RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Ddx17Q501J6 650 aaKnown RBP10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ccdc57Q6PHN1 1016 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Gigyf2Q6Y7W8 1291 aaKnown RBP10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Phkg2Q9DB30 406 aa10.34□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Palm3A2TJV2 734 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Speer4aF8VPX6 267 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ppp1r9aH3BJD6 1292 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ube3aO08759 870 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 CrklP47941 303 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Specc1lQ2KN98 1118 aaKnown RBP10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Yeats4Q9CR11 227 aaKnown RBP10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Prl3d2F6R3P9 224 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Hspa2P17156 633 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Csrnp1P59054 583 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Desi2Q9D291 194 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Pdcd11Q6NS46 1862 aaKnown RBP10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Znf521Q6KAS7 1311 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 PzpQ61838 1495 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 EngaseQ8BX80 734 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Synpo2Q91YE8 1087 aaKnown RBP10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gtpbp4Q99ME9 634 aaKnown RBP10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Appbp2Q9DAX9 585 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 1700113H08RikE9Q9Q5 327 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Nxf7Q80SZ6 620 aaKnown RBP10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ublcp1Q8BGR9 318 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Kif2cQ922S8 721 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Tfcp2Q9ERA0 502 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Pfkfb1P70266 471 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Mdh1bQ5F204 500 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Foxp4Q9DBY0 795 aaKnown RBP10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Nfe2l3Q9WTM4 660 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Camk4P08414 469 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Tekt3Q6X6Z7 490 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 RubcnQ80U62 956 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Iffo1Q8BXL9 562 aa10.33□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Cops6O88545 324 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 DesP31001 469 aaKnown RBP10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gas8Q60779 478 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Mcm7Q61881 719 aaKnown RBP10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Mrpl50Q8VDT9 159 aaKnown RBP10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Pcdhb22Q91XZ8 794 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Abcc3B2RX12 1523 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Cyp26a1O55127 497 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 MpndQ3TV65 487 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Sorbs3Q9R1Z8 733 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gm7347D3YYI9 267 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Zfp113Q8C689 439 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gsta4P24472 222 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Irf5P56477 497 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Kif22Q3V300 660 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Sdccag8Q80UF4 717 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Pde5aQ8CG03 865 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 NapgQ9CWZ7 312 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gle1Q8R322 699 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ncoa5Q91W39 579 aaKnown RBP10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Syap1Q9D5V6 365 aa10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Akap8Q9DBR0 687 aaKnown RBP10.32□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Cyp2j7A0A140T8U1 504 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Exoc3l2D3YUP5 789 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Mettl14Q3UIK4 456 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Itga6Q61739 1091 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Zrsr1Q64707 428 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ccdc6D3YZP9 469 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Tmed1Q3V009 227 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Calml4Q91WQ9 153 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ubxn1Q922Y1 297 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Cetn2Q9R1K9 172 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Tubgcp2Q921G8 905 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Haus2Q9CQS9 234 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 CpvlQ9D3S9 478 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gnat2P50149 354 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Krt79Q8VED5 531 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Prr16A3KMN5 304 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 PparaP23204 468 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Csrnp2Q8BGQ2 534 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Irs4Q9Z0Y7 1216 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Setdb1O88974 1307 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Hspd1P63038 573 aaKnown RBP10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Prpf31Q8CCF0 499 aaKnown RBP10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Mx2Q9WVP9 655 aa10.31□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Nfil3O08750 462 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Cdcp1Q5U462 833 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Uba5Q8VE47 403 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Adgrl3Q80TS3 1537 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 ZfxP17012 799 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Tsta3P23591 321 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ttc27Q8CD92 847 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ubac1Q8VDI7 409 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Tsnaxip1Q99P25 704 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Tmco5aQ9D9D5 303 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Atp10aO54827 1508 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Akap2O54931 893 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Lnx1O70263 728 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ncf1Q09014 390 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gpr162Q3UN16 588 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Prpf40bQ80W14 870 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Olfm5Q8BU90 496 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Hecw1Q8K4P8 1604 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Kdm1aQ6ZQ88 853 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gimap8Q75N62 688 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms