RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 PCP11498 1178 aaKnown RBP21.77■■□□□ 1.08
CTSA-201ENST00000191018 ALDH1B1P30837 517 aa21.77■■□□□ 1.08
CTSA-201ENST00000191018 UBE2HP62256 183 aa21.77■■□□□ 1.08
CTSA-201ENST00000191018 GRIK5Q16478 980 aa21.77■■□□□ 1.08
CTSA-201ENST00000191018 FAM173BQ6P4H8 233 aa21.77■■□□□ 1.08
CTSA-201ENST00000191018 ANO8Q9HCE9 1232 aaPredicted RBP21.77■■□□□ 1.08
CTSA-201ENST00000191018 SMIM22K7EJ46 135 aa21.77■■□□□ 1.08
CTSA-201ENST00000191018 METAP2P50579 478 aaKnown RBP eCLIP21.77■■□□□ 1.08
CTSA-201ENST00000191018 GSTO1P78417 241 aa21.77■■□□□ 1.08
CTSA-201ENST00000191018 RRP12Q5JTH9 1297 aaKnown RBP21.77■■□□□ 1.08
CTSA-201ENST00000191018 RAB11FIP4Q86YS3 637 aa21.77■■□□□ 1.08
CTSA-201ENST00000191018 ELP1O95163 1332 aa21.76■■□□□ 1.07
CTSA-201ENST00000191018 DLEC1Q9Y238 1755 aa21.76■■□□□ 1.07
CTSA-201ENST00000191018 EZH2Q15910 746 aaKnown RBP21.76■■□□□ 1.07
CTSA-201ENST00000191018 SLC15A2Q16348 729 aa21.76■■□□□ 1.07
CTSA-201ENST00000191018 MASTLQ96GX5 879 aa21.76■■□□□ 1.07
CTSA-201ENST00000191018 ECM29Q5VYK3 1845 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 USP17L12C9JPN9 530 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 USP17L21D6R901 530 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 CPLX1O14810 134 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 ZBTB43O43298 467 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 SART3Q15020 963 aaKnown RBP21.75■■□□□ 1.07
CTSA-201ENST00000191018 SBK1Q52WX2 424 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 MSL1Q68DK7 614 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 RGS22Q8NE09 1264 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 ESR2Q92731 530 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 TOMM22Q9NS69 142 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 CDK5RAP2Q96SN8 1893 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 CYP2D7A0A087X1C5 515 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 C6orf229H3BNL8 230 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 MRE11P49959 708 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 PPP4CP60510 307 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 TTC6Q86TZ1 520 aa21.75■■□□□ 1.07
CTSA-201ENST00000191018 ORC3Q9UBD5 711 aaPredicted RBP21.75■■□□□ 1.07
CTSA-201ENST00000191018 MKRN1Q9UHC7 482 aaKnown RBP21.75■■□□□ 1.07
CTSA-201ENST00000191018 FAM205AQ6ZU69 1335 aa21.74■■□□□ 1.07
CTSA-201ENST00000191018 PPFIA3O75145 1194 aa21.74■■□□□ 1.07
CTSA-201ENST00000191018 CDC27P30260 824 aa21.74■■□□□ 1.07
CTSA-201ENST00000191018 ADD1P35611 737 aaKnown RBP21.74■■□□□ 1.07
CTSA-201ENST00000191018 EN1Q05925 392 aaPredicted RBP21.74■■□□□ 1.07
CTSA-201ENST00000191018 NFXL1Q6ZNB6 911 aa21.74■■□□□ 1.07
CTSA-201ENST00000191018 STK11IPQ8N1F8 1099 aa21.74■■□□□ 1.07
CTSA-201ENST00000191018 TMTC2Q8N394 836 aa21.74■■□□□ 1.07
CTSA-201ENST00000191018 FAM217BQ9NTX9 383 aaPredicted RBP21.74■■□□□ 1.07
CTSA-201ENST00000191018 ARPP21Q9UBL0 812 aaPredicted RBP21.74■■□□□ 1.07
CTSA-201ENST00000191018 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.74■■□□□ 1.07
CTSA-201ENST00000191018 SLC12A7Q9Y666 1083 aa21.74■■□□□ 1.07
CTSA-201ENST00000191018 CCDC69A6NI79 296 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 LDHCP07864 332 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 XRCC6P12956 609 aaKnown RBP eCLIP21.73■■□□□ 1.07
CTSA-201ENST00000191018 WTAPQ15007 396 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 NTRK3Q16288 839 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 MICU3Q86XE3 530 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 SCAND2PQ9GZW5 306 aaPredicted RBP21.73■■□□□ 1.07
CTSA-201ENST00000191018 MROH7-TTC4A0A0A0MT08 1334 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 NAV1Q8NEY1 1877 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 CDKL5O76039 1030 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 RCAN1P53805 252 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 SEC23AQ15436 765 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 DIXDC1Q155Q3 683 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 TBC1D22AQ8WUA7 517 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 ZKSCAN3Q9BRR0 538 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 GRPEL1Q9HAV7 217 aa21.73■■□□□ 1.07
CTSA-201ENST00000191018 ERICH2A1L162 156 aa21.72■■□□□ 1.07
CTSA-201ENST00000191018 ORC4O43929 436 aa21.72■■□□□ 1.07
CTSA-201ENST00000191018 RXRAP19793 462 aa21.72■■□□□ 1.07
CTSA-201ENST00000191018 MPNDQ8N594 471 aa21.72■■□□□ 1.07
CTSA-201ENST00000191018 SYAP1Q96A49 352 aaPredicted RBP21.72■■□□□ 1.07
CTSA-201ENST00000191018 RTFDC1Q9BY42 306 aaPredicted RBP21.72■■□□□ 1.07
CTSA-201ENST00000191018 COA1Q9GZY4 146 aa21.72■■□□□ 1.07
CTSA-201ENST00000191018 GOLGA8AA7E2F4 631 aa21.71■■□□□ 1.07
CTSA-201ENST00000191018 BAG3O95817 575 aa21.71■■□□□ 1.07
CTSA-201ENST00000191018 CPLX2Q6PUV4 134 aaKnown RBP21.71■■□□□ 1.07
CTSA-201ENST00000191018 CERS3Q8IU89 383 aa21.71■■□□□ 1.07
CTSA-201ENST00000191018 STK32BQ9NY57 414 aa21.71■■□□□ 1.07
CTSA-201ENST00000191018 FBXO18Q8NFZ0 1043 aa21.71■■□□□ 1.07
CTSA-201ENST00000191018 SH3RF3Q8TEJ3 882 aaPredicted RBP21.71■■□□□ 1.07
CTSA-201ENST00000191018 FAM163AQ96GL9 167 aaPredicted RBP21.71■■□□□ 1.07
CTSA-201ENST00000191018 UBAC1Q9BSL1 405 aa21.71■■□□□ 1.07
CTSA-201ENST00000191018 MYL10Q9BUA6 226 aa21.71■■□□□ 1.07
CTSA-201ENST00000191018 TNKSO95271 1327 aa21.7■■□□□ 1.07
CTSA-201ENST00000191018 FOSBP53539 338 aa21.7■■□□□ 1.06
CTSA-201ENST00000191018 EVX2Q03828 476 aa21.7■■□□□ 1.06
CTSA-201ENST00000191018 MFSD14BQ5SR56 506 aa21.7■■□□□ 1.06
CTSA-201ENST00000191018 OLFM4Q6UX06 510 aa21.7■■□□□ 1.06
CTSA-201ENST00000191018 SYNE3Q6ZMZ3 975 aa21.7■■□□□ 1.06
CTSA-201ENST00000191018 LEO1Q8WVC0 666 aaPredicted RBP21.7■■□□□ 1.06
CTSA-201ENST00000191018 C8orf76Q96K31 380 aa21.7■■□□□ 1.06
CTSA-201ENST00000191018 TFIP11Q9UBB9 837 aaKnown RBP21.7■■□□□ 1.06
CTSA-201ENST00000191018 DDX60LQ5H9U9 1706 aaKnown RBP21.7■■□□□ 1.06
CTSA-201ENST00000191018 GPR75-ASB3A0A0A6YYF3 556 aa21.69■■□□□ 1.06
CTSA-201ENST00000191018 GUCY1B3Q02153 619 aa21.69■■□□□ 1.06
CTSA-201ENST00000191018 ATL3Q6DD88 541 aa21.69■■□□□ 1.06
CTSA-201ENST00000191018 STYK1Q6J9G0 422 aa21.69■■□□□ 1.06
CTSA-201ENST00000191018 DPP8Q6V1X1 898 aaPredicted RBP21.69■■□□□ 1.06
CTSA-201ENST00000191018 ILDR1Q86SU0 546 aaPredicted RBP21.69■■□□□ 1.06
CTSA-201ENST00000191018 C2CD5Q86YS7 1000 aa21.69■■□□□ 1.06
CTSA-201ENST00000191018 CCDC144CPQ8IYA2 1237 aa21.69■■□□□ 1.06
CTSA-201ENST00000191018 SPATA32Q96LK8 384 aa21.69■■□□□ 1.06
CTSA-201ENST00000191018 ZSCAN10Q96SZ4 725 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms