RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 DDX4Q9NQI0 724 aaKnown RBP30.5■■■□□ 2.47
TSR3-201ENST00000007390 ERO1BQ86YB8 467 aa30.49■■■□□ 2.47
TSR3-201ENST00000007390 SH3BP5LQ7L8J4 393 aa30.48■■■□□ 2.47
TSR3-201ENST00000007390 OTUD5Q96G74 571 aa30.48■■■□□ 2.47
TSR3-201ENST00000007390 MCOLN1Q9GZU1 580 aa30.48■■■□□ 2.47
TSR3-201ENST00000007390 IL1RAPL2Q9NP60 686 aa30.48■■■□□ 2.47
TSR3-201ENST00000007390 GPR25O00155 361 aa30.47■■■□□ 2.47
TSR3-201ENST00000007390 RAB11FIP3O75154 756 aa30.47■■■□□ 2.47
TSR3-201ENST00000007390 GTF2A2P52657 109 aa30.47■■■□□ 2.47
TSR3-201ENST00000007390 DGKZQ13574 1117 aa30.47■■■□□ 2.47
TSR3-201ENST00000007390 OTUD7BQ6GQQ9 843 aa30.47■■■□□ 2.47
TSR3-201ENST00000007390 NAA16Q6N069 864 aaPredicted RBP30.47■■■□□ 2.47
TSR3-201ENST00000007390 DOCK2Q92608 1830 aa30.46■■■□□ 2.47
TSR3-201ENST00000007390 INPP5BP32019 993 aa30.46■■■□□ 2.47
TSR3-201ENST00000007390 MAP3K10Q02779 954 aa30.46■■■□□ 2.47
TSR3-201ENST00000007390 CLASRPQ8N2M8 674 aaKnown RBP30.46■■■□□ 2.47
TSR3-201ENST00000007390 ZNF296Q8WUU4 475 aaPredicted RBP30.46■■■□□ 2.47
TSR3-201ENST00000007390 PTPN18Q99952 460 aa30.46■■■□□ 2.47
TSR3-201ENST00000007390 PIH1D3Q9NQM4 214 aaKnown RBP30.46■■■□□ 2.47
TSR3-201ENST00000007390 COL2A1P02458 1487 aaPredicted RBP30.45■■■□□ 2.47
TSR3-201ENST00000007390 PPIL2Q13356 520 aa30.45■■■□□ 2.47
TSR3-201ENST00000007390 PICALMQ13492 652 aa30.45■■■□□ 2.47
TSR3-201ENST00000007390 NOL9Q5SY16 702 aaKnown RBP30.45■■■□□ 2.47
TSR3-201ENST00000007390 ZSCAN29Q8IWY8 852 aaPredicted RBP30.45■■■□□ 2.47
TSR3-201ENST00000007390 BRI3BPQ8WY22 251 aa30.45■■■□□ 2.47
TSR3-201ENST00000007390 R3HDMLQ9H3Y0 253 aa30.45■■■□□ 2.47
TSR3-201ENST00000007390 AK9Q5TCS8 1911 aa30.45■■■□□ 2.46
TSR3-201ENST00000007390 DDTLA6NHG4 134 aaPredicted RBP30.44■■■□□ 2.46
TSR3-201ENST00000007390 NOL10Q9BSC4 688 aaKnown RBP30.44■■■□□ 2.46
TSR3-201ENST00000007390 CCL15-CCL14A0A0B4J2E2 113 aa30.43■■■□□ 2.46
TSR3-201ENST00000007390 BAG3O95817 575 aa30.43■■■□□ 2.46
TSR3-201ENST00000007390 PPP4CP60510 307 aa30.43■■■□□ 2.46
TSR3-201ENST00000007390 PPATQ06203 517 aa30.43■■■□□ 2.46
TSR3-201ENST00000007390 CCL15Q16663 113 aa30.43■■■□□ 2.46
TSR3-201ENST00000007390 CTU1Q7Z7A3 348 aaKnown RBP30.43■■■□□ 2.46
TSR3-201ENST00000007390 APBB1O00213 710 aa30.42■■■□□ 2.46
TSR3-201ENST00000007390 PLCG2P16885 1265 aa30.42■■■□□ 2.46
TSR3-201ENST00000007390 PHF20L1A8MW92 1017 aa30.41■■■□□ 2.46
TSR3-201ENST00000007390 IRF6O14896 467 aa30.41■■■□□ 2.46
TSR3-201ENST00000007390 TMED8Q6PL24 325 aaPredicted RBP30.41■■■□□ 2.46
TSR3-201ENST00000007390 ADGRA1Q86SQ6 560 aa30.41■■■□□ 2.46
TSR3-201ENST00000007390 TEX11Q8IYF3 940 aa30.41■■■□□ 2.46
TSR3-201ENST00000007390 FKTNO75072 461 aa30.4■■■□□ 2.46
TSR3-201ENST00000007390 CETPP11597 493 aa30.4■■■□□ 2.46
TSR3-201ENST00000007390 SNAPC2Q13487 334 aa30.4■■■□□ 2.46
TSR3-201ENST00000007390 SH3RF3Q8TEJ3 882 aaPredicted RBP30.4■■■□□ 2.46
TSR3-201ENST00000007390 OSBPL5Q9H0X9 879 aaPredicted RBP30.4■■■□□ 2.46
TSR3-201ENST00000007390 AATFQ9NY61 560 aaKnown RBP eCLIP30.4■■■□□ 2.46
TSR3-201ENST00000007390 IFIT2P09913 472 aaKnown RBP30.39■■■□□ 2.46
TSR3-201ENST00000007390 CRHR2Q13324 411 aa30.39■■■□□ 2.46
TSR3-201ENST00000007390 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.39■■■□□ 2.46
TSR3-201ENST00000007390 MYO5AQ9Y4I1 1855 aaKnown RBP30.38■■■□□ 2.45
TSR3-201ENST00000007390 TBC1D12O60347 775 aa30.38■■■□□ 2.45
TSR3-201ENST00000007390 IDH1O75874 414 aaKnown RBP30.38■■■□□ 2.45
TSR3-201ENST00000007390 ZCCHC17Q9NP64 241 aaKnown RBP30.38■■■□□ 2.45
TSR3-201ENST00000007390 NDUFB9Q9Y6M9 179 aa30.38■■■□□ 2.45
TSR3-201ENST00000007390 RRP1P56182 461 aaKnown RBP30.37■■■□□ 2.45
TSR3-201ENST00000007390 SCYL3Q8IZE3 742 aa30.37■■■□□ 2.45
TSR3-201ENST00000007390 ANTXR1Q9H6X2 564 aa30.37■■■□□ 2.45
TSR3-201ENST00000007390 KCNH4Q9UQ05 1017 aa30.37■■■□□ 2.45
TSR3-201ENST00000007390 CYP7A1P22680 504 aa30.36■■■□□ 2.45
TSR3-201ENST00000007390 MAP3K12Q12852 859 aa30.36■■■□□ 2.45
TSR3-201ENST00000007390 CERS3Q8IU89 383 aa30.36■■■□□ 2.45
TSR3-201ENST00000007390 FAM43AQ8N2R8 423 aa30.36■■■□□ 2.45
TSR3-201ENST00000007390 TTF1Q15361 905 aaPredicted RBP30.35■■■□□ 2.45
TSR3-201ENST00000007390 PKN2Q16513 984 aaKnown RBP30.35■■■□□ 2.45
TSR3-201ENST00000007390 CTNND1O60716 968 aaKnown RBP30.34■■■□□ 2.45
TSR3-201ENST00000007390 YTHDC1Q96MU7 727 aaKnown RBP30.34■■■□□ 2.45
TSR3-201ENST00000007390 LRRCC1Q9C099 1032 aa30.34■■■□□ 2.45
TSR3-201ENST00000007390 SLURP2P0DP57 97 aa30.33■■■□□ 2.45
TSR3-201ENST00000007390 TAF1CQ15572 869 aaPredicted RBP30.33■■■□□ 2.45
TSR3-201ENST00000007390 MAGEB6Q8N7X4 407 aa30.33■■■□□ 2.45
TSR3-201ENST00000007390 DHX36Q9H2U1 1008 aaKnown RBP30.33■■■□□ 2.45
TSR3-201ENST00000007390 PICK1Q9NRD5 415 aa30.33■■■□□ 2.45
TSR3-201ENST00000007390 FLT1P17948 1338 aa30.32■■■□□ 2.44
TSR3-201ENST00000007390 BTBD19C9JJ37 291 aa30.32■■■□□ 2.44
TSR3-201ENST00000007390 ZFYVE28Q9HCC9 887 aa30.32■■■□□ 2.44
TSR3-201ENST00000007390 CXCL11O14625 94 aa30.31■■■□□ 2.44
TSR3-201ENST00000007390 PTPRAP18433 802 aa30.31■■■□□ 2.44
TSR3-201ENST00000007390 TGFBRAP1Q8WUH2 860 aa30.31■■■□□ 2.44
TSR3-201ENST00000007390 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.31■■■□□ 2.448e-10■■■■□ 26.3
TSR3-201ENST00000007390 HERC5Q9UII4 1024 aaKnown RBP30.31■■■□□ 2.44
TSR3-201ENST00000007390 FOCADQ5VW36 1801 aa30.31■■■□□ 2.44
TSR3-201ENST00000007390 CCDC85CA6NKD9 419 aa30.3■■■□□ 2.44
TSR3-201ENST00000007390 DYNLL1P63167 89 aaKnown RBP30.3■■■□□ 2.44
TSR3-201ENST00000007390 MAPKAPK5Q8IW41 473 aa30.3■■■□□ 2.44
TSR3-201ENST00000007390 DCTPP1Q9H773 170 aa30.3■■■□□ 2.44
TSR3-201ENST00000007390 PI4KBQ9UBF8 816 aa30.3■■■□□ 2.44
TSR3-201ENST00000007390 DOCK1Q14185 1865 aa30.29■■■□□ 2.44
TSR3-201ENST00000007390 ATP5JP18859 108 aa30.29■■■□□ 2.44
TSR3-201ENST00000007390 MOGSQ13724 837 aa30.29■■■□□ 2.44
TSR3-201ENST00000007390 ANKRD23Q86SG2 305 aa30.29■■■□□ 2.44
TSR3-201ENST00000007390 ERO1AQ96HE7 468 aa30.29■■■□□ 2.44
TSR3-201ENST00000007390 ZHX2Q9Y6X8 837 aa30.29■■■□□ 2.44
TSR3-201ENST00000007390 CDK5RAP2Q96SN8 1893 aa30.29■■■□□ 2.44
TSR3-201ENST00000007390 FAM196BA6NMK8 535 aa30.28■■■□□ 2.44
TSR3-201ENST00000007390 MIGA1Q8NAN2 632 aa30.28■■■□□ 2.44
TSR3-201ENST00000007390 DNAJC2Q99543 621 aaKnown RBP30.28■■■□□ 2.44
TSR3-201ENST00000007390 GOLIM4O00461 696 aa30.27■■■□□ 2.44
TSR3-201ENST00000007390 SP3Q02447 781 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms