RNA–Protein interactions for RNA: ENST00000239849.8

TNFSF11-201, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-201ENST00000239849 CHAF1AQ13111 956 aaPredicted RBP16.39■□□□□ 0.21
TNFSF11-201ENST00000239849 PABPC4Q13310 644 aaKnown RBP eCLIP16.39■□□□□ 0.21
TNFSF11-201ENST00000239849 MAP3K21Q5TCX8 1036 aa16.39■□□□□ 0.21
TNFSF11-201ENST00000239849 AFG3L2Q9Y4W6 797 aa16.39■□□□□ 0.21
TNFSF11-201ENST00000239849 ARIH1Q9Y4X5 557 aaPredicted RBP16.39■□□□□ 0.21
TNFSF11-201ENST00000239849 PRKAR2AP13861 404 aaKnown RBP16.38■□□□□ 0.21
TNFSF11-201ENST00000239849 PTPRAP18433 802 aa16.38■□□□□ 0.21
TNFSF11-201ENST00000239849 C8orf58Q8NAV2 365 aa16.38■□□□□ 0.21
TNFSF11-201ENST00000239849 GJD2Q9UKL4 321 aa16.38■□□□□ 0.21
TNFSF11-201ENST00000239849 A0A1B0GUL6 1792 aa16.37■□□□□ 0.21
TNFSF11-201ENST00000239849 XRCC5P13010 732 aaKnown RBP16.37■□□□□ 0.21
TNFSF11-201ENST00000239849 MAP3K12Q12852 859 aa16.37■□□□□ 0.21
TNFSF11-201ENST00000239849 WDR43Q15061 677 aaKnown RBP eCLIP16.37■□□□□ 0.21
TNFSF11-201ENST00000239849 SOCS4Q8WXH5 440 aa16.37■□□□□ 0.21
TNFSF11-201ENST00000239849 RAPGEFL1Q9UHV5 662 aa16.37■□□□□ 0.21
TNFSF11-201ENST00000239849 MUC3AQ02505 3323 aa16.37■□□□□ 0.21
TNFSF11-201ENST00000239849 FOXO4P98177 505 aa16.36■□□□□ 0.21
TNFSF11-201ENST00000239849 TCP10Q12799 353 aa16.36■□□□□ 0.21
TNFSF11-201ENST00000239849 TRIM32Q13049 653 aa16.36■□□□□ 0.21
TNFSF11-201ENST00000239849 GRIK5Q16478 980 aa16.36■□□□□ 0.21
TNFSF11-201ENST00000239849 FBXO33Q7Z6M2 555 aa16.36■□□□□ 0.21
TNFSF11-201ENST00000239849 PROCA1Q8NCQ7 364 aaPredicted RBP16.36■□□□□ 0.21
TNFSF11-201ENST00000239849 ATXN2LQ8WWM7 1075 aaKnown RBP16.36■□□□□ 0.21
TNFSF11-201ENST00000239849 TRIB2Q92519 343 aa16.36■□□□□ 0.21
TNFSF11-201ENST00000239849 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
TNFSF11-201ENST00000239849 LRRFIP2Q9Y608 721 aaKnown RBP16.36■□□□□ 0.21
TNFSF11-201ENST00000239849 MROH5Q6ZUA9 1318 aa16.36■□□□□ 0.21
TNFSF11-201ENST00000239849 RALBP1Q15311 655 aa16.35■□□□□ 0.21
TNFSF11-201ENST00000239849 LMBR1LQ6UX01 489 aa16.35■□□□□ 0.21
TNFSF11-201ENST00000239849 DNAAF4Q8WXU2 420 aa16.35■□□□□ 0.21
TNFSF11-201ENST00000239849 C1QTNF1Q9BXJ1 281 aa16.35■□□□□ 0.21
TNFSF11-201ENST00000239849 EYSQ5T1H1 3165 aa16.35■□□□□ 0.21
TNFSF11-201ENST00000239849 TTC28Q96AY4 2481 aa16.34■□□□□ 0.21
TNFSF11-201ENST00000239849 TRIM75PA6NK02 468 aa16.34■□□□□ 0.21
TNFSF11-201ENST00000239849 CTNND1O60716 968 aaKnown RBP16.34■□□□□ 0.21
TNFSF11-201ENST00000239849 ZKSCAN1P17029 563 aaPredicted RBP16.34■□□□□ 0.21
TNFSF11-201ENST00000239849 NUDT12Q9BQG2 462 aa16.34■□□□□ 0.21
TNFSF11-201ENST00000239849 TTYH1Q9H313 450 aaPredicted RBP16.34■□□□□ 0.21
TNFSF11-201ENST00000239849 SYNGAP1Q96PV0 1343 aa16.34■□□□□ 0.21
TNFSF11-201ENST00000239849 PHF20L1A8MW92 1017 aa16.33■□□□□ 0.2
TNFSF11-201ENST00000239849 PDE3AQ14432 1141 aa16.33■□□□□ 0.2
TNFSF11-201ENST00000239849 SHHQ15465 462 aa16.33■□□□□ 0.2
TNFSF11-201ENST00000239849 IL27Q8NEV9 243 aa16.33■□□□□ 0.2
TNFSF11-201ENST00000239849 ZNF594Q96JF6 807 aaPredicted RBP16.33■□□□□ 0.2
TNFSF11-201ENST00000239849 TBC1D2Q9BYX2 928 aa16.33■□□□□ 0.2
TNFSF11-201ENST00000239849 IQSEC3Q9UPP2 1182 aaPredicted RBP16.33■□□□□ 0.2
TNFSF11-201ENST00000239849 SLC4A2P04920 1241 aa16.32■□□□□ 0.2
TNFSF11-201ENST00000239849 CYP2B6P20813 491 aa16.32■□□□□ 0.2
TNFSF11-201ENST00000239849 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
TNFSF11-201ENST00000239849 FKBP5Q13451 457 aaPredicted RBP16.32■□□□□ 0.2
TNFSF11-201ENST00000239849 LHX8Q68G74 356 aa16.32■□□□□ 0.2
TNFSF11-201ENST00000239849 SENP6Q9GZR1 1112 aaPredicted RBP16.32■□□□□ 0.2
TNFSF11-201ENST00000239849 HCN4Q9Y3Q4 1203 aa16.32■□□□□ 0.2
TNFSF11-201ENST00000239849 MSCO60682 206 aa16.31■□□□□ 0.2
TNFSF11-201ENST00000239849 FLIIQ13045 1269 aa16.31■□□□□ 0.2
TNFSF11-201ENST00000239849 CDC42EP5Q6NZY7 148 aa16.31■□□□□ 0.2
TNFSF11-201ENST00000239849 WDR66Q8TBY9 1149 aa16.31■□□□□ 0.2
TNFSF11-201ENST00000239849 MORF4L1Q9UBU8 362 aa16.31■□□□□ 0.2
TNFSF11-201ENST00000239849 KIF16BQ96L93 1317 aa16.3■□□□□ 0.2
TNFSF11-201ENST00000239849 ENTPD3O75355 529 aa16.3■□□□□ 0.2
TNFSF11-201ENST00000239849 CACNB2Q08289 660 aaPredicted RBP16.3■□□□□ 0.2
TNFSF11-201ENST00000239849 NFIAQ12857 509 aa16.3■□□□□ 0.2
TNFSF11-201ENST00000239849 TREML2Q5T2D2 321 aa16.3■□□□□ 0.2
TNFSF11-201ENST00000239849 ATRNL1Q5VV63 1379 aa16.29■□□□□ 0.2
TNFSF11-201ENST00000239849 RGS2P41220 211 aa16.29■□□□□ 0.2
TNFSF11-201ENST00000239849 MAP3K10Q02779 954 aa16.29■□□□□ 0.2
TNFSF11-201ENST00000239849 CCAR1Q8IX12 1150 aaKnown RBP16.29■□□□□ 0.2
TNFSF11-201ENST00000239849 ADAMTS19Q8TE59 1207 aa16.29■□□□□ 0.2
TNFSF11-201ENST00000239849 ASB2Q96Q27 587 aa16.29■□□□□ 0.2
TNFSF11-201ENST00000239849 UHRF1Q96T88 793 aaPredicted RBP16.29■□□□□ 0.2
TNFSF11-201ENST00000239849 USP40Q9NVE5 1235 aa16.29■□□□□ 0.2
TNFSF11-201ENST00000239849 THEGQ9P2T0 379 aa16.29■□□□□ 0.2
TNFSF11-201ENST00000239849 FAM198AQ9UFP1 575 aa16.29■□□□□ 0.2
TNFSF11-201ENST00000239849 DAGLAQ9Y4D2 1042 aa16.29■□□□□ 0.2
TNFSF11-201ENST00000239849 PRUNE2Q8WUY3 3088 aa16.28■□□□□ 0.2
TNFSF11-201ENST00000239849 DNM1LO00429 736 aa16.28■□□□□ 0.2
TNFSF11-201ENST00000239849 MAPK4P31152 587 aa16.28■□□□□ 0.2
TNFSF11-201ENST00000239849 MRPS5P82675 430 aaKnown RBP16.28■□□□□ 0.2
TNFSF11-201ENST00000239849 C9orf50Q5SZB4 431 aa16.28■□□□□ 0.2
TNFSF11-201ENST00000239849 G2E3Q7L622 706 aa16.28■□□□□ 0.2
TNFSF11-201ENST00000239849 ZSCAN29Q8IWY8 852 aaPredicted RBP16.28■□□□□ 0.2
TNFSF11-201ENST00000239849 TSPYL6Q8N831 410 aa16.28■□□□□ 0.2
TNFSF11-201ENST00000239849 CCND3P30281 292 aaPredicted RBP16.27■□□□□ 0.2
TNFSF11-201ENST00000239849 RTP1P59025 263 aa16.27■□□□□ 0.2
TNFSF11-201ENST00000239849 IDI2Q9BXS1 227 aa16.27■□□□□ 0.2
TNFSF11-201ENST00000239849 ASCC2Q9H1I8 757 aaPredicted RBP16.27■□□□□ 0.2
TNFSF11-201ENST00000239849 MAST2Q6P0Q8 1798 aa16.26■□□□□ 0.19
TNFSF11-201ENST00000239849 GRM8O00222 908 aa16.26■□□□□ 0.19
TNFSF11-201ENST00000239849 IFIT1P09914 478 aaKnown RBP16.26■□□□□ 0.19
TNFSF11-201ENST00000239849 ATN1P54259 1190 aaPredicted RBP16.26■□□□□ 0.19
TNFSF11-201ENST00000239849 TWISTNBQ3B726 338 aaPredicted RBP16.26■□□□□ 0.19
TNFSF11-201ENST00000239849 METTL24Q5JXM2 366 aa16.26■□□□□ 0.19
TNFSF11-201ENST00000239849 ZNF280CQ8ND82 737 aa16.26■□□□□ 0.19
TNFSF11-201ENST00000239849 GPRC5AQ8NFJ5 357 aa16.26■□□□□ 0.19
TNFSF11-201ENST00000239849 LPAR1Q92633 364 aa16.26■□□□□ 0.19
TNFSF11-201ENST00000239849 GAS2L1Q99501 681 aaPredicted RBP16.26■□□□□ 0.19
TNFSF11-201ENST00000239849 APBA2Q99767 749 aa16.26■□□□□ 0.19
TNFSF11-201ENST00000239849 ADAMTS8Q9UP79 889 aa16.26■□□□□ 0.19
TNFSF11-201ENST00000239849 ATP11BQ9Y2G3 1177 aa16.26■□□□□ 0.19
TNFSF11-201ENST00000239849 CDH23Q9H251 3354 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms