O15259 732 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 CHAF1AQ13111 956 aaPredicted RBP13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 NTRK3Q16288 839 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 TBC1D9BQ66K14 1250 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 CEP57L1Q8IYX8 460 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 CACTINQ8WUQ7 758 aaKnown RBP13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 CDC5LQ99459 802 aaKnown RBP13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 CDCA7Q9BWT1 371 aaPredicted RBP13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 ZNF652Q9Y2D9 606 aa13.14□□□□□ -0.31
SLC3A1-201ENST00000260649 SPATA31A5Q5VU36 1347 aa13.13□□□□□ -0.31
SLC3A1-201ENST00000260649 SPATA31A7Q8IWB4 1347 aa13.13□□□□□ -0.31
SLC3A1-201ENST00000260649 ATRNO75882 1429 aa13.13□□□□□ -0.31
SLC3A1-201ENST00000260649 ERICH2A1L162 156 aa13.13□□□□□ -0.31
SLC3A1-201ENST00000260649 YEATS4O95619 227 aa13.13□□□□□ -0.31
SLC3A1-201ENST00000260649 SLC3A2P08195 630 aaKnown RBP13.13□□□□□ -0.31
SLC3A1-201ENST00000260649 C16orf45Q96MC5 204 aaPredicted RBP13.13□□□□□ -0.31
SLC3A1-201ENST00000260649 MYH15Q9Y2K3 1946 aa13.13□□□□□ -0.31
SLC3A1-201ENST00000260649 AXDND1Q5T1B0 1012 aaPredicted RBP13.13□□□□□ -0.31
SLC3A1-201ENST00000260649 MAGEB6P1A0A0J9YX57 407 aa13.12□□□□□ -0.31
SLC3A1-201ENST00000260649 PPARAQ07869 468 aa13.12□□□□□ -0.31
SLC3A1-201ENST00000260649 RTN1Q16799 776 aa13.12□□□□□ -0.31
SLC3A1-201ENST00000260649 NGLY1Q96IV0 654 aa13.12□□□□□ -0.31
SLC3A1-201ENST00000260649 AK7Q96M32 723 aa13.12□□□□□ -0.31
SLC3A1-201ENST00000260649 UBAC1Q9BSL1 405 aa13.12□□□□□ -0.31
SLC3A1-201ENST00000260649 KRT23Q9C075 422 aa13.12□□□□□ -0.31
SLC3A1-201ENST00000260649 KIAA1468Q9P260 1216 aa13.12□□□□□ -0.31
SLC3A1-201ENST00000260649 WDR19Q8NEZ3 1342 aa13.12□□□□□ -0.31
SLC3A1-201ENST00000260649 ALX1Q15699 326 aa13.12□□□□□ -0.31
SLC3A1-201ENST00000260649 PTPN21Q16825 1174 aa13.12□□□□□ -0.31
SLC3A1-201ENST00000260649 A0A1W2PQ27 194 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 A0A1W2PQ64 194 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 A0A1W2PQD8 194 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 SYKP43405 635 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 NR5A1Q13285 461 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 SART3Q15020 963 aaKnown RBP13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 SLC39A14Q15043 492 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 SMC2O95347 1197 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 PNOCQ13519 176 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 HSP90AA4PQ58FG1 418 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 SHC4Q6S5L8 630 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 CNNM2Q9H8M5 875 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 MINPP1Q9UNW1 487 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 THRAP3Q9Y2W1 955 aaKnown RBP13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 TPM3P06753 285 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 SGMS1Q86VZ5 419 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 DIS3L2Q8IYB7 885 aaKnown RBP13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
SLC3A1-201ENST00000260649 GRIN1Q05586 938 aa13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 OXER1Q8TDS5 423 aa13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 ZNF592Q92610 1267 aa13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 GNL3LQ9NVN8 582 aaKnown RBP13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 TNKSO95271 1327 aa13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 GNPATO15228 680 aa13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 FOXN1O15353 648 aa13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 LMOD1P29536 600 aaPredicted RBP13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 LIFRP42702 1097 aa13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 TRIM22Q8IYM9 498 aa13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 ZNF654Q8IZM8 581 aa13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 PDILTQ8N807 584 aa13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 STAG1Q8WVM7 1258 aa13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 SMARCC1Q92922 1105 aaPredicted RBP13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 FAM84BQ96KN1 310 aaPredicted RBP13.1□□□□□ -0.31
SLC3A1-201ENST00000260649 GNAT2P19087 354 aa13.09□□□□□ -0.31
SLC3A1-201ENST00000260649 CMA1P23946 247 aa13.09□□□□□ -0.31
SLC3A1-201ENST00000260649 NBPF5PQ86XG9 351 aaPredicted RBP13.09□□□□□ -0.31
SLC3A1-201ENST00000260649 NAT10Q9H0A0 1025 aaKnown RBP13.09□□□□□ -0.31
SLC3A1-201ENST00000260649 TRMT1Q9NXH9 659 aaKnown RBP13.09□□□□□ -0.31
SLC3A1-201ENST00000260649 AATFQ9NY61 560 aaKnown RBP eCLIP13.09□□□□□ -0.31
SLC3A1-201ENST00000260649 C4AP0C0L4 1744 aa13.09□□□□□ -0.31
SLC3A1-201ENST00000260649 C4BP0C0L5 1744 aa13.09□□□□□ -0.31
SLC3A1-201ENST00000260649 FMNL1O95466 1100 aaPredicted RBP13.09□□□□□ -0.31
SLC3A1-201ENST00000260649 AMIGO3Q86WK7 504 aa13.09□□□□□ -0.31
SLC3A1-201ENST00000260649 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.31
SLC3A1-201ENST00000260649 FAM205CA6NFA0 338 aa13.08□□□□□ -0.31
SLC3A1-201ENST00000260649 NMT2O60551 498 aa13.08□□□□□ -0.31
SLC3A1-201ENST00000260649 TERF1P54274 439 aa13.08□□□□□ -0.31
SLC3A1-201ENST00000260649 PTPAQ15257 358 aa13.08□□□□□ -0.31
SLC3A1-201ENST00000260649 SAFBQ15424 915 aaKnown RBP eCLIP13.08□□□□□ -0.31
SLC3A1-201ENST00000260649 TPD52L1Q16890 204 aaPredicted RBP13.08□□□□□ -0.31
SLC3A1-201ENST00000260649 KLHL34Q8N239 644 aa13.08□□□□□ -0.31
SLC3A1-201ENST00000260649 FANCBQ8NB91 859 aa13.08□□□□□ -0.31
SLC3A1-201ENST00000260649 IFNKQ9P0W0 207 aa13.08□□□□□ -0.31
SLC3A1-201ENST00000260649 MTMR7Q9Y216 660 aa13.08□□□□□ -0.31
SLC3A1-201ENST00000260649 BAZ2BQ9UIF8 2168 aaKnown RBP13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 COL1A1P02452 1464 aaPredicted RBP13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 RRP9O43818 475 aaKnown RBP13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 CAVIN2O95810 425 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 FAM47AQ5JRC9 791 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 MYRIPQ8NFW9 859 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 ZNF384Q8TF68 577 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 SETDB2Q96T68 719 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms