RNA–Protein interactions for RNA: ENST00000258052.7

SMPD2-201, Transcript of sphingomyelin phosphodiesterase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD2, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2-201ENST00000258052 ARFGEF1Q9Y6D6 1849 aa25.07■■□□□ 1.6
SMPD2-201ENST00000258052 B4E1Z4 1266 aa25.06■■□□□ 1.6
SMPD2-201ENST00000258052 ME3Q16798 604 aa25.06■■□□□ 1.6
SMPD2-201ENST00000258052 HHIPL2Q6UWX4 724 aa25.06■■□□□ 1.6
SMPD2-201ENST00000258052 RNF41Q9H4P4 317 aaPredicted RBP25.06■■□□□ 1.6
SMPD2-201ENST00000258052 CNNM2Q9H8M5 875 aa25.06■■□□□ 1.6
SMPD2-201ENST00000258052 NFKBIEO00221 500 aa25.05■■□□□ 1.6
SMPD2-201ENST00000258052 RHBDL3P58872 404 aa25.05■■□□□ 1.6
SMPD2-201ENST00000258052 KRT23Q9C075 422 aa25.05■■□□□ 1.6
SMPD2-201ENST00000258052 TOMM22Q9NS69 142 aa25.05■■□□□ 1.6
SMPD2-201ENST00000258052 RAD17O75943 681 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 DDIT3P35638 169 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 CRKP46108 304 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 ANTXR2P58335 489 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 RRP12Q5JTH9 1297 aaKnown RBP25.04■■□□□ 1.6
SMPD2-201ENST00000258052 MAPKAPK5Q8IW41 473 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 INTS4Q96HW7 963 aaKnown RBP25.04■■□□□ 1.6
SMPD2-201ENST00000258052 CHMP5Q9NZZ3 219 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 MKRN1Q9UHC7 482 aaKnown RBP25.04■■□□□ 1.6
SMPD2-201ENST00000258052 ZNRF3Q9ULT6 936 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 WDR19Q8NEZ3 1342 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 SMIM22K7EJ46 135 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 USP17L8P0C7I0 530 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 CYP2D6P10635 497 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 SBK1Q52WX2 424 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 CYB5R4Q7L1T6 521 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 NKX2-3Q8TAU0 364 aa25.04■■□□□ 1.6
SMPD2-201ENST00000258052 CCDC83Q8IWF9 413 aa25.03■■□□□ 1.6
SMPD2-201ENST00000258052 AGXT2Q9BYV1 514 aa25.03■■□□□ 1.6
SMPD2-201ENST00000258052 FHDC1Q9C0D6 1143 aaPredicted RBP25.03■■□□□ 1.6
SMPD2-201ENST00000258052 CWC22Q9HCG8 908 aaKnown RBP25.03■■□□□ 1.6
SMPD2-201ENST00000258052 FOCADQ5VW36 1801 aa25.03■■□□□ 1.6
SMPD2-201ENST00000258052 PSMD14O00487 310 aa25.02■■□□□ 1.6
SMPD2-201ENST00000258052 KDM4AO75164 1064 aa25.02■■□□□ 1.6
SMPD2-201ENST00000258052 APOBRQ0VD83 1088 aa25.02■■□□□ 1.6
SMPD2-201ENST00000258052 SLC4A8Q2Y0W8 1093 aa25.02■■□□□ 1.6
SMPD2-201ENST00000258052 AMOTL1Q8IY63 956 aa25.02■■□□□ 1.6
SMPD2-201ENST00000258052 NECAB1Q8N987 351 aa25.02■■□□□ 1.6
SMPD2-201ENST00000258052 MRIQ9BWK5 157 aa25.02■■□□□ 1.6
SMPD2-201ENST00000258052 RBM5P52756 815 aaKnown RBP eCLIP25.01■■□□□ 1.59
SMPD2-201ENST00000258052 HDLBPQ00341 1268 aaKnown RBP25.01■■□□□ 1.59
SMPD2-201ENST00000258052 EVX2Q03828 476 aa25.01■■□□□ 1.59
SMPD2-201ENST00000258052 STK3Q13188 491 aa25.01■■□□□ 1.59
SMPD2-201ENST00000258052 RSBN1LQ6PCB5 846 aaPredicted RBP25.01■■□□□ 1.59
SMPD2-201ENST00000258052 JDP2Q8WYK2 163 aa25.01■■□□□ 1.59
SMPD2-201ENST00000258052 GPHNQ9NQX3 736 aaPredicted RBP25.01■■□□□ 1.59
SMPD2-201ENST00000258052 USP40Q9NVE5 1235 aa25.01■■□□□ 1.59
SMPD2-201ENST00000258052 SAP30BPQ9UHR5 308 aaKnown RBP25.01■■□□□ 1.59
SMPD2-201ENST00000258052 MYO3BQ8WXR4 1341 aa25.01■■□□□ 1.59
SMPD2-201ENST00000258052 MYH1P12882 1939 aa25.01■■□□□ 1.59
SMPD2-201ENST00000258052 FLT1P17948 1338 aa25.01■■□□□ 1.59
SMPD2-201ENST00000258052 SLC3A2P08195 630 aaKnown RBP25.01■■□□□ 1.59
SMPD2-201ENST00000258052 RASSF7Q02833 373 aa25.01■■□□□ 1.59
SMPD2-201ENST00000258052 FBXL16Q8N461 479 aa25.01■■□□□ 1.59
SMPD2-201ENST00000258052 ZDHHC15Q96MV8 337 aa25.01■■□□□ 1.59
SMPD2-201ENST00000258052 CIZ1Q9ULV3 898 aaPredicted RBP25.01■■□□□ 1.59
SMPD2-201ENST00000258052 ECM29Q5VYK3 1845 aa25■■□□□ 1.59
SMPD2-201ENST00000258052 LTBP3Q9NS15 1303 aa25■■□□□ 1.59
SMPD2-201ENST00000258052 VIL1P09327 827 aaKnown RBP25■■□□□ 1.59
SMPD2-201ENST00000258052 APOBEC3HQ6NTF7 200 aaKnown RBP25■■□□□ 1.59
SMPD2-201ENST00000258052 ZSWIM5Q9P217 1185 aa25■■□□□ 1.59
SMPD2-201ENST00000258052 ZSCAN21Q9Y5A6 473 aaPredicted RBP25■■□□□ 1.59
SMPD2-201ENST00000258052 DDX60LQ5H9U9 1706 aaKnown RBP25■■□□□ 1.59
SMPD2-201ENST00000258052 POLR3DP05423 398 aaPredicted RBP24.99■■□□□ 1.59
SMPD2-201ENST00000258052 ST3GAL1Q11201 340 aa24.99■■□□□ 1.59
SMPD2-201ENST00000258052 C12orf60Q5U649 245 aa24.99■■□□□ 1.59
SMPD2-201ENST00000258052 CDC42EP5Q6NZY7 148 aa24.99■■□□□ 1.59
SMPD2-201ENST00000258052 SERPINA10Q9UK55 444 aa24.99■■□□□ 1.59
SMPD2-201ENST00000258052 NAP1L2Q9ULW6 460 aaPredicted RBP24.99■■□□□ 1.59
SMPD2-201ENST00000258052 PCP11498 1178 aaKnown RBP24.98■■□□□ 1.59
SMPD2-201ENST00000258052 ESR2Q92731 530 aa24.98■■□□□ 1.59
SMPD2-201ENST00000258052 PCDHAC2Q9Y5I4 1007 aa24.98■■□□□ 1.59
SMPD2-201ENST00000258052 SH2B2O14492 632 aaPredicted RBP24.97■■□□□ 1.59
SMPD2-201ENST00000258052 PRDM1O75626 825 aa24.97■■□□□ 1.59
SMPD2-201ENST00000258052 PICALMQ13492 652 aa24.97■■□□□ 1.59
SMPD2-201ENST00000258052 TMEM87BQ96K49 555 aa24.97■■□□□ 1.59
SMPD2-201ENST00000258052 FGRP09769 529 aa24.97■■□□□ 1.59
SMPD2-201ENST00000258052 CXCL9Q07325 125 aa24.97■■□□□ 1.59
SMPD2-201ENST00000258052 PDE4BQ07343 736 aa24.97■■□□□ 1.59
SMPD2-201ENST00000258052 ANGEL1Q9UNK9 670 aaKnown RBP24.97■■□□□ 1.59
SMPD2-201ENST00000258052 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.97■■□□□ 1.59
SMPD2-201ENST00000258052 IFIT3O14879 490 aaKnown RBP24.96■■□□□ 1.59
SMPD2-201ENST00000258052 WDHD1O75717 1129 aaPredicted RBP24.96■■□□□ 1.59
SMPD2-201ENST00000258052 TMEM67Q5HYA8 995 aa24.96■■□□□ 1.59
SMPD2-201ENST00000258052 GTF3C6Q969F1 213 aa24.96■■□□□ 1.59
SMPD2-201ENST00000258052 SMC3Q9UQE7 1217 aa24.96■■□□□ 1.59
SMPD2-201ENST00000258052 ZBTB12Q9Y330 459 aaPredicted RBP24.96■■□□□ 1.59
SMPD2-201ENST00000258052 ORC4O43929 436 aa24.95■■□□□ 1.58
SMPD2-201ENST00000258052 RANBP6O60518 1105 aaKnown RBP24.95■■□□□ 1.58
SMPD2-201ENST00000258052 CFAP100Q494V2 611 aa24.95■■□□□ 1.58
SMPD2-201ENST00000258052 CIAPIN1Q6FI81 312 aa24.95■■□□□ 1.58
SMPD2-201ENST00000258052 IGDCC4Q8TDY8 1250 aa24.95■■□□□ 1.58
SMPD2-201ENST00000258052 ZNF274Q96GC6 653 aaPredicted RBP24.95■■□□□ 1.58
SMPD2-201ENST00000258052 GMLQ99445 158 aa24.95■■□□□ 1.58
SMPD2-201ENST00000258052 ROBO3Q96MS0 1386 aa24.95■■□□□ 1.58
SMPD2-201ENST00000258052 KLF18A0A0U1RQI7 1052 aa24.94■■□□□ 1.58
SMPD2-201ENST00000258052 PFKFB2O60825 505 aa24.94■■□□□ 1.58
SMPD2-201ENST00000258052 PLCD1P51178 756 aa24.94■■□□□ 1.58
SMPD2-201ENST00000258052 EVCP57679 992 aa24.94■■□□□ 1.58
SMPD2-201ENST00000258052 SART3Q15020 963 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms