RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 RRP12Q5JTH9 1297 aaKnown RBP20.57■□□□□ 0.88
GCDH-201ENST00000222214 TXNRD3Q86VQ6 643 aa20.57■□□□□ 0.88
GCDH-201ENST00000222214 MICU3Q86XE3 530 aa20.57■□□□□ 0.88
GCDH-201ENST00000222214 UBAC1Q9BSL1 405 aa20.57■□□□□ 0.88
GCDH-201ENST00000222214 MINDY4BA8MYZ0 360 aa20.56■□□□□ 0.88
GCDH-201ENST00000222214 FGRP09769 529 aa20.56■□□□□ 0.88
GCDH-201ENST00000222214 DYNLL1P63167 89 aaKnown RBP20.56■□□□□ 0.88
GCDH-201ENST00000222214 GSTO1P78417 241 aa20.56■□□□□ 0.88
GCDH-201ENST00000222214 DZIP1Q86YF9 867 aaKnown RBP20.56■□□□□ 0.88
GCDH-201ENST00000222214 NKX2-3Q8TAU0 364 aa20.56■□□□□ 0.88
GCDH-201ENST00000222214 TACC3Q9Y6A5 838 aa20.56■□□□□ 0.88
GCDH-201ENST00000222214 PRDX5P30044 214 aa20.55■□□□□ 0.88
GCDH-201ENST00000222214 CERS3Q8IU89 383 aa20.55■□□□□ 0.88
GCDH-201ENST00000222214 PROM2Q8N271 834 aa20.55■□□□□ 0.88
GCDH-201ENST00000222214 FLAD1Q8NFF5 587 aa20.55■□□□□ 0.88
GCDH-201ENST00000222214 WASF1Q92558 559 aa20.55■□□□□ 0.88
GCDH-201ENST00000222214 INCENPQ9NQS7 918 aa20.55■□□□□ 0.88
GCDH-201ENST00000222214 PODXL2Q9NZ53 605 aa20.55■□□□□ 0.88
GCDH-201ENST00000222214 LDHBP07195 334 aaKnown RBP20.55■□□□□ 0.88
GCDH-201ENST00000222214 SLC3A2P08195 630 aaKnown RBP20.55■□□□□ 0.88
GCDH-201ENST00000222214 IARSP41252 1262 aaKnown RBP20.55■□□□□ 0.88
GCDH-201ENST00000222214 NLGN1Q8N2Q7 840 aa20.55■□□□□ 0.88
GCDH-201ENST00000222214 ARPP21Q9UBL0 812 aaPredicted RBP20.55■□□□□ 0.88
GCDH-201ENST00000222214 LAMB1P07942 1786 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 FOSBP53539 338 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 DDR1Q08345 913 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 UVSSAQ2YD98 709 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 SBK1Q52WX2 424 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 TRIM44Q96DX7 344 aaPredicted RBP20.54■□□□□ 0.88
GCDH-201ENST00000222214 NUP62CLQ9H1M0 184 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 GGA1Q9UJY5 639 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 IFNAR1P17181 557 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 CDC27P30260 824 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 GUCY1B3Q02153 619 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 NTRK3Q16288 839 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 RAB11FIP4Q86YS3 637 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 BICD2Q8TD16 824 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 ALG1Q9BT22 464 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 SENP2Q9HC62 589 aa20.54■□□□□ 0.88
GCDH-201ENST00000222214 BAZ2AQ9UIF9 1905 aaKnown RBP20.53■□□□□ 0.88
GCDH-201ENST00000222214 GPSM2P81274 684 aa20.53■□□□□ 0.88
GCDH-201ENST00000222214 CTR9Q6PD62 1173 aa20.53■□□□□ 0.88
GCDH-201ENST00000222214 IQCA1Q86XH1 822 aa20.53■□□□□ 0.88
GCDH-201ENST00000222214 FAM43AQ8N2R8 423 aa20.53■□□□□ 0.88
GCDH-201ENST00000222214 AATFQ9NY61 560 aaKnown RBP eCLIP20.53■□□□□ 0.88
GCDH-201ENST00000222214 RTEL1Q9NZ71 1219 aa20.53■□□□□ 0.88
GCDH-201ENST00000222214 LRRC37AA6NMS7 1700 aa20.52■□□□□ 0.88
GCDH-201ENST00000222214 UFL1O94874 794 aa20.52■□□□□ 0.88
GCDH-201ENST00000222214 LDHCP07864 332 aa20.52■□□□□ 0.88
GCDH-201ENST00000222214 SSRP1Q08945 709 aaKnown RBP20.52■□□□□ 0.88
GCDH-201ENST00000222214 TRIM29Q14134 588 aa20.52■□□□□ 0.88
GCDH-201ENST00000222214 PGBD1Q96JS3 809 aa20.52■□□□□ 0.88
GCDH-201ENST00000222214 USP28Q96RU2 1077 aa20.52■□□□□ 0.88
GCDH-201ENST00000222214 DCP1AQ9NPI6 582 aaPredicted RBP20.52■□□□□ 0.88
GCDH-201ENST00000222214 FAM217BQ9NTX9 383 aaPredicted RBP20.52■□□□□ 0.88
GCDH-201ENST00000222214 ORC4O43929 436 aa20.52■□□□□ 0.87
GCDH-201ENST00000222214 MAP3K11Q16584 847 aa20.52■□□□□ 0.87
GCDH-201ENST00000222214 RTN1Q16799 776 aa20.52■□□□□ 0.87
GCDH-201ENST00000222214 TPRNQ4KMQ1 711 aa20.52■□□□□ 0.87
GCDH-201ENST00000222214 ILDR1Q86SU0 546 aaPredicted RBP20.52■□□□□ 0.87
GCDH-201ENST00000222214 TRIM22Q8IYM9 498 aa20.52■□□□□ 0.87
GCDH-201ENST00000222214 NRXN2Q9P2S2 1712 aa20.51■□□□□ 0.87
GCDH-201ENST00000222214 USP17L12C9JPN9 530 aa20.51■□□□□ 0.87
GCDH-201ENST00000222214 USP17L21D6R901 530 aa20.51■□□□□ 0.87
GCDH-201ENST00000222214 PPFIA3O75145 1194 aa20.51■□□□□ 0.87
GCDH-201ENST00000222214 FMNL1O95466 1100 aaPredicted RBP20.51■□□□□ 0.87
GCDH-201ENST00000222214 BAG3O95817 575 aa20.51■□□□□ 0.87
GCDH-201ENST00000222214 IL1R1P14778 569 aa20.51■□□□□ 0.87
GCDH-201ENST00000222214 LIG1P18858 919 aa20.51■□□□□ 0.87
GCDH-201ENST00000222214 SEC23AQ15436 765 aa20.51■□□□□ 0.87
GCDH-201ENST00000222214 AKT1S1Q96B36 256 aa20.51■□□□□ 0.87
GCDH-201ENST00000222214 NOL10Q9BSC4 688 aaKnown RBP20.51■□□□□ 0.87
GCDH-201ENST00000222214 FUCA2Q9BTY2 467 aa20.51■□□□□ 0.87
GCDH-201ENST00000222214 POLR3EQ9NVU0 708 aa20.51■□□□□ 0.87
GCDH-201ENST00000222214 DACT1Q9NYF0 836 aa20.51■□□□□ 0.87
GCDH-201ENST00000222214 TNKSO95271 1327 aa20.51■□□□□ 0.87
GCDH-201ENST00000222214 YEATS4O95619 227 aa20.5■□□□□ 0.87
GCDH-201ENST00000222214 CCDC192P0DO97 292 aa20.5■□□□□ 0.87
GCDH-201ENST00000222214 RXRAP19793 462 aa20.5■□□□□ 0.87
GCDH-201ENST00000222214 KIF23Q02241 960 aaPredicted RBP20.5■□□□□ 0.87
GCDH-201ENST00000222214 ZNF654Q8IZM8 581 aa20.5■□□□□ 0.87
GCDH-201ENST00000222214 ZSCAN10Q96SZ4 725 aaPredicted RBP20.5■□□□□ 0.87
GCDH-201ENST00000222214 PPP4CP60510 307 aa20.5■□□□□ 0.87
GCDH-201ENST00000222214 MYSM1Q5VVJ2 828 aa20.5■□□□□ 0.87
GCDH-201ENST00000222214 KCNG4Q8TDN1 519 aa20.5■□□□□ 0.87
GCDH-201ENST00000222214 PDLIM2Q96JY6 352 aa20.5■□□□□ 0.87
GCDH-201ENST00000222214 TNMDQ9H2S6 317 aa20.5■□□□□ 0.87
GCDH-201ENST00000222214 CLSTN2Q9H4D0 955 aa20.5■□□□□ 0.87
GCDH-201ENST00000222214 CD209Q9NNX6 404 aa20.5■□□□□ 0.87
GCDH-201ENST00000222214 DLEC1Q9Y238 1755 aa20.49■□□□□ 0.87
GCDH-201ENST00000222214 APBA3O96018 575 aa20.49■□□□□ 0.87
GCDH-201ENST00000222214 CALM1P0DP23 149 aa20.49■□□□□ 0.87
GCDH-201ENST00000222214 CALM2P0DP24 149 aa20.49■□□□□ 0.87
GCDH-201ENST00000222214 CALM3P0DP25 149 aa20.49■□□□□ 0.87
GCDH-201ENST00000222214 PDE4BQ07343 736 aa20.49■□□□□ 0.87
GCDH-201ENST00000222214 SP8Q8IXZ3 490 aa20.49■□□□□ 0.87
GCDH-201ENST00000222214 ZKSCAN3Q9BRR0 538 aa20.49■□□□□ 0.87
GCDH-201ENST00000222214 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.49■□□□□ 0.87
GCDH-201ENST00000222214 ECM29Q5VYK3 1845 aa20.49■□□□□ 0.87
GCDH-201ENST00000222214 KRT40Q6A162 431 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms