RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 CCDC170Q8IYT3 715 aa10.93□□□□□ -0.66
CTDSPL2-201ENST00000260327 PLVAPQ9BX97 442 aa10.93□□□□□ -0.66
CTDSPL2-201ENST00000260327 KIAA0556O60303 1618 aa10.93□□□□□ -0.66
CTDSPL2-201ENST00000260327 B4E1Z4 1266 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 CCDC97Q96F63 343 aaPredicted RBP10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 ACTN2P35609 894 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 GUCY2FP51841 1108 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 NLRP12P59046 1061 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 PPP2R5AQ15172 486 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 KDM6BO15054 1643 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 DENND4BO75064 1496 aaPredicted RBP10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 ABCC4O15439 1325 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 NOL3O60936 208 aaKnown RBP10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 CIB2O75838 187 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 PSMC4P43686 418 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 TUBB2AQ13885 445 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 DIXDC1Q155Q3 683 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 RAB3IL1Q8TBN0 382 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 TUBB2BQ9BVA1 445 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 CAPS2Q9BXY5 557 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 ZPR1O75312 459 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 E2F5Q15329 346 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 TNNI3KQ59H18 835 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 SECISBP2LQ93073 1101 aaKnown RBP10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 FPGT-TNNI3KV9GXZ4 949 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 ANKRD65E5RJM6 399 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 EEF2P13639 858 aaKnown RBP10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 PLCB3Q01970 1234 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 MGARPQ8TDB4 240 aa10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 DDX21Q9NR30 783 aaKnown RBP eCLIP10.92□□□□□ -0.66
CTDSPL2-201ENST00000260327 PTPRTO14522 1441 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 SHANK2Q9UPX8 1470 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 EFCAB8A8MWE9 144 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 TSPY3P0CV98 308 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 TSPY8P0CW00 308 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 CFAP57Q96MR6 1250 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 FAM204AQ9H8W3 233 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 JRKLQ9Y4A0 524 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 CALCOCO2Q13137 446 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 DDX12PQ92771 950 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 PHKBQ93100 1093 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 VCXQ9H320 206 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 MTMR6Q9Y217 621 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 NFE2L3Q9Y4A8 694 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 SAMM50Q9Y512 469 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 TXNDC9O14530 226 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 ALDH3A1P30838 453 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 CCDC26Q8TAB7 109 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 KIAA1524Q8TCG1 905 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 CRNKL1Q9BZJ0 848 aaKnown RBP10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 HELLSQ9NRZ9 838 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 AOX1Q06278 1338 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 FAM170AA1A519 330 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 TBCAO75347 108 aaKnown RBP10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 ERCC3P19447 782 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 TBC1D8BQ0IIM8 1120 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 RAPGEF1Q13905 1077 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 UAP1Q16222 522 aaPredicted RBP10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 GKAP1Q5VSY0 366 aaPredicted RBP10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 CDC5LQ99459 802 aaKnown RBP10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 NOC4LQ9BVI4 516 aaKnown RBP10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 TAB2Q9NYJ8 693 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 TPCN1Q9ULQ1 816 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 FERMT2Q96AC1 680 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 LLPHQ9BRT6 129 aaKnown RBP10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 MYL10Q9BUA6 226 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 LGR6Q9HBX8 967 aa10.91□□□□□ -0.66
CTDSPL2-201ENST00000260327 SYNRGQ9UMZ2 1314 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 ZBTB22O15209 634 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 PRPHP41219 470 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 WHAMMP3Q1A5X7 153 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 BEND3Q5T5X7 828 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 SUCLG2Q96I99 432 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 TSNARE1Q96NA8 513 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 GCC2Q8IWJ2 1684 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 HOXC9P31274 260 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 RNF10Q8N5U6 811 aaKnown RBP10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 JPH2Q9BR39 696 aaPredicted RBP10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 A6NNZ2 444 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 KRT9P35527 623 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 TNIP1Q15025 636 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 TUBB8Q3ZCM7 444 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 CEP120Q8N960 986 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 MCUR1Q96AQ8 359 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 ZNF594Q96JF6 807 aaPredicted RBP10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 NSFL1CQ9UNZ2 370 aaKnown RBP10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 ZNF521Q96K83 1311 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 BICDL2A1A5D9 508 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 CLTAP09496 248 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 NAPAP54920 295 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 IQUBQ8NA54 791 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 PPP2R2CQ9Y2T4 447 aa10.9□□□□□ -0.66
CTDSPL2-201ENST00000260327 GIGYF1O75420 1035 aaPredicted RBP10.9□□□□□ -0.67
CTDSPL2-201ENST00000260327 RFC1P35251 1148 aaPredicted RBP10.9□□□□□ -0.67
CTDSPL2-201ENST00000260327 RNMTO43148 476 aaKnown RBP10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 GYS2P54840 703 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 PNOCQ13519 176 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 SNCBQ16143 134 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 TTC6Q86TZ1 520 aa10.89□□□□□ -0.67
CTDSPL2-201ENST00000260327 CUL5Q93034 780 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms