RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 SMARCC1Q92922 1105 aaPredicted RBP11.78□□□□□ -0.52
MCM3-201ENST00000229854 GJB4Q9NTQ9 266 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 ABCA3Q99758 1704 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 CTAGE15A4D2H0 777 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 CTAGE8P0CG41 777 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 ATP6V1AP38606 617 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 CCT5P48643 541 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 AKAP17AQ02040 695 aaKnown RBP11.78□□□□□ -0.52
MCM3-201ENST00000229854 USPL1Q5W0Q7 1092 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 SPECC1LQ69YQ0 1117 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 CTAGE6Q86UF2 777 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 CTAGE4Q8IX94 777 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 YEATS4O95619 227 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 SWT1Q5T5J6 900 aaKnown RBP11.78□□□□□ -0.52
MCM3-201ENST00000229854 FBXW10Q5XX13 1052 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 RAB11FIP4Q86YS3 637 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 MSANTD4Q8NCY6 345 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 LINS1Q8NG48 757 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 GDAP1L1Q96MZ0 367 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 CEP89Q96ST8 783 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 MED4Q9NPJ6 270 aa11.78□□□□□ -0.52
MCM3-201ENST00000229854 DDX21Q9NR30 783 aaKnown RBP eCLIP11.78□□□□□ -0.52
MCM3-201ENST00000229854 CARMIL3Q8ND23 1372 aa11.77□□□□□ -0.52
MCM3-201ENST00000229854 CTAGE9A4FU28 777 aa11.77□□□□□ -0.53
MCM3-201ENST00000229854 CPP00450 1065 aa11.77□□□□□ -0.53
MCM3-201ENST00000229854 KAT2BQ92831 832 aa11.77□□□□□ -0.53
MCM3-201ENST00000229854 FAM107BQ9H098 131 aa11.77□□□□□ -0.53
MCM3-201ENST00000229854 CMA1P23946 247 aa11.77□□□□□ -0.53
MCM3-201ENST00000229854 MYSM1Q5VVJ2 828 aa11.77□□□□□ -0.53
MCM3-201ENST00000229854 ANO1Q5XXA6 986 aa11.77□□□□□ -0.53
MCM3-201ENST00000229854 HMGB1P09429 215 aaKnown RBP11.76□□□□□ -0.53
MCM3-201ENST00000229854 PDIA3P30101 505 aaKnown RBP11.76□□□□□ -0.53
MCM3-201ENST00000229854 HNRNPH1P31943 449 aaKnown RBP11.76□□□□□ -0.53
MCM3-201ENST00000229854 RIN2Q8WYP3 895 aaPredicted RBP11.76□□□□□ -0.53
MCM3-201ENST00000229854 CLIC6Q96NY7 704 aa11.76□□□□□ -0.53
MCM3-201ENST00000229854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.76□□□□□ -0.538e-7■□□□□ 11
MCM3-201ENST00000229854 SUFUQ9UMX1 484 aa11.76□□□□□ -0.53
MCM3-201ENST00000229854 GRM8O00222 908 aa11.76□□□□□ -0.53
MCM3-201ENST00000229854 EXOC5O00471 708 aa11.76□□□□□ -0.53
MCM3-201ENST00000229854 IGKV5-2P06315 115 aa11.76□□□□□ -0.53
MCM3-201ENST00000229854 KRT28Q7Z3Y7 464 aa11.76□□□□□ -0.53
MCM3-201ENST00000229854 TRMT44Q8IYL2 757 aaKnown RBP11.76□□□□□ -0.53
MCM3-201ENST00000229854 SLC35F6Q8N357 371 aa11.76□□□□□ -0.53
MCM3-201ENST00000229854 SUCLG2Q96I99 432 aa11.76□□□□□ -0.53
MCM3-201ENST00000229854 POLR3EQ9NVU0 708 aa11.76□□□□□ -0.53
MCM3-201ENST00000229854 MROH7-TTC4A0A0A0MT08 1334 aa11.76□□□□□ -0.53
MCM3-201ENST00000229854 LAMA4Q16363 1823 aa11.76□□□□□ -0.53
MCM3-201ENST00000229854 EBAG9O00559 213 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 FDPSP14324 419 aaKnown RBP11.75□□□□□ -0.53
MCM3-201ENST00000229854 PDE4BQ07343 736 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 TBX2Q13207 712 aaPredicted RBP11.75□□□□□ -0.53
MCM3-201ENST00000229854 MCMDC2Q4G0Z9 681 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 DDX46Q7L014 1031 aaKnown RBP11.75□□□□□ -0.53
MCM3-201ENST00000229854 FAM212AQ96EL1 285 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 SLC52A2Q9HAB3 445 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 MYH15Q9Y2K3 1946 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 USP8P40818 1118 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 IGSF22Q8N9C0 903 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 NOA1Q8NC60 698 aaKnown RBP11.75□□□□□ -0.53
MCM3-201ENST00000229854 CDC5LQ99459 802 aaKnown RBP11.75□□□□□ -0.53
MCM3-201ENST00000229854 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.75□□□□□ -0.53
MCM3-201ENST00000229854 C19orf44Q9H6X5 657 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 NFE2L3Q9Y4A8 694 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 FAM169AQ9Y6X4 670 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 AKR1B15C9JRZ8 316 aaPredicted RBP11.75□□□□□ -0.53
MCM3-201ENST00000229854 GSCP56915 257 aaPredicted RBP11.75□□□□□ -0.53
MCM3-201ENST00000229854 SETQ01105 290 aaPredicted RBP11.75□□□□□ -0.53
MCM3-201ENST00000229854 PPFIBP1Q86W92 1011 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
MCM3-201ENST00000229854 DONSONQ9NYP3 566 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 TUBE1Q9UJT0 475 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 PCDHA5Q9Y5H7 936 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 ADGRG1Q9Y653 693 aa11.75□□□□□ -0.53
MCM3-201ENST00000229854 A0A0G2JLW4 131 aa11.74□□□□□ -0.53
MCM3-201ENST00000229854 PHKG2P15735 406 aa11.74□□□□□ -0.53
MCM3-201ENST00000229854 ZNF790Q6PG37 636 aa11.74□□□□□ -0.53
MCM3-201ENST00000229854 RAD9BQ6WBX8 426 aa11.74□□□□□ -0.53
MCM3-201ENST00000229854 RAI14Q9P0K7 980 aa11.74□□□□□ -0.53
MCM3-201ENST00000229854 TMEM94Q12767 1356 aa11.74□□□□□ -0.53
MCM3-201ENST00000229854 CPLX1O14810 134 aa11.74□□□□□ -0.53
MCM3-201ENST00000229854 CDC27P30260 824 aa11.74□□□□□ -0.53
MCM3-201ENST00000229854 MSL3Q8N5Y2 521 aaKnown RBP11.74□□□□□ -0.53
MCM3-201ENST00000229854 ZNF622Q969S3 477 aaKnown RBP eCLIP11.74□□□□□ -0.532e-9■■□□□ 12.5
MCM3-201ENST00000229854 HOOK1Q9UJC3 728 aaKnown RBP11.74□□□□□ -0.53
MCM3-201ENST00000229854 CPDO75976 1380 aa11.74□□□□□ -0.53
MCM3-201ENST00000229854 TNS3Q68CZ2 1445 aa11.74□□□□□ -0.53
MCM3-201ENST00000229854 DDX60Q8IY21 1712 aaKnown RBP11.74□□□□□ -0.53
MCM3-201ENST00000229854 KIF28PB7ZC32 967 aa11.73□□□□□ -0.53
MCM3-201ENST00000229854 H0YHG0 523 aa11.73□□□□□ -0.53
MCM3-201ENST00000229854 SYF2O95926 243 aaKnown RBP11.73□□□□□ -0.53
MCM3-201ENST00000229854 PIP4K2BP78356 416 aa11.73□□□□□ -0.53
MCM3-201ENST00000229854 NCAPH2Q6IBW4 605 aa11.73□□□□□ -0.53
MCM3-201ENST00000229854 CCDC148Q8NFR7 591 aa11.73□□□□□ -0.53
MCM3-201ENST00000229854 KCPQ6ZWJ8 1503 aa11.73□□□□□ -0.53
MCM3-201ENST00000229854 SALL1Q9NSC2 1324 aa11.73□□□□□ -0.53
MCM3-201ENST00000229854 INPP5BP32019 993 aa11.73□□□□□ -0.53
MCM3-201ENST00000229854 TDO2P48775 406 aa11.73□□□□□ -0.53
MCM3-201ENST00000229854 AIMP1Q12904 312 aaKnown RBP11.73□□□□□ -0.53
MCM3-201ENST00000229854 ZNF827Q17R98 1081 aa11.73□□□□□ -0.53
MCM3-201ENST00000229854 CTCFLQ8NI51 663 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms