RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 RAB11FIP4Q86YS3 637 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 FAM204AQ9H8W3 233 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 CCDC169A6NNP5 214 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 ZWINTO95229 277 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 SLC1A4P43007 532 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 BIRC3Q13489 604 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 PTPDC1A2A3K4 754 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 A6NNZ2 444 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 TUBB8Q3ZCM7 444 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 KRT25Q7Z3Z0 450 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 RNF34Q969K3 372 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 SRGAP1Q7Z6B7 1085 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 LRRC2Q9BYS8 371 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 SHANK2Q9UPX8 1470 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 UNC13AQ9UPW8 1703 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 TRAPPC8Q9Y2L5 1435 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 GNA14O95837 355 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 KRT5P13647 590 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 SYT1P21579 422 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 ZSCAN23Q3MJ62 389 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 HELBQ8NG08 1087 aaPredicted RBP8.22□□□□□ -1.09
SSR1-201ENST00000244763 MAIP1Q8WWC4 291 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 SLC52A2Q9HAB3 445 aa8.22□□□□□ -1.09
SSR1-201ENST00000244763 NOC2LQ9Y3T9 749 aaKnown RBP8.22□□□□□ -1.09
SSR1-201ENST00000244763 MAP3K19Q56UN5 1328 aa8.21□□□□□ -1.09
SSR1-201ENST00000244763 E7EVH7 732 aa8.21□□□□□ -1.09
SSR1-201ENST00000244763 SH3BP5O60239 455 aa8.21□□□□□ -1.09
SSR1-201ENST00000244763 TNFAIP3P21580 790 aa8.21□□□□□ -1.09
SSR1-201ENST00000244763 ATP2B4P23634 1241 aa8.21□□□□□ -1.09
SSR1-201ENST00000244763 DCAF17Q5H9S7 520 aaPredicted RBP8.21□□□□□ -1.09
SSR1-201ENST00000244763 TTC16Q8NEE8 873 aa8.21□□□□□ -1.09
SSR1-201ENST00000244763 TBC1D31Q96DN5 1066 aa8.21□□□□□ -1.09
SSR1-201ENST00000244763 NACA2Q9H009 215 aa8.21□□□□□ -1.09
SSR1-201ENST00000244763 CCNT1O60563 726 aaKnown RBP8.21□□□□□ -1.09
SSR1-201ENST00000244763 PCP11498 1178 aaKnown RBP8.21□□□□□ -1.09
SSR1-201ENST00000244763 PAIP2Q9BPZ3 127 aaKnown RBP8.21□□□□□ -1.09
SSR1-201ENST00000244763 PA2G4Q9UQ80 394 aaKnown RBP8.21□□□□□ -1.09
SSR1-201ENST00000244763 TRAF5O00463 557 aa8.21□□□□□ -1.09
SSR1-201ENST00000244763 CCDC6Q16204 474 aa8.21□□□□□ -1.09
SSR1-201ENST00000244763 DYNC1I1O14576 645 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 ACTN4O43707 911 aaKnown RBP8.21□□□□□ -1.1
SSR1-201ENST00000244763 SKILP12757 684 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 GPCPD1Q9NPB8 672 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 APOBRQ0VD83 1088 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 AOPEPQ8N6M6 819 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 SMCR8Q8TEV9 937 aaPredicted RBP8.21□□□□□ -1.1
SSR1-201ENST00000244763 FAM89AQ96GI7 184 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 CCDC114Q96M63 670 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 APBA3O96018 575 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 BIRC2Q13490 618 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 CWF19L2Q2TBE0 894 aaKnown RBP8.21□□□□□ -1.1
SSR1-201ENST00000244763 CFAP157Q5JU67 520 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 RIOK1Q9BRS2 568 aaKnown RBP8.21□□□□□ -1.1
SSR1-201ENST00000244763 NT5C3AQ9H0P0 336 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 GOLGA6CA6NDK9 693 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 GOLGA6BA6NDN3 693 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 GOLGA6DP0CG33 693 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 HCLS1P14317 486 aaPredicted RBP8.21□□□□□ -1.1
SSR1-201ENST00000244763 HAUS7Q99871 368 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 GOLGA6AQ9NYA3 693 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 FEZ2Q9UHY8 353 aaPredicted RBP8.21□□□□□ -1.1
SSR1-201ENST00000244763 BRPF3Q9ULD4 1205 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 KDM3AQ9Y4C1 1321 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 KIAA0556O60303 1618 aa8.21□□□□□ -1.1
SSR1-201ENST00000244763 TMEM110-MUSTN1A8MSY1 372 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 PTGS1P23219 599 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 ERICH4A6NGS2 130 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 PSMC4P43686 418 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 AK2P54819 239 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 ARID5AQ03989 594 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 PDE4DQ08499 809 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 TSHZ3Q63HK5 1081 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 DAAM2Q86T65 1068 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 UBL4BQ8N7F7 174 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 CARD10Q9BWT7 1032 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 TNNI3KQ59H18 835 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 NOC4LQ9BVI4 516 aaKnown RBP8.2□□□□□ -1.1
SSR1-201ENST00000244763 ARPP21Q9UBL0 812 aaPredicted RBP8.2□□□□□ -1.1
SSR1-201ENST00000244763 FPGT-TNNI3KV9GXZ4 949 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 H0YCG3 227 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 IGHDP01880 384 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 RPS6KB1P23443 525 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 MYL5Q02045 173 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 LGSNQ5TDP6 509 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 CNKSR1Q969H4 720 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 ZNF408Q9H9D4 720 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 SBNO2Q9Y2G9 1366 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 GSDMBQ8TAX9 411 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 MIS12Q9H081 205 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 ARHGEF12Q9NZN5 1544 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 SAP30BPQ9UHR5 308 aaKnown RBP8.2□□□□□ -1.1
SSR1-201ENST00000244763 DNM1Q05193 864 aaKnown RBP8.2□□□□□ -1.1
SSR1-201ENST00000244763 CDC37L1Q7L3B6 337 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 FCHSD1Q86WN1 690 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 PLCD3Q8N3E9 789 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 FAM184BQ9ULE4 1060 aa8.2□□□□□ -1.1
SSR1-201ENST00000244763 LEO1Q8WVC0 666 aaPredicted RBP8.19□□□□□ -1.1
SSR1-201ENST00000244763 XAGE2Q96GT9 111 aa8.19□□□□□ -1.1
SSR1-201ENST00000244763 STIM2Q9P246 746 aa8.19□□□□□ -1.1
SSR1-201ENST00000244763 PLXNC1O60486 1568 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 672.5 ms