RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 AFAP1L2Q8N4X5 818 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 NLRP7Q8WX94 980 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 EVI5LQ96CN4 794 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 SRPK1Q96SB4 655 aaKnown RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 IQCGQ9H095 443 aaKnown RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.54□□□□□ -1.68
RNF38-201ENST00000259605 RABGAP1Q9Y3P9 1069 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 RIMBP3CA6NJZ7 1639 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 RIMBP3BA6NNM3 1639 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 RIMBP3Q9UFD9 1639 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 PRMT3O60678 531 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 CRCPO75575 148 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 MCM5P33992 734 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 PPP1R2P41236 205 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 GTF2IP78347 998 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 C16orf72Q14CZ0 275 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 PPP2R5AQ15172 486 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 PTPAQ15257 358 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 C6orf163Q5TEZ5 329 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 NBPF10Q6P3W6 841 aaKnown RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 LUZP1Q86V48 1076 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 REM2Q8IYK8 340 aaPredicted RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 IPO4Q8TEX9 1081 aaKnown RBP4.54□□□□□ -1.68
RNF38-201ENST00000259605 AMNQ9BXJ7 453 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 ZNF341Q9BYN7 854 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 TMEM94Q12767 1356 aa4.54□□□□□ -1.68
RNF38-201ENST00000259605 CCDC169A6NNP5 214 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 PROCA1Q8NCQ7 364 aaPredicted RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 ZNF592Q92610 1267 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.53□□□□□ -1.68
RNF38-201ENST00000259605 TSEN34Q9BSV6 310 aaKnown RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 BOLA2Q9H3K6 86 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 SYNDIG1Q9H7V2 258 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 FBXL21Q9UKT6 434 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 LEMD3Q9Y2U8 911 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 NPHP4O75161 1426 aaPredicted RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 KIAA1107Q9UPP5 1409 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 NKTRP30414 1462 aaKnown RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 HARSP12081 509 aaKnown RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 CIITAP33076 1130 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 METAP2P50579 478 aaKnown RBP eCLIP4.53□□□□□ -1.68
RNF38-201ENST00000259605 MAP2K1Q02750 393 aaPredicted RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 PUM3Q15397 648 aaKnown RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 ANO6Q4KMQ2 910 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 MFSD14BQ5SR56 506 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 FCHSD1Q86WN1 690 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 NT5DC4Q86YG4 428 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 EFCAB13Q8IY85 973 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 TRIM47Q96LD4 638 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 JAKMIP1Q96N16 626 aaKnown RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 RAB3IPQ96QF0 476 aaPredicted RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 NAA15Q9BXJ9 866 aaKnown RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 CSRNP2Q9H175 543 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 DYRK4Q9NR20 520 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 EHD2Q9NZN4 543 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 HMG20BQ9P0W2 317 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 HESX1Q9UBX0 185 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 IPO11Q9UI26 975 aaKnown RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 CPSF3Q9UKF6 684 aaKnown RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 FRMD4BQ9Y2L6 1034 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 PAXBP1Q9Y5B6 917 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 WDR33Q9C0J8 1336 aaKnown RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 MMP10P09238 476 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 TSPY1Q01534 308 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 KRT17Q04695 432 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 KIF5AQ12840 1032 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 STK3Q13188 491 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 RTN1Q16799 776 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 RSRC2Q7L4I2 434 aaKnown RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 EFHBQ8N7U6 833 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 ZFP91Q96JP5 570 aaPredicted RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 PFDN4Q9NQP4 134 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 ECHDC1Q9NTX5 307 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 MKRN1Q9UHC7 482 aaKnown RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 ERICH3Q5RHP9 1530 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 TCP10L2B9ZVM9 353 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 CAPN9O14815 690 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 RRP9O43818 475 aaKnown RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 TNNC2P02585 160 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 USP17L8P0C7I0 530 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 PAFAH1B1P43034 410 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 NR1H3Q13133 447 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 KSR2Q6VAB6 950 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 OPTNQ96CV9 577 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 GJD4Q96KN9 370 aaPredicted RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 STN1Q9H668 368 aaKnown RBP4.53□□□□□ -1.68
RNF38-201ENST00000259605 FAM204AQ9H8W3 233 aa4.53□□□□□ -1.68
RNF38-201ENST00000259605 XDHP47989 1333 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 MAP3K13O43283 966 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 ALAS1P13196 640 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 PSMD2Q13200 908 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 MAP7D1Q3KQU3 841 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 LIN9Q5TKA1 542 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 BTBD8Q5XKL5 378 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 CEP128Q6ZU80 1094 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 PALM2Q8IXS6 379 aa4.52□□□□□ -1.69
RNF38-201ENST00000259605 TRMT44Q8IYL2 757 aaKnown RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 SH2B1Q9NRF2 756 aaPredicted RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 TFIP11Q9UBB9 837 aaKnown RBP4.52□□□□□ -1.69
RNF38-201ENST00000259605 AFG3L2Q9Y4W6 797 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms