RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 SPDYE2BA6NHP3 402 aa13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 CPLX1O14810 134 aa13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 SPDYE6P0CI01 402 aa13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 YY1P25490 414 aa13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 PPP4R3BQ5MIZ7 849 aa13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 CREB3L3Q68CJ9 461 aa13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 NEK1Q96PY6 1258 aa13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 PICK1Q9NRD5 415 aa13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 PI4KBQ9UBF8 816 aa13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 PPARAQ07869 468 aa13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 USP48Q86UV5 1035 aa13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 TNRC6CQ9HCJ0 1690 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 IFIT3O14879 490 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 RABEP1Q15276 862 aa13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 RPAP1Q9BWH6 1393 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP3-201ENST00000237289 MRIQ9BWK5 157 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 STX8Q9UNK0 236 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 PPP4CP60510 307 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 CCDC178Q5BJE1 867 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 TUBGCP6Q96RT7 1819 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 RASA3Q14644 834 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 NBPF9Q3BBW0 867 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 C8orf34Q49A92 452 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 GIMAP6Q6P9H5 292 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 USP50Q70EL3 339 aaPredicted RBP13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 PDRG1Q9NUG6 133 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 SERPINB13Q9UIV8 391 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 CSADQ9Y600 493 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 PRDM1O75626 825 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 ANKRD1Q15327 319 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 GRIK5Q16478 980 aa13.12□□□□□ -0.31
TNFAIP3-201ENST00000237289 SLX4Q8IY92 1834 aa13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 WNT10BO00744 389 aa13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 MCM5P33992 734 aa13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 PTH1RQ03431 593 aa13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 GRM1Q13255 1194 aa13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 VPS53Q5VIR6 699 aa13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 FOXP4Q8IVH2 680 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 CHGBP05060 677 aa13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 RAB3GAP1Q15042 981 aa13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 NUP133Q8WUM0 1156 aa13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 FAM163AQ96GL9 167 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 DCP1AQ9NPI6 582 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 ENTPD3O75355 529 aa13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 CDC37L1Q7L3B6 337 aa13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 USP26Q9BXU7 913 aa13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 UPF3BQ9BZI7 483 aaKnown RBP13.11□□□□□ -0.31
TNFAIP3-201ENST00000237289 ARMC9Q7Z3E5 817 aa13.1□□□□□ -0.31
TNFAIP3-201ENST00000237289 DDX60Q8IY21 1712 aaKnown RBP13.1□□□□□ -0.31
TNFAIP3-201ENST00000237289 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
TNFAIP3-201ENST00000237289 TMEM67Q5HYA8 995 aa13.1□□□□□ -0.31
TNFAIP3-201ENST00000237289 AKNAD1Q5T1N1 836 aa13.1□□□□□ -0.31
TNFAIP3-201ENST00000237289 MIGA2Q7L4E1 593 aa13.1□□□□□ -0.31
TNFAIP3-201ENST00000237289 SLC27A2O14975 620 aa13.1□□□□□ -0.31
TNFAIP3-201ENST00000237289 DEFB129Q9H1M3 183 aa13.1□□□□□ -0.31
TNFAIP3-201ENST00000237289 SWAP70Q9UH65 585 aa13.1□□□□□ -0.31
TNFAIP3-201ENST00000237289 EPB41L2O43491 1005 aaKnown RBP13.1□□□□□ -0.31
TNFAIP3-201ENST00000237289 CERKLQ49MI3 558 aaPredicted RBP13.1□□□□□ -0.31
TNFAIP3-201ENST00000237289 FAM151AQ8WW52 585 aa13.1□□□□□ -0.31
TNFAIP3-201ENST00000237289 QSER1Q2KHR3 1735 aa13.09□□□□□ -0.31
TNFAIP3-201ENST00000237289 KDM4AO75164 1064 aa13.09□□□□□ -0.31
TNFAIP3-201ENST00000237289 MAP4K1Q92918 833 aa13.09□□□□□ -0.31
TNFAIP3-201ENST00000237289 KAT14Q9H8E8 782 aa13.09□□□□□ -0.31
TNFAIP3-201ENST00000237289 IREB2P48200 963 aaKnown RBP13.09□□□□□ -0.31
TNFAIP3-201ENST00000237289 ANAPC15P60006 121 aa13.09□□□□□ -0.31
TNFAIP3-201ENST00000237289 OSBPL5Q9H0X9 879 aaPredicted RBP13.09□□□□□ -0.31
TNFAIP3-201ENST00000237289 KIF3AQ9Y496 699 aa13.09□□□□□ -0.31
TNFAIP3-201ENST00000237289 GSG1L2A8MUP6 293 aa13.09□□□□□ -0.31
TNFAIP3-201ENST00000237289 APOBEC3HQ6NTF7 200 aaKnown RBP13.09□□□□□ -0.31
TNFAIP3-201ENST00000237289 B4E1Z4 1266 aa13.08□□□□□ -0.31
TNFAIP3-201ENST00000237289 C2orf69Q8N8R5 385 aa13.08□□□□□ -0.31
TNFAIP3-201ENST00000237289 CWC22Q9HCG8 908 aaKnown RBP13.08□□□□□ -0.31
TNFAIP3-201ENST00000237289 SCAF8Q9UPN6 1271 aaKnown RBP13.08□□□□□ -0.31
TNFAIP3-201ENST00000237289 FLT1P17948 1338 aa13.08□□□□□ -0.31
TNFAIP3-201ENST00000237289 WTAPQ15007 396 aa13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 LSG1Q9H089 658 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 CYP2D7A0A087X1C5 515 aa13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 MCM2P49736 904 aa13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 TFAP4Q01664 338 aa13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 CATIPQ7Z7H3 387 aa13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 ADGRA1Q86SQ6 560 aa13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 TMTC2Q8N394 836 aa13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 CCDC17Q96LX7 622 aa13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 PCP11498 1178 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 IFIT1BQ5T764 474 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 SH2D4AQ9H788 454 aa13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 SLC12A7Q9Y666 1083 aa13.08□□□□□ -0.32
TNFAIP3-201ENST00000237289 GAKO14976 1311 aa13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 RIOK1Q9BRS2 568 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 ARHGEF10LQ9HCE6 1279 aa13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 TAF1P21675 1872 aa13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 N4BP2Q86UW6 1770 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 PRC1O43663 620 aa13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 SPRYD3Q8NCJ5 442 aa13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 TRPM4Q8TD43 1214 aa13.07□□□□□ -0.32
TNFAIP3-201ENST00000237289 TMEM39BQ9GZU3 492 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms