RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 ZHX2Q9Y6X8 837 aa19.58■□□□□ 0.72
NME3-201ENST00000219302 PDS5AQ29RF7 1337 aaKnown RBP19.57■□□□□ 0.72
NME3-201ENST00000219302 A0A0G2JLL6 359 aaPredicted RBP19.57■□□□□ 0.72
NME3-201ENST00000219302 DDTLA6NHG4 134 aaPredicted RBP19.57■□□□□ 0.72
NME3-201ENST00000219302 SLURP2P0DP57 97 aa19.57■□□□□ 0.72
NME3-201ENST00000219302 CYP2C8P10632 490 aa19.57■□□□□ 0.72
NME3-201ENST00000219302 GRK4P32298 578 aa19.57■□□□□ 0.72
NME3-201ENST00000219302 FXR1P51114 621 aaKnown RBP eCLIP19.57■□□□□ 0.72
NME3-201ENST00000219302 PRRT2Q7Z6L0 340 aaPredicted RBP19.57■□□□□ 0.72
NME3-201ENST00000219302 PARK7Q99497 189 aaKnown RBP19.57■□□□□ 0.72
NME3-201ENST00000219302 DDX4Q9NQI0 724 aaKnown RBP19.57■□□□□ 0.72
NME3-201ENST00000219302 COLQQ9Y215 455 aaPredicted RBP19.57■□□□□ 0.72
NME3-201ENST00000219302 FASTKD5Q7L8L6 764 aaKnown RBP19.56■□□□□ 0.72
NME3-201ENST00000219302 RAET1EQ8TD07 263 aa19.56■□□□□ 0.72
NME3-201ENST00000219302 ABCF2Q9UG63 623 aa19.56■□□□□ 0.72
NME3-201ENST00000219302 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.56■□□□□ 0.72
NME3-201ENST00000219302 MYH2Q9UKX2 1941 aa19.56■□□□□ 0.72
NME3-201ENST00000219302 MYPNQ86TC9 1320 aa19.55■□□□□ 0.72
NME3-201ENST00000219302 A0A1B0GUL7 405 aa19.55■□□□□ 0.72
NME3-201ENST00000219302 H0YGN5 161 aa19.55■□□□□ 0.72
NME3-201ENST00000219302 RARSP54136 660 aaKnown RBP19.55■□□□□ 0.72
NME3-201ENST00000219302 UBE2Q1Q7Z7E8 422 aa19.55■□□□□ 0.72
NME3-201ENST00000219302 ZNF384Q8TF68 577 aa19.55■□□□□ 0.72
NME3-201ENST00000219302 XAGE2Q96GT9 111 aa19.55■□□□□ 0.72
NME3-201ENST00000219302 GPR75-ASB3A0A0A6YYF3 556 aa19.54■□□□□ 0.72
NME3-201ENST00000219302 CTNND1O60716 968 aaKnown RBP19.54■□□□□ 0.72
NME3-201ENST00000219302 GJB1P08034 283 aa19.54■□□□□ 0.72
NME3-201ENST00000219302 BTDP43251 543 aa19.54■□□□□ 0.72
NME3-201ENST00000219302 GJA8P48165 433 aa19.54■□□□□ 0.72
NME3-201ENST00000219302 RHBDL3P58872 404 aa19.54■□□□□ 0.72
NME3-201ENST00000219302 PRKCZQ05513 592 aa19.54■□□□□ 0.72
NME3-201ENST00000219302 TFCP2Q12800 502 aa19.54■□□□□ 0.72
NME3-201ENST00000219302 MTX1Q13505 466 aa19.54■□□□□ 0.72
NME3-201ENST00000219302 SPTY2D1Q68D10 685 aaPredicted RBP19.54■□□□□ 0.72
NME3-201ENST00000219302 DZIP1Q86YF9 867 aaKnown RBP19.54■□□□□ 0.72
NME3-201ENST00000219302 ZSCAN29Q8IWY8 852 aaPredicted RBP19.54■□□□□ 0.72
NME3-201ENST00000219302 SLF2Q8IX21 1173 aa19.54■□□□□ 0.72
NME3-201ENST00000219302 ARHGAP45Q92619 1136 aa19.54■□□□□ 0.72
NME3-201ENST00000219302 PICK1Q9NRD5 415 aa19.54■□□□□ 0.72
NME3-201ENST00000219302 SLC45A1Q9Y2W3 748 aa19.54■□□□□ 0.72
NME3-201ENST00000219302 FCGRTP55899 365 aa19.53■□□□□ 0.72
NME3-201ENST00000219302 NKX2-3Q8TAU0 364 aa19.53■□□□□ 0.72
NME3-201ENST00000219302 GABRQQ9UN88 632 aa19.53■□□□□ 0.72
NME3-201ENST00000219302 AKAP2Q9Y2D5 859 aa19.53■□□□□ 0.72
NME3-201ENST00000219302 MROH7-TTC4A0A0A0MT08 1334 aa19.52■□□□□ 0.72
NME3-201ENST00000219302 SRGAP3O43295 1099 aa19.52■□□□□ 0.72
NME3-201ENST00000219302 TBC1D12O60347 775 aa19.52■□□□□ 0.72
NME3-201ENST00000219302 NPM3O75607 178 aaKnown RBP19.52■□□□□ 0.72
NME3-201ENST00000219302 CCL5P13501 91 aa19.52■□□□□ 0.72
NME3-201ENST00000219302 MECOMQ03112 1051 aa19.52■□□□□ 0.72
NME3-201ENST00000219302 TRIOBPQ9H2D6 2365 aa19.51■□□□□ 0.71
NME3-201ENST00000219302 GNAI3P08754 354 aa19.51■□□□□ 0.71
NME3-201ENST00000219302 PICALMQ13492 652 aa19.51■□□□□ 0.71
NME3-201ENST00000219302 MVPQ14764 893 aaKnown RBP19.51■□□□□ 0.71
NME3-201ENST00000219302 GADL1Q6ZQY3 521 aa19.51■□□□□ 0.71
NME3-201ENST00000219302 ERICH6Q7L0X2 663 aa19.51■□□□□ 0.71
NME3-201ENST00000219302 RNF208Q9H0X6 261 aa19.51■□□□□ 0.71
NME3-201ENST00000219302 HMG20BQ9P0W2 317 aa19.51■□□□□ 0.71
NME3-201ENST00000219302 SLAIN1Q8ND83 568 aa19.5■□□□□ 0.71
NME3-201ENST00000219302 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.5■□□□□ 0.71
NME3-201ENST00000219302 DOCK2Q92608 1830 aa19.5■□□□□ 0.71
NME3-201ENST00000219302 UBXN2AP68543 259 aa19.49■□□□□ 0.71
NME3-201ENST00000219302 PI16Q6UXB8 463 aa19.49■□□□□ 0.71
NME3-201ENST00000219302 CCDC84Q86UT8 332 aaPredicted RBP19.49■□□□□ 0.71
NME3-201ENST00000219302 NSUN4Q96CB9 384 aaKnown RBP19.49■□□□□ 0.71
NME3-201ENST00000219302 BIN2Q9UBW5 565 aaPredicted RBP19.49■□□□□ 0.71
NME3-201ENST00000219302 PHIPQ8WWQ0 1821 aa19.48■□□□□ 0.71
NME3-201ENST00000219302 MGAMO43451 1857 aa19.48■□□□□ 0.71
NME3-201ENST00000219302 TRIM75PA6NK02 468 aa19.48■□□□□ 0.71
NME3-201ENST00000219302 MAP4K4O95819 1239 aaPredicted RBP19.48■□□□□ 0.71
NME3-201ENST00000219302 FLT3LGP49771 235 aa19.48■□□□□ 0.71
NME3-201ENST00000219302 IRF5Q13568 498 aa19.48■□□□□ 0.71
NME3-201ENST00000219302 TBC1D9Q6ZT07 1266 aa19.48■□□□□ 0.71
NME3-201ENST00000219302 SPATA5Q8NB90 893 aa19.48■□□□□ 0.71
NME3-201ENST00000219302 DPF3Q92784 378 aa19.48■□□□□ 0.71
NME3-201ENST00000219302 NEUROD6Q96NK8 337 aa19.48■□□□□ 0.71
NME3-201ENST00000219302 UNC93B1Q9H1C4 597 aa19.48■□□□□ 0.71
NME3-201ENST00000219302 AGTPBP1Q9UPW5 1226 aa19.48■□□□□ 0.71
NME3-201ENST00000219302 PTPRFP10586 1907 aa19.47■□□□□ 0.71
NME3-201ENST00000219302 FAM196BA6NMK8 535 aa19.47■□□□□ 0.71
NME3-201ENST00000219302 ADCY3O60266 1144 aa19.47■□□□□ 0.71
NME3-201ENST00000219302 LDHCP07864 332 aa19.47■□□□□ 0.71
NME3-201ENST00000219302 PXYLP1Q8TE99 480 aa19.47■□□□□ 0.71
NME3-201ENST00000219302 U2AF1L4Q8WU68 220 aaKnown RBP19.47■□□□□ 0.71
NME3-201ENST00000219302 DOCK3Q8IZD9 2030 aa19.46■□□□□ 0.71
NME3-201ENST00000219302 SGPL1O95470 568 aa19.46■□□□□ 0.71
NME3-201ENST00000219302 ARID4AP29374 1257 aaPredicted RBP19.46■□□□□ 0.71
NME3-201ENST00000219302 RRP1BQ14684 758 aaKnown RBP19.46■□□□□ 0.71
NME3-201ENST00000219302 TREML2Q5T2D2 321 aa19.46■□□□□ 0.71
NME3-201ENST00000219302 OSBPL5Q9H0X9 879 aaPredicted RBP19.46■□□□□ 0.71
NME3-201ENST00000219302 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.46■□□□□ 0.71
NME3-201ENST00000219302 TNNQ9UQP3 1299 aa19.46■□□□□ 0.71
NME3-201ENST00000219302 RANBP2P49792 3224 aaKnown RBP19.46■□□□□ 0.71
NME3-201ENST00000219302 PNMA6EA0A0J9YXQ4 647 aa19.45■□□□□ 0.7
NME3-201ENST00000219302 TNPO2O14787 897 aaKnown RBP19.45■□□□□ 0.7
NME3-201ENST00000219302 ELNP15502 786 aa19.45■□□□□ 0.7
NME3-201ENST00000219302 GSTO1P78417 241 aa19.45■□□□□ 0.7
NME3-201ENST00000219302 SPP2Q13103 211 aa19.45■□□□□ 0.7
NME3-201ENST00000219302 CHRDL2Q6WN34 429 aa19.45■□□□□ 0.7
NME3-201ENST00000219302 ANKRD13CQ8N6S4 541 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms