RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 SLC6A19Q695T7 634 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 OSBPL7Q9BZF2 842 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 TNKS2Q9H2K2 1166 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 ZCCHC17Q9NP64 241 aaKnown RBP4.98□□□□□ -1.61
CDH9-201ENST00000231021 ANKIB1Q9P2G1 1089 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.98□□□□□ -1.61
CDH9-201ENST00000231021 GTF2A1LQ9UNN4 478 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 RTCAO00442 366 aaKnown RBP4.98□□□□□ -1.61
CDH9-201ENST00000231021 SNPHO15079 494 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 SMAD7O15105 426 aaKnown RBP4.98□□□□□ -1.61
CDH9-201ENST00000231021 MBD4O95243 580 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 SEC24BO95487 1268 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 CD4P01730 458 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 KRT20P35900 424 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 EIF1AXP47813 144 aaKnown RBP4.98□□□□□ -1.61
CDH9-201ENST00000231021 FXNQ16595 210 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 ABCB5Q2M3G0 1257 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 C1orf122Q6ZSJ8 110 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 CENPQQ7L2Z9 268 aaPredicted RBP4.98□□□□□ -1.61
CDH9-201ENST00000231021 RSRC2Q7L4I2 434 aaKnown RBP4.98□□□□□ -1.61
CDH9-201ENST00000231021 DNAJB7Q7Z6W7 309 aaPredicted RBP4.98□□□□□ -1.61
CDH9-201ENST00000231021 HOMER1Q86YM7 354 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 NAT8LQ8N9F0 302 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 PHC3Q8NDX5 983 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 NSUN6Q8TEA1 469 aaKnown RBP4.98□□□□□ -1.61
CDH9-201ENST00000231021 DCAF11Q8TEB1 546 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 BAP1Q92560 729 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 GOLGA1Q92805 767 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 NUDT16Q96DE0 195 aaKnown RBP4.98□□□□□ -1.61
CDH9-201ENST00000231021 TRMT1Q9NXH9 659 aaKnown RBP4.98□□□□□ -1.61
CDH9-201ENST00000231021 ADAMTS1Q9UHI8 967 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 GTF2IRD1Q9UHL9 959 aa4.98□□□□□ -1.61
CDH9-201ENST00000231021 LRPPRCP42704 1394 aaKnown RBP4.98□□□□□ -1.61
CDH9-201ENST00000231021 ARHGAP35Q9NRY4 1499 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 PABPN1LA6NDY0 278 aaKnown RBP4.97□□□□□ -1.61
CDH9-201ENST00000231021 POTEB2H3BUK9 544 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 GYS1P13807 737 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 PLCB3Q01970 1234 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 EN1Q05925 392 aaPredicted RBP4.97□□□□□ -1.61
CDH9-201ENST00000231021 PUM3Q15397 648 aaKnown RBP4.97□□□□□ -1.61
CDH9-201ENST00000231021 RNF180Q86T96 592 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 VPS37DQ86XT2 251 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 MAGEB6Q8N7X4 407 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 ZNF496Q96IT1 587 aaPredicted RBP4.97□□□□□ -1.61
CDH9-201ENST00000231021 SIN3AQ96ST3 1273 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 CSRNP2Q9H175 543 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 BLOC1S4Q9NUP1 217 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 UBP1Q9NZI7 540 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 FAM198AQ9UFP1 575 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 BRD4O60885 1362 aaPredicted RBP4.97□□□□□ -1.61
CDH9-201ENST00000231021 FMN1Q68DA7 1419 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 TNKSO95271 1327 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 F5H423 210 aaPredicted RBP4.97□□□□□ -1.61
CDH9-201ENST00000231021 MAP3K6O95382 1288 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 ATP1A3P13637 1013 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 ZSCAN20P17040 1043 aaPredicted RBP4.97□□□□□ -1.61
CDH9-201ENST00000231021 POLR2BP30876 1174 aaKnown RBP4.97□□□□□ -1.61
CDH9-201ENST00000231021 ID4P47928 161 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 SEPHS1P49903 392 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 ZNF132P52740 706 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 SKOR2Q2VWA4 1001 aaPredicted RBP4.97□□□□□ -1.61
CDH9-201ENST00000231021 NBPF8Q3BBV2 869 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 RC3H1Q5TC82 1133 aaKnown RBP4.97□□□□□ -1.61
CDH9-201ENST00000231021 TSHZ3Q63HK5 1081 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 CDCA2Q69YH5 1023 aaPredicted RBP4.97□□□□□ -1.61
CDH9-201ENST00000231021 PDCD7Q8N8D1 485 aaKnown RBP4.97□□□□□ -1.61
CDH9-201ENST00000231021 GIMAP8Q8ND71 665 aaPredicted RBP4.97□□□□□ -1.61
CDH9-201ENST00000231021 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.97□□□□□ -1.61
CDH9-201ENST00000231021 ZBTB3Q9H5J0 574 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 ATG3Q9NT62 314 aa4.97□□□□□ -1.61
CDH9-201ENST00000231021 SNAPC4Q5SXM2 1469 aa4.96□□□□□ -1.61
CDH9-201ENST00000231021 EIF3AQ14152 1382 aaKnown RBP4.96□□□□□ -1.61
CDH9-201ENST00000231021 FBXO24O75426 580 aa4.96□□□□□ -1.61
CDH9-201ENST00000231021 KIF20AO95235 890 aa4.96□□□□□ -1.61
CDH9-201ENST00000231021 GNA15P30679 374 aa4.96□□□□□ -1.61
CDH9-201ENST00000231021 C8orf34Q49A92 452 aa4.96□□□□□ -1.61
CDH9-201ENST00000231021 ANKRD45Q5TZF3 282 aa4.96□□□□□ -1.61
CDH9-201ENST00000231021 MMS22LQ6ZRQ5 1243 aa4.96□□□□□ -1.61
CDH9-201ENST00000231021 SRLQ86TD4 932 aa4.96□□□□□ -1.61
CDH9-201ENST00000231021 PLD6Q8N2A8 252 aaKnown RBP4.96□□□□□ -1.61
CDH9-201ENST00000231021 TRIM44Q96DX7 344 aaPredicted RBP4.96□□□□□ -1.61
CDH9-201ENST00000231021 ZMAT2Q96NC0 199 aaKnown RBP4.96□□□□□ -1.61
CDH9-201ENST00000231021 C2orf49Q9BVC5 232 aaPredicted RBP4.96□□□□□ -1.61
CDH9-201ENST00000231021 SMOC1Q9H4F8 434 aa4.96□□□□□ -1.61
CDH9-201ENST00000231021 AAASQ9NRG9 546 aa4.96□□□□□ -1.61
CDH9-201ENST00000231021 DNAAF2Q9NVR5 837 aaKnown RBP4.96□□□□□ -1.61
CDH9-201ENST00000231021 FBXO10Q9UK96 956 aa4.96□□□□□ -1.61
CDH9-201ENST00000231021 HECW1Q76N89 1606 aa4.96□□□□□ -1.62
CDH9-201ENST00000231021 ESPNB1AK53 854 aa4.96□□□□□ -1.62
CDH9-201ENST00000231021 GABRDO14764 452 aa4.96□□□□□ -1.62
CDH9-201ENST00000231021 BAIAP3O94812 1187 aa4.96□□□□□ -1.62
CDH9-201ENST00000231021 POTEJP0CG39 1038 aa4.96□□□□□ -1.62
CDH9-201ENST00000231021 HSPA5P11021 654 aaKnown RBP4.96□□□□□ -1.62
CDH9-201ENST00000231021 HPDP32754 393 aaPredicted RBP4.96□□□□□ -1.62
CDH9-201ENST00000231021 CRKP46108 304 aa4.96□□□□□ -1.62
CDH9-201ENST00000231021 INHBEP58166 350 aa4.96□□□□□ -1.62
CDH9-201ENST00000231021 OXLD1Q5BKU9 147 aa4.96□□□□□ -1.62
CDH9-201ENST00000231021 TBCELQ5QJ74 424 aa4.96□□□□□ -1.62
CDH9-201ENST00000231021 SOGA3Q5TF21 947 aa4.96□□□□□ -1.62
CDH9-201ENST00000231021 NUGGCQ68CJ6 796 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms