RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 NECAB1Q8N987 351 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 BANK1Q8NDB2 785 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 MPHOSPH8Q99549 860 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 USP21Q9UK80 565 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 COL4A1P02462 1669 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 E7EWF7 191 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 IGHMBP2P38935 993 aaKnown RBP12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 PSEN1P49768 467 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 WASHC4Q2M389 1173 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 GRIPAP1Q4V328 841 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 PRR7Q8TB68 274 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 DDX12PQ92771 950 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 CHMP4CQ96CF2 233 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 LLPHQ9BRT6 129 aaKnown RBP12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 GPCPD1Q9NPB8 672 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 RNF19AQ9NV58 838 aa12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 MAFBQ9Y5Q3 323 aaPredicted RBP12.45□□□□□ -0.42
APOBEC3D-201ENST00000216099 WDR19Q8NEZ3 1342 aa12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 FOXP2O15409 715 aa12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 PHKA1P46020 1223 aa12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 SF3B3Q15393 1217 aaKnown RBP12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 ZSCAN23Q3MJ62 389 aa12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 CAVIN1Q6NZI2 390 aaKnown RBP12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 CDC5LQ99459 802 aaKnown RBP12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 HMX1Q9NP08 348 aaPredicted RBP12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 KIAA1551Q9HCM1 1747 aa12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 PFKFB2O60825 505 aa12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 RPS6KA4O75676 772 aa12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 SLC10A5Q5PT55 438 aa12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 GAS2L3Q86XJ1 694 aa12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 TCEANC2Q96MN5 208 aa12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 UBR3Q6ZT12 1888 aa12.44□□□□□ -0.42
APOBEC3D-201ENST00000216099 ZMYM6O95789 1325 aa12.43□□□□□ -0.42
APOBEC3D-201ENST00000216099 MAST2Q6P0Q8 1798 aa12.43□□□□□ -0.42
APOBEC3D-201ENST00000216099 IMMTQ16891 758 aaKnown RBP12.43□□□□□ -0.42
APOBEC3D-201ENST00000216099 PI16Q6UXB8 463 aa12.43□□□□□ -0.42
APOBEC3D-201ENST00000216099 TINF2Q9BSI4 451 aa12.43□□□□□ -0.42
APOBEC3D-201ENST00000216099 PIH1D3Q9NQM4 214 aaKnown RBP12.43□□□□□ -0.42
APOBEC3D-201ENST00000216099 SEC31BQ9NQW1 1179 aa12.43□□□□□ -0.42
APOBEC3D-201ENST00000216099 GPAA1O43292 621 aa12.43□□□□□ -0.42
APOBEC3D-201ENST00000216099 BMS1Q14692 1282 aaKnown RBP12.43□□□□□ -0.42
APOBEC3D-201ENST00000216099 NOP9Q86U38 636 aaKnown RBP12.43□□□□□ -0.42
APOBEC3D-201ENST00000216099 SYAP1Q96A49 352 aaPredicted RBP12.43□□□□□ -0.42
APOBEC3D-201ENST00000216099 CHAMP1Q96JM3 812 aa12.43□□□□□ -0.42
APOBEC3D-201ENST00000216099 NARFQ9UHQ1 456 aa12.43□□□□□ -0.42
APOBEC3D-201ENST00000216099 CCDC88AQ3V6T2 1871 aa12.42□□□□□ -0.42
APOBEC3D-201ENST00000216099 TCRBV5S4A2TA0A5A2 114 aa12.42□□□□□ -0.42
APOBEC3D-201ENST00000216099 EVCP57679 992 aa12.42□□□□□ -0.42
APOBEC3D-201ENST00000216099 LARP1BQ659C4 914 aaKnown RBP12.42□□□□□ -0.42
APOBEC3D-201ENST00000216099 USP48Q86UV5 1035 aa12.42□□□□□ -0.42
APOBEC3D-201ENST00000216099 NT5DC4Q86YG4 428 aa12.42□□□□□ -0.42
APOBEC3D-201ENST00000216099 NYXQ9GZU5 481 aa12.42□□□□□ -0.42
APOBEC3D-201ENST00000216099 PUS7LQ9H0K6 701 aaKnown RBP12.42□□□□□ -0.42
APOBEC3D-201ENST00000216099 SPATA5Q8NB90 893 aa12.42□□□□□ -0.42
APOBEC3D-201ENST00000216099 SMARCC2Q8TAQ2 1214 aa12.42□□□□□ -0.42
APOBEC3D-201ENST00000216099 ZNF274Q96GC6 653 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3D-201ENST00000216099 CREBZFQ9NS37 354 aa12.42□□□□□ -0.42
APOBEC3D-201ENST00000216099 ECM29Q5VYK3 1845 aa12.41□□□□□ -0.42
APOBEC3D-201ENST00000216099 FAM177BA6PVY3 158 aa12.41□□□□□ -0.42
APOBEC3D-201ENST00000216099 PDE6AP16499 860 aa12.41□□□□□ -0.42
APOBEC3D-201ENST00000216099 ALX1Q15699 326 aa12.41□□□□□ -0.42
APOBEC3D-201ENST00000216099 SLC9C2Q5TAH2 1124 aa12.41□□□□□ -0.42
APOBEC3D-201ENST00000216099 BRF1Q92994 677 aa12.41□□□□□ -0.42
APOBEC3D-201ENST00000216099 BCL2L12Q9HB09 334 aa12.41□□□□□ -0.42
APOBEC3D-201ENST00000216099 BRWD3Q6RI45 1802 aa12.41□□□□□ -0.42
APOBEC3D-201ENST00000216099 FGAP02671 866 aa12.41□□□□□ -0.42
APOBEC3D-201ENST00000216099 PTGDRQ13258 359 aa12.41□□□□□ -0.42
APOBEC3D-201ENST00000216099 ERFEQ4G0M1 354 aa12.41□□□□□ -0.42
APOBEC3D-201ENST00000216099 TMEM63CQ9P1W3 806 aa12.41□□□□□ -0.42
APOBEC3D-201ENST00000216099 TNRC6CQ9HCJ0 1690 aaKnown RBP12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 CACNA1SQ13698 1873 aa12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 APLP1P51693 650 aa12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 UBE2HP62256 183 aa12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 CHRNDQ07001 517 aa12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 GJD4Q96KN9 370 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 CNPY2Q9Y2B0 182 aa12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 ZNF804BA4D1E1 1349 aa12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 ZNF532Q9HCE3 1301 aa12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 AP1G2O75843 785 aa12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 MCCD1P59942 119 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 HMGN5P82970 282 aaKnown RBP12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 MAP3K12Q12852 859 aa12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 RASGRF1Q13972 1273 aa12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 TTLL5Q6EMB2 1281 aa12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 C11orf96Q7Z7L8 435 aa12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 ANKRD18AQ8IVF6 992 aa12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 MB21D2Q8IYB1 491 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 ZNF830Q96NB3 372 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 BSDC1Q9NW68 430 aaPredicted RBP12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 NSFL1CQ9UNZ2 370 aaKnown RBP12.4□□□□□ -0.42
APOBEC3D-201ENST00000216099 A0A0G2JLW4 131 aa12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 IDH1O75874 414 aaKnown RBP12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 PHF14O94880 888 aa12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 SCRN1Q12765 414 aa12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 STK3Q13188 491 aa12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 UBE4AQ14139 1066 aa12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 LRSAM1Q6UWE0 723 aa12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 KIF3AQ9Y496 699 aa12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 ELP1O95163 1332 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms