RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 RNF41Q9H4P4 317 aaPredicted RBP32.48■■■□□ 2.79
CCM2-201ENST00000258781 ANAPC4Q9UJX5 808 aa32.48■■■□□ 2.79
CCM2-201ENST00000258781 UTRNP46939 3433 aa32.47■■■□□ 2.79
CCM2-201ENST00000258781 GOLGA8BA8MQT2 603 aa32.47■■■□□ 2.79
CCM2-201ENST00000258781 CAVIN1Q6NZI2 390 aaKnown RBP32.47■■■□□ 2.79
CCM2-201ENST00000258781 HPS5Q9UPZ3 1129 aa32.47■■■□□ 2.79
CCM2-201ENST00000258781 IL1R1P14778 569 aa32.46■■■□□ 2.79
CCM2-201ENST00000258781 GDPD2Q9HCC8 539 aa32.46■■■□□ 2.79
CCM2-201ENST00000258781 KLHL34Q8N239 644 aa32.46■■■□□ 2.79
CCM2-201ENST00000258781 BAZ2AQ9UIF9 1905 aaKnown RBP32.46■■■□□ 2.79
CCM2-201ENST00000258781 PRDX5P30044 214 aa32.45■■■□□ 2.79
CCM2-201ENST00000258781 DYNLL1P63167 89 aaKnown RBP32.45■■■□□ 2.79
CCM2-201ENST00000258781 PPARAQ07869 468 aa32.45■■■□□ 2.79
CCM2-201ENST00000258781 SDR42E1Q8WUS8 393 aa32.45■■■□□ 2.79
CCM2-201ENST00000258781 MTA3Q9BTC8 594 aa32.45■■■□□ 2.79
CCM2-201ENST00000258781 DNM1Q05193 864 aaKnown RBP32.44■■■□□ 2.78
CCM2-201ENST00000258781 NKX2-3Q8TAU0 364 aa32.44■■■□□ 2.78
CCM2-201ENST00000258781 ZC3H12CQ9C0D7 883 aaKnown RBP32.44■■■□□ 2.78
CCM2-201ENST00000258781 TACC3Q9Y6A5 838 aa32.44■■■□□ 2.78
CCM2-201ENST00000258781 H3BQV1 296 aa32.44■■■□□ 2.78
CCM2-201ENST00000258781 IFFO2Q5TF58 517 aa32.44■■■□□ 2.78
CCM2-201ENST00000258781 IGDCC4Q8TDY8 1250 aa32.44■■■□□ 2.78
CCM2-201ENST00000258781 RTFDC1Q9BY42 306 aaPredicted RBP32.44■■■□□ 2.78
CCM2-201ENST00000258781 LAMB1P07942 1786 aa32.43■■■□□ 2.78
CCM2-201ENST00000258781 SGMS1Q86VZ5 419 aa32.43■■■□□ 2.78
CCM2-201ENST00000258781 MYH15Q9Y2K3 1946 aa32.43■■■□□ 2.78
CCM2-201ENST00000258781 LIFRP42702 1097 aa32.42■■■□□ 2.78
CCM2-201ENST00000258781 ZNF445P59923 1031 aa32.42■■■□□ 2.78
CCM2-201ENST00000258781 FERMT3Q86UX7 667 aa32.42■■■□□ 2.78
CCM2-201ENST00000258781 ZSWIM5Q9P217 1185 aa32.42■■■□□ 2.78
CCM2-201ENST00000258781 CD2APQ9Y5K6 639 aa32.42■■■□□ 2.78
CCM2-201ENST00000258781 KDM4AO75164 1064 aa32.42■■■□□ 2.78
CCM2-201ENST00000258781 CC2D2BQ6DHV5 1058 aa32.42■■■□□ 2.78
CCM2-201ENST00000258781 ZSCAN16Q9H4T2 348 aaPredicted RBP32.42■■■□□ 2.78
CCM2-201ENST00000258781 PIM2Q9P1W9 311 aa32.42■■■□□ 2.78
CCM2-201ENST00000258781 KRT85P78386 507 aa32.41■■■□□ 2.78
CCM2-201ENST00000258781 ZSCAN23Q3MJ62 389 aa32.41■■■□□ 2.78
CCM2-201ENST00000258781 DZIP1Q86YF9 867 aaKnown RBP32.41■■■□□ 2.78
CCM2-201ENST00000258781 CRNKL1Q9BZJ0 848 aaKnown RBP32.41■■■□□ 2.78
CCM2-201ENST00000258781 LY9Q9HBG7 655 aa32.41■■■□□ 2.78
CCM2-201ENST00000258781 INCENPQ9NQS7 918 aa32.41■■■□□ 2.78
CCM2-201ENST00000258781 FIBPO43427 364 aa32.4■■■□□ 2.78
CCM2-201ENST00000258781 GADD45BO75293 160 aaPredicted RBP32.4■■■□□ 2.78
CCM2-201ENST00000258781 UBE2HP62256 183 aa32.4■■■□□ 2.78
CCM2-201ENST00000258781 TMEM67Q5HYA8 995 aa32.4■■■□□ 2.78
CCM2-201ENST00000258781 EYA3Q99504 573 aa32.4■■■□□ 2.78
CCM2-201ENST00000258781 COA1Q9GZY4 146 aa32.4■■■□□ 2.78
CCM2-201ENST00000258781 LDHBP07195 334 aaKnown RBP32.4■■■□□ 2.78
CCM2-201ENST00000258781 RESTQ13127 1097 aa32.4■■■□□ 2.78
CCM2-201ENST00000258781 DOK7Q18PE1 504 aa32.4■■■□□ 2.78
CCM2-201ENST00000258781 PCP11498 1178 aaKnown RBP32.39■■■□□ 2.78
CCM2-201ENST00000258781 MRE11P49959 708 aa32.39■■■□□ 2.78
CCM2-201ENST00000258781 APOA5Q6Q788 366 aa32.39■■■□□ 2.78
CCM2-201ENST00000258781 CCDC93Q567U6 631 aa32.38■■■□□ 2.77
CCM2-201ENST00000258781 SYAP1Q96A49 352 aaPredicted RBP32.38■■■□□ 2.77
CCM2-201ENST00000258781 TMEM63CQ9P1W3 806 aa32.38■■■□□ 2.77
CCM2-201ENST00000258781 SCN9AQ15858 1988 aa32.38■■■□□ 2.77
CCM2-201ENST00000258781 IFIT3O14879 490 aaKnown RBP32.37■■■□□ 2.77
CCM2-201ENST00000258781 GSTO1P78417 241 aa32.37■■■□□ 2.77
CCM2-201ENST00000258781 SART3Q15020 963 aaKnown RBP32.37■■■□□ 2.77
CCM2-201ENST00000258781 SPON1Q9HCB6 807 aa32.37■■■□□ 2.77
CCM2-201ENST00000258781 ATP8A2Q9NTI2 1148 aa32.37■■■□□ 2.77
CCM2-201ENST00000258781 RBM27Q9P2N5 1060 aaKnown RBP32.37■■■□□ 2.77
CCM2-201ENST00000258781 MINDY4BA8MYZ0 360 aa32.37■■■□□ 2.77
CCM2-201ENST00000258781 CPLX1O14810 134 aa32.37■■■□□ 2.77
CCM2-201ENST00000258781 FDPSP14324 419 aaKnown RBP32.37■■■□□ 2.77
CCM2-201ENST00000258781 GRIK5Q16478 980 aa32.37■■■□□ 2.77
CCM2-201ENST00000258781 AATFQ9NY61 560 aaKnown RBP eCLIP32.37■■■□□ 2.77
CCM2-201ENST00000258781 ELP1O95163 1332 aa32.36■■■□□ 2.77
CCM2-201ENST00000258781 METAP2P50579 478 aaKnown RBP eCLIP32.36■■■□□ 2.77
CCM2-201ENST00000258781 NID2Q14112 1375 aa32.36■■■□□ 2.77
CCM2-201ENST00000258781 RRP12Q5JTH9 1297 aaKnown RBP32.35■■■□□ 2.77
CCM2-201ENST00000258781 NFXL1Q6ZNB6 911 aa32.35■■■□□ 2.77
CCM2-201ENST00000258781 GAS2L3Q86XJ1 694 aa32.35■■■□□ 2.77
CCM2-201ENST00000258781 RGS22Q8NE09 1264 aa32.35■■■□□ 2.77
CCM2-201ENST00000258781 DBNDD1Q9H9R9 158 aa32.35■■■□□ 2.77
CCM2-201ENST00000258781 TOMM22Q9NS69 142 aa32.35■■■□□ 2.77
CCM2-201ENST00000258781 ZBTB43O43298 467 aa32.35■■■□□ 2.77
CCM2-201ENST00000258781 DALRD3Q5D0E6 543 aaKnown RBP32.35■■■□□ 2.77
CCM2-201ENST00000258781 NLGN2Q8NFZ4 835 aa32.35■■■□□ 2.77
CCM2-201ENST00000258781 SCAND2PQ9GZW5 306 aaPredicted RBP32.35■■■□□ 2.77
CCM2-201ENST00000258781 MYH2Q9UKX2 1941 aa32.35■■■□□ 2.77
CCM2-201ENST00000258781 ZNF646O15015 1829 aaPredicted RBP32.34■■■□□ 2.77
CCM2-201ENST00000258781 CDKL5O76039 1030 aa32.34■■■□□ 2.77
CCM2-201ENST00000258781 AOC3Q16853 763 aa32.34■■■□□ 2.77
CCM2-201ENST00000258781 CTR9Q6PD62 1173 aa32.34■■■□□ 2.77
CCM2-201ENST00000258781 ESR2Q92731 530 aa32.34■■■□□ 2.77
CCM2-201ENST00000258781 FER1L6Q2WGJ9 1857 aa32.34■■■□□ 2.77
CCM2-201ENST00000258781 FGRP09769 529 aa32.33■■■□□ 2.77
CCM2-201ENST00000258781 GRPEL1Q9HAV7 217 aa32.33■■■□□ 2.77
CCM2-201ENST00000258781 SENP2Q9HC62 589 aa32.33■■■□□ 2.77
CCM2-201ENST00000258781 DCP1AQ9NPI6 582 aaPredicted RBP32.33■■■□□ 2.77
CCM2-201ENST00000258781 FAM205AQ6ZU69 1335 aa32.33■■■□□ 2.77
CCM2-201ENST00000258781 CCDC69A6NI79 296 aa32.33■■■□□ 2.77
CCM2-201ENST00000258781 GTF2IP78347 998 aa32.33■■■□□ 2.77
CCM2-201ENST00000258781 CPLX2Q6PUV4 134 aaKnown RBP32.33■■■□□ 2.77
CCM2-201ENST00000258781 RTKN2Q8IZC4 609 aa32.33■■■□□ 2.77
CCM2-201ENST00000258781 TMTC2Q8N394 836 aa32.33■■■□□ 2.77
CCM2-201ENST00000258781 ORC3Q9UBD5 711 aaPredicted RBP32.33■■■□□ 2.77
CCM2-201ENST00000258781 ERICH2A1L162 156 aa32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms