RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 DZIP1Q86YF9 867 aaKnown RBP17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 BSDC1Q9NW68 430 aaPredicted RBP17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 LRP6O75581 1613 aa17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 KIF28PB7ZC32 967 aa17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 RIMBP2O15034 1052 aa17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 WTAPQ15007 396 aa17.01■□□□□ 0.31
TRAFD1-201ENST00000257604 TRIM29Q14134 588 aa17■□□□□ 0.31
TRAFD1-201ENST00000257604 GUCY1A2P33402 732 aa17■□□□□ 0.31
TRAFD1-201ENST00000257604 MSL1Q68DK7 614 aa17■□□□□ 0.31
TRAFD1-201ENST00000257604 TMEM87AQ8NBN3 555 aa17■□□□□ 0.31
TRAFD1-201ENST00000257604 RPGRQ92834 1020 aaKnown RBP17■□□□□ 0.31
TRAFD1-201ENST00000257604 ALDH8A1Q9H2A2 487 aaPredicted RBP17■□□□□ 0.31
TRAFD1-201ENST00000257604 ZSCAN16Q9H4T2 348 aaPredicted RBP17■□□□□ 0.31
TRAFD1-201ENST00000257604 C6orf229H3BNL8 230 aa16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 TYRO3Q06418 890 aa16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 PPARAQ07869 468 aa16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 NAA30Q147X3 362 aaPredicted RBP16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 LLPHQ9BRT6 129 aaKnown RBP16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 KINO60870 393 aaKnown RBP16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 SART3Q15020 963 aaKnown RBP16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 OLFM4Q6UX06 510 aa16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 ZNF396Q96N95 335 aaPredicted RBP16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 NYXQ9GZU5 481 aa16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 MYO5AQ9Y4I1 1855 aaKnown RBP16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 SH2B2O14492 632 aaPredicted RBP16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 MECOMQ03112 1051 aa16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 GOLPH3LQ9H4A5 285 aa16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 SAP30BPQ9UHR5 308 aaKnown RBP16.99■□□□□ 0.31
TRAFD1-201ENST00000257604 ZNF804BA4D1E1 1349 aa16.98■□□□□ 0.31
TRAFD1-201ENST00000257604 ZRSR1Q15695 479 aaKnown RBP16.98■□□□□ 0.31
TRAFD1-201ENST00000257604 CCDC94Q9BW85 323 aaPredicted RBP16.98■□□□□ 0.31
TRAFD1-201ENST00000257604 U2AF2P26368 475 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRAFD1-201ENST00000257604 ILDR1Q86SU0 546 aaPredicted RBP16.98■□□□□ 0.31
TRAFD1-201ENST00000257604 FNBP4Q8N3X1 1017 aaPredicted RBP16.98■□□□□ 0.31
TRAFD1-201ENST00000257604 MCM9Q9NXL9 1143 aa16.98■□□□□ 0.31
TRAFD1-201ENST00000257604 PAPPAQ13219 1627 aa16.98■□□□□ 0.31
TRAFD1-201ENST00000257604 KRT40Q6A162 431 aa16.97■□□□□ 0.31
TRAFD1-201ENST00000257604 FBXO18Q8NFZ0 1043 aa16.97■□□□□ 0.31
TRAFD1-201ENST00000257604 ZNF592Q92610 1267 aa16.97■□□□□ 0.31
TRAFD1-201ENST00000257604 LTBP4Q8N2S1 1624 aa16.97■□□□□ 0.31
TRAFD1-201ENST00000257604 LRMPQ12912 555 aa16.97■□□□□ 0.31
TRAFD1-201ENST00000257604 LY9Q9HBG7 655 aa16.97■□□□□ 0.31
TRAFD1-201ENST00000257604 PLCH1Q4KWH8 1693 aa16.97■□□□□ 0.31
TRAFD1-201ENST00000257604 AHDC1Q5TGY3 1603 aaPredicted RBP16.97■□□□□ 0.31
TRAFD1-201ENST00000257604 UBE4AQ14139 1066 aa16.97■□□□□ 0.31
TRAFD1-201ENST00000257604 SF3B3Q15393 1217 aaKnown RBP16.97■□□□□ 0.31
TRAFD1-201ENST00000257604 MTERF4Q7Z6M4 381 aaKnown RBP16.97■□□□□ 0.31
TRAFD1-201ENST00000257604 IGDCC4Q8TDY8 1250 aa16.97■□□□□ 0.31
TRAFD1-201ENST00000257604 PCDHA7Q9UN72 937 aa16.97■□□□□ 0.31
TRAFD1-201ENST00000257604 USP5P45974 858 aa16.96■□□□□ 0.31
TRAFD1-201ENST00000257604 COL4A1P02462 1669 aa16.96■□□□□ 0.31
TRAFD1-201ENST00000257604 AKAP17AQ02040 695 aaKnown RBP16.96■□□□□ 0.31
TRAFD1-201ENST00000257604 SSRP1Q08945 709 aaKnown RBP16.96■□□□□ 0.31
TRAFD1-201ENST00000257604 GRIK5Q16478 980 aa16.96■□□□□ 0.31
TRAFD1-201ENST00000257604 RTN1Q16799 776 aa16.96■□□□□ 0.31
TRAFD1-201ENST00000257604 CLIC6Q96NY7 704 aa16.96■□□□□ 0.31
TRAFD1-201ENST00000257604 TRIM5Q9C035 493 aa16.96■□□□□ 0.31
TRAFD1-201ENST00000257604 BTBD18B2RXH4 712 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 UFL1O94874 794 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 USP17L8P0C7I0 530 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 PTGS1P23219 599 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 C16orf45Q96MC5 204 aaPredicted RBP16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 AGXT2Q9BYV1 514 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 KCNF1Q9H3M0 494 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 NRBP1Q9UHY1 535 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 TNKSO95271 1327 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 PDILTQ8N807 584 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 DYNLL2Q96FJ2 89 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 ZNF512BQ96KM6 892 aaPredicted RBP16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 RIOK3O14730 519 aaKnown RBP16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 LETM1O95202 739 aaPredicted RBP16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 ZNF165P49910 485 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 HSP90AA4PQ58FG1 418 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 ZNF384Q8TF68 577 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 KRT23Q9C075 422 aa16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 V9GYY5 206 aaPredicted RBP16.95■□□□□ 0.3
TRAFD1-201ENST00000257604 RAD21O60216 631 aa16.94■□□□□ 0.3
TRAFD1-201ENST00000257604 NR5A1Q13285 461 aa16.94■□□□□ 0.3
TRAFD1-201ENST00000257604 UVSSAQ2YD98 709 aa16.94■□□□□ 0.3
TRAFD1-201ENST00000257604 MYSM1Q5VVJ2 828 aa16.94■□□□□ 0.3
TRAFD1-201ENST00000257604 BECN2A8MW95 431 aa16.94■□□□□ 0.3
TRAFD1-201ENST00000257604 NDUFA8P51970 172 aa16.94■□□□□ 0.3
TRAFD1-201ENST00000257604 SMAP1Q8IYB5 467 aaPredicted RBP16.94■□□□□ 0.3
TRAFD1-201ENST00000257604 MRVI1Q9Y6F6 885 aa16.94■□□□□ 0.3
TRAFD1-201ENST00000257604 TSPY2A6NKD2 308 aa16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 SPTLC2O15270 562 aa16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 PDIA4P13667 645 aaKnown RBP16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 IFIT1BQ5T764 474 aaKnown RBP16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 MAPKAPK5Q8IW41 473 aa16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 VPS54Q9P1Q0 977 aa16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 SERPINB2P05120 415 aa16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 TRIM22Q8IYM9 498 aa16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 SLC44A5Q8NCS7 719 aa16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 ESR2Q92731 530 aa16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 PRIMPOLQ96LW4 560 aa16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 TRPC5Q9UL62 973 aaPredicted RBP16.93■□□□□ 0.3
TRAFD1-201ENST00000257604 ZMYM6O95789 1325 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms