RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 DTHD1Q6ZMT9 781 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 RNF168Q8IYW5 571 aaPredicted RBP7.53□□□□□ -1.2
CSMD2-201ENST00000241312 PCDHB15Q9Y5E8 787 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 ZMYM4Q5VZL5 1548 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 VWA3AA6NCI4 1184 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 GIPC1O14908 333 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 PARP1P09874 1014 aaKnown RBP7.53□□□□□ -1.2
CSMD2-201ENST00000241312 RFC1P35251 1148 aaPredicted RBP7.53□□□□□ -1.2
CSMD2-201ENST00000241312 GBP5Q96PP8 586 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 RAB3IPQ96QF0 476 aaPredicted RBP7.53□□□□□ -1.2
CSMD2-201ENST00000241312 HAUS7Q99871 368 aa7.53□□□□□ -1.2
CSMD2-201ENST00000241312 ZNF365Q70YC5 407 aa7.52□□□□□ -1.2
CSMD2-201ENST00000241312 AGTPBP1Q9UPW5 1226 aa7.52□□□□□ -1.2
CSMD2-201ENST00000241312 MAGEB6P1A0A0J9YX57 407 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 PPP2R5EQ16537 467 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 OGFOD1Q8N543 542 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 LLPHQ9BRT6 129 aaKnown RBP7.52□□□□□ -1.21
CSMD2-201ENST00000241312 HAUS2Q9NVX0 235 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 ARHGEF2Q92974 986 aaKnown RBP7.52□□□□□ -1.21
CSMD2-201ENST00000241312 KRT5P13647 590 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 RASA3Q14644 834 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 LGSNQ5TDP6 509 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 CCDC65Q8IXS2 484 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 TACC3Q9Y6A5 838 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 RAPGEF3O95398 923 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 STX17P56962 302 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 CERS3Q8IU89 383 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 C16orf71Q8IYS4 520 aaPredicted RBP7.52□□□□□ -1.21
CSMD2-201ENST00000241312 CCDC89Q8N998 374 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 KCNH3Q9ULD8 1083 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 ADGBQ8N7X0 1667 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 DPH6Q7L8W6 267 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 TMTC1Q8IUR5 882 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 ZNF219Q9P2Y4 722 aaPredicted RBP7.52□□□□□ -1.21
CSMD2-201ENST00000241312 PIK3C2GO75747 1445 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.52□□□□□ -1.21
CSMD2-201ENST00000241312 CHST3Q7LGC8 479 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 SPATS2Q86XZ4 545 aaKnown RBP7.52□□□□□ -1.21
CSMD2-201ENST00000241312 NOC4LQ9BVI4 516 aaKnown RBP7.52□□□□□ -1.21
CSMD2-201ENST00000241312 IFIH1Q9BYX4 1025 aaKnown RBP7.52□□□□□ -1.21
CSMD2-201ENST00000241312 PPANQ9NQ55 473 aaKnown RBP7.52□□□□□ -1.21
CSMD2-201ENST00000241312 ABCC1P33527 1531 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 LUC7L3O95232 432 aaKnown RBP7.52□□□□□ -1.21
CSMD2-201ENST00000241312 ZNF75DP51815 510 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 CFAP221Q4G0U5 840 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 PNMA8AQ86V59 439 aaPredicted RBP7.52□□□□□ -1.21
CSMD2-201ENST00000241312 MAP2K2P36507 400 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 XAGE3Q8WTP9 111 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 MEIS3Q99687 375 aa7.52□□□□□ -1.21
CSMD2-201ENST00000241312 SEC24BO95487 1268 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 ATP8B2P98198 1209 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 PHLDB3Q6NSJ2 640 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 KSR2Q6VAB6 950 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 FCHSD1Q86WN1 690 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 ATP2A3Q93084 1043 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 CLSTN2Q9H4D0 955 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 POLR3AO14802 1390 aaPredicted RBP7.51□□□□□ -1.21
CSMD2-201ENST00000241312 P3H4Q92791 437 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 MAP3K5Q99683 1374 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 PPIP5K1Q6PFW1 1433 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 PAK1Q13153 545 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 EXOC7Q9UPT5 735 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 VGLL3A8MV65 326 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 NUP58Q9BVL2 599 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 TNNQ9UQP3 1299 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 CALUO43852 315 aaPredicted RBP7.51□□□□□ -1.21
CSMD2-201ENST00000241312 CCDC84Q86UT8 332 aaPredicted RBP7.51□□□□□ -1.21
CSMD2-201ENST00000241312 IRX4P78413 519 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 ANO1Q5XXA6 986 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 BIVM-ERCC5R4GMW8 1640 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 TBC1D8BQ0IIM8 1120 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 PLS1Q14651 629 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 TAF12Q16514 161 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 MAGEB6Q8N7X4 407 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 SH2D4AQ9H788 454 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 MED4Q9NPJ6 270 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 FLT4P35916 1363 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 CD109Q6YHK3 1445 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 DTNBO60941 627 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 HHATQ5VTY9 493 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 FANCAO15360 1455 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 RRAGDQ9NQL2 400 aaPredicted RBP7.51□□□□□ -1.21
CSMD2-201ENST00000241312 TTC36A6NLP5 189 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 EXOC5O00471 708 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 U2AF2P26368 475 aaKnown RBP eCLIP7.51□□□□□ -1.21
CSMD2-201ENST00000241312 VSIG1Q86XK7 387 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 RNF10Q8N5U6 811 aaKnown RBP7.51□□□□□ -1.21
CSMD2-201ENST00000241312 ASIC3Q9UHC3 531 aa7.51□□□□□ -1.21
CSMD2-201ENST00000241312 DEXIO95424 95 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 RFC4P35249 363 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 LINS1Q8NG48 757 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 NUCKS1Q9H1E3 243 aaKnown RBP7.5□□□□□ -1.21
CSMD2-201ENST00000241312 LAMC3Q9Y6N6 1575 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 CUTAO60888 179 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 SF3A3Q12874 501 aaKnown RBP eCLIP7.5□□□□□ -1.21
CSMD2-201ENST00000241312 USP26Q9BXU7 913 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 IBTKQ9P2D0 1353 aaPredicted RBP7.5□□□□□ -1.21
CSMD2-201ENST00000241312 MCM9Q9NXL9 1143 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 CA8P35219 290 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 APOBRQ0VD83 1088 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms