RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Cdc23Q8BGZ4 597 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Aldh1l2Q8K009 923 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Catsper1Q91ZR5 686 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Cdk5rap3Q99LM2 503 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 AatfQ9JKX4 526 aaKnown RBP10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Gm14025A2AP89 1413 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Lmnb2P21619 596 aaKnown RBP10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Tdo2P48776 406 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Gm1604bQ3TRG0 118 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Nucks1Q80XU3 234 aaKnown RBP10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Cep85Q8BMK0 761 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Nek11Q8C0Q4 628 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Rsad2Q8CBB9 362 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Taco1Q8K0Z7 294 aaKnown RBP10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Hexim1Q8R409 356 aaKnown RBP10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Wdr46Q9Z0H1 622 aaKnown RBP10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Card6E9PWH2 1175 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Pak1O88643 545 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Traf1P39428 409 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 PhbP67778 272 aaKnown RBP10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Klhl29Q80T74 875 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Fam160b2Q80YR2 744 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ppp2r2cQ8BG02 447 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Klhl7Q8BUL5 586 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Nlrp3Q8R4B8 1033 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ttc5Q99LG4 440 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Fam133bQ9CVI2 245 aaKnown RBP10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Zcchc8Q9CYA6 709 aaKnown RBP10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Drc3Q9D5E4 523 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Grin2bQ01097 1482 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ppip5k1A2ARP1 1436 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Fam135bQ9DAI6 1403 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Myo1aO88329 1043 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Spg7Q3ULF4 781 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ccdc82Q6PG04 518 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Lrrc8aQ80WG5 810 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ccdc50Q810U5 305 aaKnown RBP10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Eif2b5Q8CHW4 717 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Eif3bQ8JZQ9 803 aaKnown RBP10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Trim16Q99PP9 556 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Fsip1Q9D3V5 435 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 PdclQ9DBX2 301 aa10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Dhx9O70133 1380 aaKnown RBP10.1□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Zbtb21E9Q444 1094 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Stk10O55098 966 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ess2O70279 479 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Map3k10Q66L42 940 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Rassf6Q80UQ2 353 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Stk11Q9WTK7 436 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Kcnh3Q9WVJ0 1095 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 A630010A05RikA9C473 232 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 DlatQ8BMF4 642 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Tmem60Q8K174 133 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Atxn3Q9CVD2 355 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Cyp27a1Q9DBG1 533 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Gipc1Q9Z0G0 333 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Polr3aB2RXC6 1390 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Atp8b2P98199 1209 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Uspl1Q3ULM6 1089 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Trim37Q6PCX9 961 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Prune1Q8BIW1 454 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Cnot6lQ8VEG6 555 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Acsbg1Q99PU5 721 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Rdm1Q9CQK3 281 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Slc8a3S4R2P9 928 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Camsap2Q8C1B1 1461 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Sbno1Q689Z5 1390 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Izumo3A6PWV3 263 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Usp5P56399 858 aaKnown RBP10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Pdrg1P59048 133 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Arl1P61211 181 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Gucy2fQ5SDA5 1108 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Rbm12b2Q66JV4 834 aaKnown RBP10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Trim60Q8VI40 466 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Kcnh5Q920E3 988 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 HgsQ99LI8 775 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Cc2d2aQ8CFW7 1633 aa10.09□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Rbbp8nlA2ABX0 614 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Zkscan16A2ALW2 728 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Gm6121L7MUF1 212 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Krt13P08730 437 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Olfm3P63056 478 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 MpndQ3TV65 487 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Ltv1Q6NSQ7 470 aaKnown RBP10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 FanclQ9CR14 375 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 RpainQ9CWY9 219 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Utp11Q9CZJ1 253 aaKnown RBP10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Echdc1Q9D9V3 322 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Col4a3bpQ9EQG9 624 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 1700017N19RikA0A087WPJ1 469 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Faf1P54731 649 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Mcm7Q61881 719 aaKnown RBP10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Rtn1Q8K0T0 780 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Terf2ipQ91VL8 393 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Rabep2Q91WG2 554 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Slc13a1Q9JHI4 594 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 MefvQ9JJ26 767 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Dnajc25A2ALW5 357 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Ttll7A4Q9F0 912 aa10.08□□□□□ -0.8
Ptpre-204ENSMUST00000209979 Parp10Q8CIE4 960 aa10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms